BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0144.0017.p (238 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768929.1| hypothetical protein blr2289 [Bradyrhizobium ja... 91 1e-16 ref|YP_001606156.1| ferrichrome receptor FcuA [Yersinia pestis A... 37 3.0 ref|NP_669860.1| ferrichrome receptor, TonB dependent [Yersinia ... 37 3.0 ref|YP_651037.1| ferrichrome receptor protein [Yersinia pestis A... 37 3.1 ref|ZP_01888331.1| ferrichrome receptor protein [Yersinia pestis... 37 3.1 >ref|NP_768929.1| hypothetical protein blr2289 [Bradyrhizobium japonicum USDA 110] dbj|BAC47554.1| blr2289 [Bradyrhizobium japonicum USDA 110] Length = 252 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 12/227 (5%) Query: 2 RGIRAISIDPAARSITAIEISPETRFVSGFFGA--KPKVAAKLPKGDALLTTV-REYGEA 58 R ++ + ID R ++ IEI P +R + G+ +PK A LP GD LL Sbjct: 22 RIVKVVHIDATLRIVSQIEIEPHSRELIRLCGSSGRPKTAITLPSGDVLLCAEGSSTAPG 81 Query: 59 FTVGGSRPVVGPGLIVGRRNGPGDRASVRIALADVVTMVRWTSVEMPPRPVLPPPPASVG 118 FT+GGS +++G+R+ + R + ++RW VE P V P V Sbjct: 82 FTIGGSPTFRSNAVLLGKRDRWRQYTAPRFGTERIEALLRW--VEANPSEV--EPREGVQ 137 Query: 119 AIVIDPKLGIVEEAVIAAHMPAAERLLGGVHDWNMRILSGDYLLSAKTDRNYRWWVRLYG 178 AI+IDP +E I + A E ++G GD + +A + + +W Sbjct: 138 AILIDPAQRTIEAVKIEQSLKAVEDIIGEKIVLAFLAPGGDRVYAAASAQGPKW---RKD 194 Query: 179 EVKLIGRCVIVGVDEETGYFADAAVRLEQLRKQVDFRGPDDKLWVRY 225 + IGRCVIVG E G D A LE L+K V F K WVR+ Sbjct: 195 DAHFIGRCVIVGSSE--GGLVDVAASLETLKKDVRFAAERSKRWVRH 239 >ref|YP_001606156.1| ferrichrome receptor FcuA [Yersinia pestis Angola] ref|ZP_02223830.1| ferrichrome receptor FcuA [Yersinia pestis biovar Orientalis str. F1991016] ref|ZP_02231838.1| ferrichrome receptor FcuA [Yersinia pestis biovar Antiqua str. E1979001] ref|ZP_02237105.1| ferrichrome receptor FcuA [Yersinia pestis biovar Antiqua str. B42003004] ref|ZP_02311997.1| ferrichrome receptor FcuA [Yersinia pestis biovar Orientalis str. MG05-1020] ref|ZP_02317527.1| ferrichrome receptor FcuA [Yersinia pestis biovar Mediaevalis str. K1973002] ref|ZP_02334390.1| ferrichrome receptor, TonB dependent [Yersinia pestis FV-1] ref|ZP_06203774.1| TonB-dependent siderophore receptor [Yersinia pestis KIM D27] ref|YP_003568137.1| ferrichrome receptor FcuA [Yersinia pestis Z176003] gb|ABX85739.1| ferrichrome receptor FcuA [Yersinia pestis Angola] gb|EDR37356.1| ferrichrome receptor FcuA [Yersinia pestis biovar Orientalis str. F1991016] gb|EDR42585.1| ferrichrome receptor FcuA [Yersinia pestis biovar Antiqua str. E1979001] gb|EDR52730.1| ferrichrome receptor FcuA [Yersinia pestis biovar Antiqua str. B42003004] gb|EDR57960.1| ferrichrome receptor FcuA [Yersinia pestis biovar Orientalis str. MG05-1020] gb|EDR64970.1| ferrichrome receptor FcuA [Yersinia pestis biovar Mediaevalis str. K1973002] gb|ACY58459.1| ferrichrome receptor FcuA [Yersinia pestis D106004] gb|ACY62682.1| ferrichrome receptor FcuA [Yersinia pestis D182038] gb|EFA45981.1| TonB-dependent siderophore receptor [Yersinia pestis KIM D27] gb|ADE64875.1| ferrichrome receptor FcuA [Yersinia pestis Z176003] gb|AEL74040.1| ferrichrome receptor, TonB dependent [Yersinia pestis A1122] Length = 720 Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 33/69 (47%), Gaps = 13/69 (18%) Query: 21 ISPETRFVSGFFGAKPKVAAKLPKGDALLTTVR-EYGEAFTVGGSRPVVGPGLIVGRRNG 79 ISP V G +PK A GD LT V +YG A VGG GL VGRR G Sbjct: 158 ISPSGSGVGGMINLEPKRA-----GDTPLTRVTVDYGSAAQVGG-------GLDVGRRYG 205 Query: 80 PGDRASVRI 88 D+ VR+ Sbjct: 206 DNDQYGVRV 214 >ref|NP_669860.1| ferrichrome receptor, TonB dependent [Yersinia pestis KIM 10] ref|ZP_02307632.1| ferrichrome receptor FcuA [Yersinia pestis biovar Antiqua str. UG05-0454] gb|AAM86111.1|AE013858_1 putative ferrichrome receptor, TonB dependent [Yersinia pestis KIM 10] gb|EDR59840.1| ferrichrome receptor FcuA [Yersinia pestis biovar Antiqua str. UG05-0454] Length = 776 Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 33/69 (47%), Gaps = 13/69 (18%) Query: 21 ISPETRFVSGFFGAKPKVAAKLPKGDALLTTVR-EYGEAFTVGGSRPVVGPGLIVGRRNG 79 ISP V G +PK A GD LT V +YG A VGG GL VGRR G Sbjct: 214 ISPSGSGVGGMINLEPKRA-----GDTPLTRVTVDYGSAAQVGG-------GLDVGRRYG 261 Query: 80 PGDRASVRI 88 D+ VR+ Sbjct: 262 DNDQYGVRV 270 >ref|YP_651037.1| ferrichrome receptor protein [Yersinia pestis Antiqua] ref|YP_648298.1| ferrichrome receptor protein [Yersinia pestis Nepal516] ref|YP_001162733.1| ferrichrome receptor protein [Yersinia pestis Pestoides F] gb|ABG18698.1| ferrichrome receptor protein [Yersinia pestis Nepal516] gb|ABG13092.1| ferrichrome receptor protein [Yersinia pestis Antiqua] gb|ABP39760.1| ferrichrome receptor protein [Yersinia pestis Pestoides F] Length = 763 Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 33/69 (47%), Gaps = 13/69 (18%) Query: 21 ISPETRFVSGFFGAKPKVAAKLPKGDALLTTVR-EYGEAFTVGGSRPVVGPGLIVGRRNG 79 ISP V G +PK A GD LT V +YG A VGG GL VGRR G Sbjct: 201 ISPSGSGVGGMINLEPKRA-----GDTPLTRVTVDYGSAAQVGG-------GLDVGRRYG 248 Query: 80 PGDRASVRI 88 D+ VR+ Sbjct: 249 DNDQYGVRV 257 >ref|ZP_01888331.1| ferrichrome receptor protein [Yersinia pestis CA88-4125] ref|YP_002346752.1| ferrichrome receptor protein [Yersinia pestis CO92] ref|ZP_04512282.1| ferrichrome receptor protein [Yersinia pestis biovar Orientalis str. PEXU2] ref|ZP_04513005.1| ferrichrome receptor protein [Yersinia pestis biovar Orientalis str. India 195] ref|ZP_04518031.1| ferrichrome receptor protein [Yersinia pestis Nepal516] emb|CAL20395.1| ferrichrome receptor protein [Yersinia pestis CO92] gb|EDM42783.1| ferrichrome receptor protein [Yersinia pestis CA88-4125] gb|EEO76460.1| ferrichrome receptor protein [Yersinia pestis Nepal516] gb|EEO80960.1| ferrichrome receptor protein [Yersinia pestis biovar Orientalis str. India 195] gb|EEO83512.1| ferrichrome receptor protein [Yersinia pestis biovar Orientalis str. PEXU2] gb|ADV99086.1| ferrichrome receptor protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 758 Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 33/69 (47%), Gaps = 13/69 (18%) Query: 21 ISPETRFVSGFFGAKPKVAAKLPKGDALLTTVR-EYGEAFTVGGSRPVVGPGLIVGRRNG 79 ISP V G +PK A GD LT V +YG A VGG GL VGRR G Sbjct: 196 ISPSGSGVGGMINLEPKRA-----GDTPLTRVTVDYGSAAQVGG-------GLDVGRRYG 243 Query: 80 PGDRASVRI 88 D+ VR+ Sbjct: 244 DNDQYGVRV 252