BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0143.0059.p         (72 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001204525.1| hypothetical protein BRADO2466 [Bradyrhizobi...    35   3.4  

>ref|YP_001204525.1| hypothetical protein BRADO2466 [Bradyrhizobium sp. ORS 278]
 emb|CAL76288.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 81

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 31/48 (64%)

Query: 12 VIAVLIEQRSIVRAAGASFAAHLLDLAIMQLRLNVNDITAEELSGLSD 59
          V+A L + R+ + AAG   +AHL+ +AI+ LR+ +N +  ++L  L D
Sbjct: 4  VLASLEQCRATLVAAGNRESAHLISVAILDLRMKLNRLGEDDLKSLCD 51