BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0144.0032.p (513 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002375672.1| hypothetical protein PCC7424_0336 [Cyanothec... 164 3e-38 ref|YP_003885635.1| RecB family nuclease, putative [Cyanothece s... 160 6e-37 ref|YP_002484035.1| hypothetical protein Cyan7425_3349 [Cyanothe... 159 9e-37 ref|YP_001865015.1| hypothetical protein Npun_R1363 [Nostoc punc... 148 2e-33 ref|YP_172752.1| hypothetical protein syc2042_d [Synechococcus e... 144 4e-32 >ref|YP_002375672.1| hypothetical protein PCC7424_0336 [Cyanothece sp. PCC 7424] gb|ACK68804.1| conserved hypothetical protein [Cyanothece sp. PCC 7424] Length = 487 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 145/504 (28%), Positives = 231/504 (45%), Gaps = 63/504 (12%) Query: 23 MKVTASMLYDLVECPRRVLLDLFGDPSRRDESAAFVRLMWERGARFERETIAKLRVPFLD 82 M +T ++L D C RR L+ +GDP+++D F + + ++ +A+L P+ Sbjct: 1 MLLTDALLLDYKRCQRRAFLNRYGDPTQKDPKRDFYLKLRQESEIHIQKVLAEL-YPYYH 59 Query: 83 LSNAAEADKE--GLTMQAMAEGAPLIYGGRIGA-------DD---LVGMPDLLRRVPG-- 128 +A K+ T M++G IY G + DD LVG+P+LL + PG Sbjct: 60 QPSATLGWKQRAQETEALMSQGVDCIYKGVLFQTVSDFIPDDSLTLVGLPNLLIKSPGQS 119 Query: 129 -----GYMASDVKSGRGKEGGDDGREGRLKLSYAVQLASYVDILERLGHSAGRRALVL-- 181 Y ++ GR R K Y + +A Y +L +S A ++ Sbjct: 120 KFGEWTYRPISIQLGR-----------RPKPEYKIIVAYYAYLLSLTQYSLPSTAQLILR 168 Query: 182 DVRGDEVEYDFAGSQSGRKLWGRYEEALADARSILAGRTVPLPAYCGA-CKLCHWYTVCL 240 ++ +VE G L + + + + L R P C LCHWY+ C Sbjct: 169 PIKTYDVEL-------GTWL-PKVRDIILECVPTLDHRQEPEVFISRQRCSLCHWYSHCY 220 Query: 241 GQLESADDLTLIAGLRRSDRDGMRER-IPSIADFAAVDPGEFISGKKTVFRGIGADRLRA 299 +S L+L+ G+ S + ++ I S+ A P K G+ Sbjct: 221 TLAQSQQHLSLVPGVTPSRYESLQTLGIDSVVSLANASPA-----KMGELMGLDIANQLQ 275 Query: 300 LHARAALLKRPDPKPYL--RTPVSLPICSVELFFDVEVDPGRDVVYLHGVL--ERQGSDE 355 L A++ + R K +L V +P SVEL+FD+E +P +V YL G+L +R + + Sbjct: 276 LQAQSIVQNRAFSKEHLSRNYQVFIPSASVELYFDIEAEPELNVDYLLGILLVDRPQNLK 335 Query: 356 RYVSFFADEPTPAAERDAFAAALAYFADRRDARTHYYSKYERSTYRRLQRKY--PQVCSP 413 ++ FFA++P E+ + + + + + +A +YS+YE T +RL Y PQ Sbjct: 336 QFYPFFAEKP--EDEKIIWLSFITFVNNYPNAPIFHYSEYEVETIKRLANLYHTPQ---- 389 Query: 414 EEVERLFDPARAVDLYGDVVMKATEWPTRDRSIKTLARYLGFSWRDPNPSGAASIEWYDR 473 E++E L D R VDL+ V+ + P S+K+LA +LGF WRDP SG + WYD+ Sbjct: 390 EQLESLLD--RCVDLHKQVI-NSVFLPVESYSLKSLANWLGFQWRDPGVSGDQCVCWYDQ 446 Query: 474 WCTHRTPELKQRILNYNQDDCCAT 497 W T L IL YN+DDC AT Sbjct: 447 WLTTGDRNLLDSILRYNEDDCWAT 470 >ref|YP_003885635.1| RecB family nuclease, putative [Cyanothece sp. PCC 7822] gb|ADN12360.1| RecB family nuclease, putative [Cyanothece sp. PCC 7822] Length = 490 Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 145/511 (28%), Positives = 235/511 (45%), Gaps = 77/511 (15%) Query: 23 MKVTASMLYDLVECPRRVLLDLFGDPSRRD-ESAAFVRLMWERGARFERETIAKL----- 76 M +T ++L D C RR L+ +GDPS++D E F++L E + +++L Sbjct: 1 MLLTDALLLDYKRCQRRAFLNRYGDPSQQDPERDFFIKLRQESQNHIAK-VLSELYPHAQ 59 Query: 77 RVP-FLDLSNAAEADKEGLTMQAMAEGAPLIYGGRIGADD----------LVGMPDLLRR 125 R+P AEA T MA+G I+ G + + LVG P LL + Sbjct: 60 RLPDIFPWKERAEA-----TETLMAQGVECIHKGVLFHETQDFLTQETITLVGKPHLLVK 114 Query: 126 VPGG-------YMASDVKSGRGKEGGDDGREGRLKLSYAVQLASYVDILERL-GHSAGRR 177 G Y+ ++ GR R K Y + A Y +L+ + G Sbjct: 115 SIGQSKFGNWMYIPISIQLGR-----------RPKPEYKILAAYYAYLLDFIQGTLPPNA 163 Query: 178 ALVL-DVRGDEVEYDFAGSQSGRKLW-GRYEEALADARSILAGRTVPLPAYCGA-CKLCH 234 L+L ++ EVE + +W + +A+ + +L R P C LCH Sbjct: 164 QLILRPLKTYEVELE---------IWMPKVLDAITECLQMLHQRQEPEVFISRQRCSLCH 214 Query: 235 WYTVCLGQLESADDLTLIAGLRRSDRDGMR----ERIPSIADFAAVDPGEFISGKKTVFR 290 WYT C +S L+L+ G+ S + ++ + + S+A+ + + GE I + V Sbjct: 215 WYTHCYTLAQSQQHLSLVPGVTPSRYESLQTLGVDSVASLANTSVLHVGELIGLE--VAT 272 Query: 291 GIGADRLRALHARAALLKRPDPKPYLRTPVSLPICSVELFFDVEVDPGRDVVYLHGVL-- 348 + L RA ++R + P + +P S+EL+FD+E +P +V YL G+L Sbjct: 273 QLQQQAQSILENRA--IRRANSPP--NKQIIIPTASIELYFDIEAEPELNVDYLLGILLV 328 Query: 349 ERQGSDERYVSFFADEPTPAAERDAFAAALAYFADRRDARTHYYSKYERSTYRRLQRKY- 407 RQ + +++ F A++P E+ + + + + +A +YS+YE T +RL Y Sbjct: 329 NRQENTQQFYPFLAEQP--EEEKSIWLSFVTFMNHYPEAPIFHYSEYEVETIKRLANLYG 386 Query: 408 -PQVCSPEEVERLFDPARAVDLYGDVVMKATEWPTRDRSIKTLARYLGFSWRDPNPSGAA 466 PQ +++E L +R DL+ V+ T +P S+K+LA +LGF WRD SG Sbjct: 387 TPQ----KQLENLL--SRCTDLHKQVINSVT-FPVESYSLKSLANWLGFQWRDAGISGDQ 439 Query: 467 SIEWYDRWCTHRTPELKQRILNYNQDDCCAT 497 + WYD+W T L IL YN+DDC AT Sbjct: 440 CVCWYDQWLTTGDRSLLDAILRYNEDDCWAT 470 >ref|YP_002484035.1| hypothetical protein Cyan7425_3349 [Cyanothece sp. PCC 7425] gb|ACL45674.1| conserved hypothetical protein [Cyanothece sp. PCC 7425] Length = 512 Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 137/509 (26%), Positives = 222/509 (43%), Gaps = 61/509 (11%) Query: 23 MKVTASMLYDLVECPRRVLLDLFGDPSRRDESAAFVRLMWERGARFERETIAKLR----- 77 M +TA +L + C RR L+++GDP ++ + F+ + + ++ +A+ Sbjct: 1 MLITAQLLLNFQRCARRAFLEVYGDPEQKIPPSDFLLKLAQDSQAHQQMVLAEQDWVQPI 60 Query: 78 VPFLDLSNAAEADKEGLTMQAMAEGAPLIYGGRI---GADDL-VGMPDLLRRVPGG---- 129 P D A+A T++ M +G IY G + ADDL V PDLL R PG Sbjct: 61 YPKGDWKAGAQA-----TLELMQQGVEQIYQGVLLVEEADDLMVSTPDLLTRQPGLSNFG 115 Query: 130 ---YMASDVKSGRGKEGGDDGREGRLKLSYAVQLASYVDILERLGHSAGRRALVLDVRGD 186 Y+ +++K + R KL Y + L+ + +L + + A + Sbjct: 116 DWLYVPTEIKLSK-----------RPKLEYQIILSFHTYLLASVQGAWPETAWLWLREKG 164 Query: 187 EVEYDFAGSQSGRKLWGRYEEALADARSILAGRTVPLPAYC-GACKLCHWYTVCLGQLES 245 D S +E LA+ ++L R P C C WY C G +S Sbjct: 165 LYSVDLWRSLP------LMQEQLAELVNLLKARKEPEVFISRSQCSHCTWYEHCYGLAQS 218 Query: 246 ADDLTLIAGLRRSDRDGMRE-RIPSIADFAAVDPGEFISGKKTVFRGIGADRLRAL--HA 302 L+L+ G+ S +++ R+ ++ A++ P + G G D L A Sbjct: 219 QQHLSLLPGVTASRYTVLQQHRLTTVEALASIAPQQL-----EALPGFGRDVAEKLVRQA 273 Query: 303 RAALLKRPDPKPYLRTPVSLPICSVELFFDVEVDPGRDVVYLHGVL--ERQGSDERYVSF 360 R+ L P P L P +LP +EL+FD+E +PG D+V+LHG+L +R + + Sbjct: 274 RSTLHNHAIPLPTL-PPDTLPTAPIELYFDIEAEPGLDLVFLHGILVVDRAEQSQTFYPL 332 Query: 361 FADEPTPAAERDAFAAALAYFADRRDARTHYYSKYERSTYRRLQRKYPQVCSPEEVERLF 420 A+ P AE A+ L A ++ YE T RL + Y R Sbjct: 333 VAE--CPEAEEQAWYQFLELVHSYPTAPIFHFCPYETQTVERLAQLY------RTPNRRI 384 Query: 421 DP--ARAVDLYGDVVMKATEWPTRDRSIKTLARYLGFSWRDPNPSGAASIEWYDRWCTHR 478 P +R +DL+ V T P ++K +AR++GF WRD +GA +I WY +W Sbjct: 385 KPLLSRCIDLHQWVTQTVTL-PIESYTLKLIARWIGFQWRDAQANGAQAIYWYTQWLQTG 443 Query: 479 TPELKQRILNYNQDDCCATRVLLDAIRDL 507 + I++YN+DDC AT + D + + Sbjct: 444 DRQFLNAIIDYNEDDCRATHRVKDWLVEF 472 >ref|YP_001865015.1| hypothetical protein Npun_R1363 [Nostoc punctiforme PCC 73102] gb|ACC80072.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 486 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 137/515 (26%), Positives = 220/515 (42%), Gaps = 69/515 (13%) Query: 23 MKVTASMLYDLVECPRRVLLDLFGDPSRRDESAAFVRLMWERGARFERETIAKLRVPFLD 82 M + A +L C RR LD+ GD S+RD +R + + + +A++ D Sbjct: 1 MLINAELLLQYQRCKRRTFLDIHGDKSQRDAPNELLRKLQQDKIAHQLSALAQMTYHQPD 60 Query: 83 LSNAAEADKEGLTMQAMAEGAPLIYGGRIGAD-----DLVGMPDLLRRVPGG-------Y 130 S E T++ M G IY G + A+ L+ P+LL + PG Y Sbjct: 61 YSYGNWEKAEKATLELMERGVEYIYKGVLLANYSDEYTLLSRPNLLVKQPGQSRFGDWMY 120 Query: 131 MASDVKSGRGKEGGDDGREGRLKLSYAVQLASYVDILERLGHSAGRRAL-VLDVRGDEVE 189 + + ++ G+ R K Y V A + +L + AL +L + Sbjct: 121 VPASIELGK-----------RPKQEYQVVAAFHTQVLSTVQGVVPETALLILRTKNSNYA 169 Query: 190 YDFAGSQSGRKLWGRYEEALADARSILAGRTVPLPAYC----GACKLCHWYTVCLGQLES 245 D K R ++ L + +L +P P C CHWY+ C +S Sbjct: 170 VDLF------KWIPRMQQILEEFIEVLE---LPNPPEVFISRQKCNFCHWYSQCYAVAQS 220 Query: 246 ADDLTLIAGLRRSDRDGMRE-RIPSIADFAAVDPGEFISGKKTVFRGIGADRLRA----L 300 L+L+ G+ +++ I ++ A P T+ +G D A + Sbjct: 221 EKHLSLLPGVTPLRYTQLQDVAITTLESLANTSPS-------TLENLVGFDPKVAPKLVV 273 Query: 301 HARAALLKRPDPKPYLRTPVSLPI------CSVELFFDVEVDPGRDVVYLHGVL--ERQG 352 A++AL KRP L P LPI +EL+FD+E P D+ YL GVL +R Sbjct: 274 QAQSALEKRP-----LVLPYPLPIEDITFTAPIELYFDIEAQPDLDLNYLLGVLVVDRLA 328 Query: 353 SDERYVSFFADEPTPAAERDAFAAALAYFADRRDARTHYYSKYERSTYRRLQRKYPQVCS 412 + E++ SF AD+P E + L +A +++ YE T +RL + Y + Sbjct: 329 NTEQFYSFLADKP--EDEELVWQQFLDLVWQYPEAPIYHFCVYEFDTVKRLAKLYNTPYA 386 Query: 413 PEEVERLFDPARAVDLYGDVVMKATEWPTRDRSIKTLARYLGFSWRDPNPSGAASIEWYD 472 V + + R VD+Y + ++ P ++K +AR+LGF WR+ SGA I WYD Sbjct: 387 --SVRPVLN--RFVDVYEQLT-QSVALPVESYALKAIARWLGFEWREKEASGAKCIYWYD 441 Query: 473 RWCTHRTPELKQRILNYNQDDCCATRVLLDAIRDL 507 +W L + I +YN+DDC AT + D + + Sbjct: 442 QWLETGDRTLLEIIQSYNEDDCRATHRVKDWLVNF 476 >ref|YP_172752.1| hypothetical protein syc2042_d [Synechococcus elongatus PCC 6301] ref|YP_401068.1| hypothetical protein Synpcc7942_2051 [Synechococcus elongatus PCC 7942] dbj|BAD80232.1| hypothetical protein [Synechococcus elongatus PCC 6301] gb|ABB58081.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 480 Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 137/492 (27%), Positives = 216/492 (43%), Gaps = 59/492 (11%) Query: 30 LYDLVECPRRVLLDLFGDPSRRDESAAFVRLMWERGARFERETIAKLRVPFLDLSNAAEA 89 L D + C RR+ L+ +GD + + A+++ + R+ A+ + +D S Sbjct: 8 LLDYLRCARRLYLNRWGDRQQAEAPNAYLQRLRRLALERRRDVAAEWQAIAVDPS----- 62 Query: 90 DKEGLTMQAMAEGAPLIYGGRIGADDLVGMPDLLRRVPGGYMASD-------VKSGRGKE 142 D+ T+ MA+G I GGR+ + PDLL R PG + D VK + Sbjct: 63 DRAASTLDLMAQGVDCIEGGRLQVEPHWADPDLLVRQPGQSIWGDWIYQPVAVKLAK--- 119 Query: 143 GGDDGREGRLKLSYAVQLASYVDILERLGHSAGRRALVL--DVRGDEVEYDFAGSQSGRK 200 + K Y +QLA ++L + + +L D D SQ Sbjct: 120 --------KPKTEYLLQLAFQAELLTSIQGVWPEQGWLLLRDCHPKAYNLDLRRSQ---- 167 Query: 201 LWGRYEEALADARSILAGRTVP-LPAYCGACKLCHWYTVCLGQLESADDLTLIAGLRRSD 259 +E LA IL + P L C LC W T C + L+L+ G+ S Sbjct: 168 ----LQEHLAACAPILQNQQEPELFISRSRCDLCVWQTDCRDRARDQVHLSLLPGVSPSR 223 Query: 260 RDGMRE-RIPSIADFAAVDPGEFISGKKTVFRGIGADRLRALHAR----AALLKRPDPKP 314 +R+ ++ + A DP I AD L R AA+ P+P Sbjct: 224 FAILRDLKLDQLEALATADPQSL---------AIAADWELGLAQRLVQQAAVFLSQQPQP 274 Query: 315 YLRTPVSLPICSVELFFDVEVDPGRDVVYLHGVL--ERQGSDERYVSFFADEPTPAAERD 372 L+T + P VE FFD+E P D+ YLHGVL +R+ + ++ A++P E D Sbjct: 275 -LQT-YAFPDSDVEFFFDIEAQPDLDLCYLHGVLIRDRRQPESQFRPLLAEQPD--QEAD 330 Query: 373 AFAAALAYFADRRDARTHYYSKYERSTYRRLQRKYPQVCSPEEVERLFDPARAVDLYGDV 432 + L A +++ +E + RRL ++Y CS +E L R +D++ V Sbjct: 331 TWQQLLQLLDRHPQAPVYHFCSFEVDSLRRLGQRYG--CSTRRLEALL--TRFIDIHA-V 385 Query: 433 VMKATEWPTRDRSIKTLARYLGFSWRDPNPSGAASIEWYDRWCTHRTPELKQRILNYNQD 492 + ++ PT ++K++AR+LGF WRD +G+ +I WYD W RIL YN+D Sbjct: 386 LTRSVLLPTESYALKSIARWLGFDWRDTEANGSQAILWYDYWLETGDRTWLDRILLYNED 445 Query: 493 DCCATRVLLDAI 504 DC AT ++ D + Sbjct: 446 DCRATAIVKDWL 457