BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0144.0036.p (240 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001990151.1| hypothetical protein Rpal_1134 [Rhodopseudom... 447 e-124 ref|ZP_08627061.1| protein of unknown function DUF159 [Bradyrhiz... 442 e-122 ref|YP_001992782.1| hypothetical protein Rpal_3808 [Rhodopseudom... 420 e-116 ref|YP_570759.1| hypothetical protein RPD_3635 [Rhodopseudomonas... 367 e-100 ref|YP_003693227.1| hypothetical protein Snov_1295 [Starkeya nov... 332 3e-89 >ref|YP_001990151.1| hypothetical protein Rpal_1134 [Rhodopseudomonas palustris TIE-1] gb|ACE99675.1| protein of unknown function DUF159 [Rhodopseudomonas palustris TIE-1] Length = 241 Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust. Identities = 212/235 (90%), Positives = 225/235 (95%) Query: 1 MCNLYSITTNQAAISALFRVVNRYVGNLAPMPGVFPDYKAPIVRNGVDGRELAIARWGMP 60 MCNLYSITTNQAAISALFR+VNRYVGNLAPMPGVFPDYKAPIVR GV+GRELA ARWGMP Sbjct: 1 MCNLYSITTNQAAISALFRIVNRYVGNLAPMPGVFPDYKAPIVRTGVEGRELATARWGMP 60 Query: 61 SSGQALLQATKKRAEKLQAKGTSVDFKELLRMEPDGGTTNIRNVKSKHWTRWLGVENRCV 120 SS +AL+ ATKKRAEKLQAKG +VDFKELLRMEPDGGTT+IRNVKSKHWTRWLG E+RCV Sbjct: 61 SSSKALMDATKKRAEKLQAKGKTVDFKELLRMEPDGGTTSIRNVKSKHWTRWLGPEHRCV 120 Query: 121 VPFNSFSEFNKAEGGDIWFALDESRPLACFAGIWTNWTSVRKVKEGETTNDLYAFLTTEA 180 VPFNSFSEFNKAEGGDIWFALDE+RPLACFAGIWTNWTSVRKVKEGETTNDLYAFLTTE Sbjct: 121 VPFNSFSEFNKAEGGDIWFALDETRPLACFAGIWTNWTSVRKVKEGETTNDLYAFLTTEP 180 Query: 181 NAEVFAIHPKAMPVILTTPDEVETWMTAPPDEALRLQRPLSDGTLKIVARGVKED 235 +AEV AIHPKAMPVILTTPDE++TWMTAP DEAL+LQRPL DGTL+IVARGVKED Sbjct: 181 SAEVSAIHPKAMPVILTTPDEIDTWMTAPADEALKLQRPLPDGTLRIVARGVKED 235 >ref|ZP_08627061.1| protein of unknown function DUF159 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP10341.1| protein of unknown function DUF159 [Bradyrhizobiaceae bacterium SG-6C] Length = 241 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 212/235 (90%), Positives = 219/235 (93%) Query: 1 MCNLYSITTNQAAISALFRVVNRYVGNLAPMPGVFPDYKAPIVRNGVDGRELAIARWGMP 60 MCNLY ITTNQAAI ALFRVVNRYVGNL PMPGVFPDYKAPIVRNG +GRELA ARWGMP Sbjct: 1 MCNLYPITTNQAAIIALFRVVNRYVGNLEPMPGVFPDYKAPIVRNGAEGRELATARWGMP 60 Query: 61 SSGQALLQATKKRAEKLQAKGTSVDFKELLRMEPDGGTTNIRNVKSKHWTRWLGVENRCV 120 SS +AL+ ATKKRAEKLQAKG +VDFKELLRMEPDGGTTNIRNVKSKHWTRWLG ENRCV Sbjct: 61 SSSKALMDATKKRAEKLQAKGKTVDFKELLRMEPDGGTTNIRNVKSKHWTRWLGAENRCV 120 Query: 121 VPFNSFSEFNKAEGGDIWFALDESRPLACFAGIWTNWTSVRKVKEGETTNDLYAFLTTEA 180 VPFNSFSEFNK EGGDIWFA DE RPLACFAGIWTNWTSVRKVKEGETTNDLYAFLTTE Sbjct: 121 VPFNSFSEFNKTEGGDIWFAFDEERPLACFAGIWTNWTSVRKVKEGETTNDLYAFLTTEP 180 Query: 181 NAEVFAIHPKAMPVILTTPDEVETWMTAPPDEALRLQRPLSDGTLKIVARGVKED 235 NAEV AIHPKAMPVILTTPDEVE WMTAP DEAL+LQRPL+DGTL+IVARGVKED Sbjct: 181 NAEVGAIHPKAMPVILTTPDEVEAWMTAPLDEALKLQRPLADGTLRIVARGVKED 235 >ref|YP_001992782.1| hypothetical protein Rpal_3808 [Rhodopseudomonas palustris TIE-1] gb|ACF02307.1| protein of unknown function DUF159 [Rhodopseudomonas palustris TIE-1] Length = 246 Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust. Identities = 199/235 (84%), Positives = 216/235 (91%) Query: 1 MCNLYSITTNQAAISALFRVVNRYVGNLAPMPGVFPDYKAPIVRNGVDGRELAIARWGMP 60 MCNLYSITTNQAAI ALFRVVN++VGNLAPMPGVFPDYKAPI+R G DGREL ARWGMP Sbjct: 2 MCNLYSITTNQAAIIALFRVVNQHVGNLAPMPGVFPDYKAPIIRTGPDGRELVTARWGMP 61 Query: 61 SSGQALLQATKKRAEKLQAKGTSVDFKELLRMEPDGGTTNIRNVKSKHWTRWLGVENRCV 120 SS +ALL A +KRA+KL+AKG +VDF E+LRMEPDGGTTNIRNVKSKHWTRWLG E+RC+ Sbjct: 62 SSAKALLDAAQKRADKLRAKGKTVDFNEVLRMEPDGGTTNIRNVKSKHWTRWLGPEHRCI 121 Query: 121 VPFNSFSEFNKAEGGDIWFALDESRPLACFAGIWTNWTSVRKVKEGETTNDLYAFLTTEA 180 VPFNSFSEFNKAEGGDIWFALDESRPLACFAGIWTNWTSVRK+KEGETTNDLYAFLTTE Sbjct: 122 VPFNSFSEFNKAEGGDIWFALDESRPLACFAGIWTNWTSVRKMKEGETTNDLYAFLTTEP 181 Query: 181 NAEVFAIHPKAMPVILTTPDEVETWMTAPPDEALRLQRPLSDGTLKIVARGVKED 235 NAEV AIHPKAMPVILTTP EVETW++ P +EALRLQRPL DG L+IVARG K+D Sbjct: 182 NAEVGAIHPKAMPVILTTPAEVETWLSTPQEEALRLQRPLPDGALRIVARGAKKD 236 >ref|YP_570759.1| hypothetical protein RPD_3635 [Rhodopseudomonas palustris BisB5] gb|ABE40858.1| protein of unknown function DUF159 [Rhodopseudomonas palustris BisB5] Length = 241 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 176/235 (74%), Positives = 194/235 (82%) Query: 1 MCNLYSITTNQAAISALFRVVNRYVGNLAPMPGVFPDYKAPIVRNGVDGRELAIARWGMP 60 MCNLYS+T NQAAI LF+V VGNL MPG+FPDY APIVRN GREL +ARWGMP Sbjct: 1 MCNLYSMTKNQAAIRNLFKVDTDSVGNLPSMPGIFPDYPAPIVRNIDGGRELKMARWGMP 60 Query: 61 SSGQALLQATKKRAEKLQAKGTSVDFKELLRMEPDGGTTNIRNVKSKHWTRWLGVENRCV 120 SS +AL+ AT KRA KL+AKG DFKELLRMEPD GTTNIRN SKHW RWLGVENRC+ Sbjct: 61 SSSKALMDATAKRAAKLEAKGKQFDFKELLRMEPDSGTTNIRNTSSKHWKRWLGVENRCI 120 Query: 121 VPFNSFSEFNKAEGGDIWFALDESRPLACFAGIWTNWTSVRKVKEGETTNDLYAFLTTEA 180 VP +SFSEFNK GGDIWFALDESRPL CFAG+WTNWTSVRKV+EGETTND++AFLTTE Sbjct: 121 VPMSSFSEFNKEAGGDIWFALDESRPLVCFAGMWTNWTSVRKVREGETTNDIFAFLTTEP 180 Query: 181 NAEVFAIHPKAMPVILTTPDEVETWMTAPPDEALRLQRPLSDGTLKIVARGVKED 235 NAEV AIHPKAMPVILTTP+ V+ W+ AP DEA LQR L DG L+IVARG K+D Sbjct: 181 NAEVGAIHPKAMPVILTTPEAVDVWLRAPWDEAKALQRALPDGALRIVARGAKKD 235 >ref|YP_003693227.1| hypothetical protein Snov_1295 [Starkeya novella DSM 506] gb|ADH88608.1| protein of unknown function DUF159 [Starkeya novella DSM 506] Length = 246 Score = 332 bits (851), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 164/238 (68%), Positives = 182/238 (76%), Gaps = 1/238 (0%) Query: 1 MCNLYSITTNQAAISALFRVVNRYVGNLAPMPGVFPDYKAPIVRNGVDG-RELAIARWGM 59 MCNLYS T+N AI L + GNLAP G++PDY APIVR G D REL +ARWGM Sbjct: 1 MCNLYSHTSNVEAIRDLVGALRNLSGNLAPQTGIYPDYPAPIVRTGADDERELVMARWGM 60 Query: 60 PSSGQALLQATKKRAEKLQAKGTSVDFKELLRMEPDGGTTNIRNVKSKHWTRWLGVENRC 119 PSS +AL AT+ RA KLQAKG VDFKELLR+EPD GTTNIRNVKS+HW RWL E+RC Sbjct: 61 PSSSEALFAATRNRAAKLQAKGRMVDFKELLRLEPDSGTTNIRNVKSRHWQRWLEPEHRC 120 Query: 120 VVPFNSFSEFNKAEGGDIWFALDESRPLACFAGIWTNWTSVRKVKEGETTNDLYAFLTTE 179 +VP SFSEFNK GG+IWFALD+SRPLA FAG+WTNWTSVRKV+EGE T D+Y FLTTE Sbjct: 121 LVPLTSFSEFNKDSGGNIWFALDDSRPLAFFAGLWTNWTSVRKVREGEVTCDVYGFLTTE 180 Query: 180 ANAEVFAIHPKAMPVILTTPDEVETWMTAPPDEALRLQRPLSDGTLKIVARGVKEDPA 237 NA V IHPKAMPVILTT +E E W+ AP EA LQRPL D L IVARG KEDPA Sbjct: 181 PNAVVAPIHPKAMPVILTTAEEREVWLRAPWSEACALQRPLPDDALTIVARGAKEDPA 238