BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0143.0049.p (476 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767470.1| chromosomal replication initiation protein [Bra... 876 0.0 ref|YP_529899.1| chromosomal replication initiation protein [Rho... 874 0.0 ref|ZP_01044953.1| chromosomal replication initiator protein, Dn... 870 0.0 ref|YP_778942.1| chromosomal replication initiation protein [Rho... 865 0.0 ref|YP_316621.1| chromosomal replication initiation protein [Nit... 864 0.0 >ref|NP_767470.1| chromosomal replication initiation protein [Bradyrhizobium japonicum USDA 110] sp|Q89W63.1|DNAA_BRAJA RecName: Full=Chromosomal replication initiator protein DnaA dbj|BAC46095.1| chromosomal replication initiator protein [Bradyrhizobium japonicum USDA 110] Length = 470 Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/476 (93%), Positives = 454/476 (95%), Gaps = 6/476 (1%) Query: 1 MTNTEQDRWSRVKGRLRTSVGEDVYTSWFARMDLESVHDESVHLSVPTRFLKSWIQAHYA 60 M +EQDRWSRVKGRLR+SVGED+YTSWFARMDLE V DESV LSVPTRFLKSWIQAHYA Sbjct: 1 MNTSEQDRWSRVKGRLRSSVGEDIYTSWFARMDLEDVQDESVRLSVPTRFLKSWIQAHYA 60 Query: 61 DRVLSCWQAEMPEVHKIDLTVRSAIRATAPVKETAAPVEVRRIERTDGRPAPELRSFATA 120 +RVLSCWQAEMPEVH+IDLTVRSA+R AP KE APVE RR PAPELRS ATA Sbjct: 61 ERVLSCWQAEMPEVHRIDLTVRSAVRPVAPPKEAPAPVETRRA------PAPELRSTATA 114 Query: 121 PVSASHDALGGSPLDPRLTFASFVVGRSNTLAHAAARQVAEGRRGDPVMFNPLYIHAGVG 180 PVSA+HDALGGSPLDPRLTFASFV+GRSNTLAHAAARQVAEGRRGDPVMFNPLYIHAGVG Sbjct: 115 PVSANHDALGGSPLDPRLTFASFVIGRSNTLAHAAARQVAEGRRGDPVMFNPLYIHAGVG 174 Query: 181 LGKTHLLQAVTWAGNSGGERKVLYLTAEKFMYGFVAALKTQTALAFKEALRGIDVLVIDD 240 LGKTHLLQAVTWAGNSG ERKVLYLTAEKFMYGFVAALKTQTALAFKEALRGIDVLVIDD Sbjct: 175 LGKTHLLQAVTWAGNSGNERKVLYLTAEKFMYGFVAALKTQTALAFKEALRGIDVLVIDD 234 Query: 241 LQFLQGKSTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDDRVRSRLAGGLVVEMGSL 300 LQFLQGKSTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDDRVRSRLAGGLVVEMGSL Sbjct: 235 LQFLQGKSTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDDRVRSRLAGGLVVEMGSL 294 Query: 301 GEELRLGILKSRVAAARAHHASFDVPEEVLDYLARTITHNGRDLEGAINRLLAHSKLNNQ 360 GEELR GILKSRVAAARAHHA+FDVPEEVL YLARTITHNGRDLEGAINRLLAHSKLNNQ Sbjct: 295 GEELRHGILKSRVAAARAHHATFDVPEEVLHYLARTITHNGRDLEGAINRLLAHSKLNNQ 354 Query: 361 PVTLEMAEREVRDLIRPQEPKRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAM 420 PVTLEMAEREVRDL+RPQEPKRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAM Sbjct: 355 PVTLEMAEREVRDLVRPQEPKRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAM 414 Query: 421 YLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEALVAKDTALSEEVESLKRQLQE 476 YLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEALV+KDTALSEEVESLKRQLQE Sbjct: 415 YLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEALVSKDTALSEEVESLKRQLQE 470 >ref|YP_529899.1| chromosomal replication initiation protein [Rhodopseudomonas palustris BisB18] sp|Q21DF6.1|DNAA_RHOPB RecName: Full=Chromosomal replication initiator protein DnaA gb|ABD85580.1| chromosomal replication initiator protein DnaA [Rhodopseudomonas palustris BisB18] Length = 473 Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/476 (89%), Positives = 449/476 (94%), Gaps = 3/476 (0%) Query: 1 MTNTEQDRWSRVKGRLRTSVGEDVYTSWFARMDLESVHDESVHLSVPTRFLKSWIQAHYA 60 MTN EQDRWSRVKGRLR+SVGEDVY+SWFARMDLESV ESVHLSVPTRFLKSWIQ HY+ Sbjct: 1 MTNIEQDRWSRVKGRLRSSVGEDVYSSWFARMDLESVQPESVHLSVPTRFLKSWIQTHYS 60 Query: 61 DRVLSCWQAEMPEVHKIDLTVRSAIRATAPVKETAAPVEVRRIERTDGRPAPELRSFATA 120 DRVLSCWQAEMP+VH++DLTVR+A+R AP K+ A E RR DGRPAPELR+ A A Sbjct: 61 DRVLSCWQAEMPQVHRVDLTVRTAMRCAAPAKDAPAHAEPRR---DDGRPAPELRATAIA 117 Query: 121 PVSASHDALGGSPLDPRLTFASFVVGRSNTLAHAAARQVAEGRRGDPVMFNPLYIHAGVG 180 PVSA+H+ALGGSPLDPRLTF SFV+GRSNTLAHAAARQVAEGRRGDPVMFNPLYIH+GVG Sbjct: 118 PVSATHEALGGSPLDPRLTFGSFVIGRSNTLAHAAARQVAEGRRGDPVMFNPLYIHSGVG 177 Query: 181 LGKTHLLQAVTWAGNSGGERKVLYLTAEKFMYGFVAALKTQTALAFKEALRGIDVLVIDD 240 LGKTHLLQAVTWAGNSG ERKVLYLTAEKFMYGFVAALK+QTALAFKEALRGIDVLVIDD Sbjct: 178 LGKTHLLQAVTWAGNSGTERKVLYLTAEKFMYGFVAALKSQTALAFKEALRGIDVLVIDD 237 Query: 241 LQFLQGKSTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDDRVRSRLAGGLVVEMGSL 300 LQFLQGK+TQAEFCHTLNALIDAGRQVVIAADRPPSDLESLD+RVRSRLAGGLVVEM SL Sbjct: 238 LQFLQGKTTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDERVRSRLAGGLVVEMASL 297 Query: 301 GEELRLGILKSRVAAARAHHASFDVPEEVLDYLARTITHNGRDLEGAINRLLAHSKLNNQ 360 GE+LRLGILKSRV AARAHHASFDVP VL+YLARTITHNGRDLEGAINRLLAHSKLN Q Sbjct: 298 GEDLRLGILKSRVTAARAHHASFDVPLPVLEYLARTITHNGRDLEGAINRLLAHSKLNAQ 357 Query: 361 PVTLEMAEREVRDLIRPQEPKRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAM 420 PVTLEMAERE+RDL+RPQEPKRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAM Sbjct: 358 PVTLEMAEREIRDLVRPQEPKRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAM 417 Query: 421 YLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEALVAKDTALSEEVESLKRQLQE 476 YLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIE LVAKDTALS+EVE LKRQLQE Sbjct: 418 YLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEGLVAKDTALSDEVELLKRQLQE 473 >ref|ZP_01044953.1| chromosomal replication initiator protein, DnaA [Nitrobacter sp. Nb-311A] gb|EAQ36958.1| chromosomal replication initiator protein, DnaA [Nitrobacter sp. Nb-311A] Length = 509 Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/476 (88%), Positives = 452/476 (94%), Gaps = 1/476 (0%) Query: 1 MTNTEQDRWSRVKGRLRTSVGEDVYTSWFARMDLESVHDESVHLSVPTRFLKSWIQAHYA 60 M++ EQ+RWSRVKGRLR++VGED+Y+SWFARMDLESVH ESV LSVPTRFLKSWIQAHYA Sbjct: 35 MSDIEQERWSRVKGRLRSTVGEDIYSSWFARMDLESVHGESVRLSVPTRFLKSWIQAHYA 94 Query: 61 DRVLSCWQAEMPEVHKIDLTVRSAIRATAPVKETAAPVEVRRIERTDGRPAPELRSFATA 120 +RVL+CWQAE+P+VH+IDLTVRSA+R APV+E AP +VRR+ER +GR EL++ ATA Sbjct: 95 ERVLACWQAELPDVHRIDLTVRSAMRCAAPVREAPAP-DVRRLERGEGRDGTELKTVATA 153 Query: 121 PVSASHDALGGSPLDPRLTFASFVVGRSNTLAHAAARQVAEGRRGDPVMFNPLYIHAGVG 180 P SA+HDALGGSPLDPRLTF SFV GRSN LAHAAARQVAEGRRGD VMFNPLYIHAGVG Sbjct: 154 PASANHDALGGSPLDPRLTFQSFVTGRSNALAHAAARQVAEGRRGDSVMFNPLYIHAGVG 213 Query: 181 LGKTHLLQAVTWAGNSGGERKVLYLTAEKFMYGFVAALKTQTALAFKEALRGIDVLVIDD 240 LGKTHLLQAVTWAGN+G ER+VLYLTAEKFMYGFVAALKTQTALAFKEALRGIDVLVIDD Sbjct: 214 LGKTHLLQAVTWAGNAGTERRVLYLTAEKFMYGFVAALKTQTALAFKEALRGIDVLVIDD 273 Query: 241 LQFLQGKSTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDDRVRSRLAGGLVVEMGSL 300 LQFLQGKSTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDDRVRSRLAGGLVVEMGSL Sbjct: 274 LQFLQGKSTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDDRVRSRLAGGLVVEMGSL 333 Query: 301 GEELRLGILKSRVAAARAHHASFDVPEEVLDYLARTITHNGRDLEGAINRLLAHSKLNNQ 360 GEELRLGIL+SRV AARAHHASFDVPE+VLDYLA+TITHNGRDLEGAINRLLAHSKLN Q Sbjct: 334 GEELRLGILRSRVEAARAHHASFDVPEQVLDYLAKTITHNGRDLEGAINRLLAHSKLNAQ 393 Query: 361 PVTLEMAEREVRDLIRPQEPKRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAM 420 PVTLEMAEREVRDL+RPQEP+RIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAM Sbjct: 394 PVTLEMAEREVRDLVRPQEPRRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAM 453 Query: 421 YLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEALVAKDTALSEEVESLKRQLQE 476 YLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEALV+KD LS+EVE LKRQLQE Sbjct: 454 YLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEALVSKDVTLSDEVELLKRQLQE 509 >ref|YP_778942.1| chromosomal replication initiation protein [Rhodopseudomonas palustris BisA53] sp|Q07VS2.1|DNAA_RHOP5 RecName: Full=Chromosomal replication initiator protein DnaA gb|ABJ03962.1| chromosomal replication initiator protein DnaA [Rhodopseudomonas palustris BisA53] Length = 474 Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/477 (89%), Positives = 449/477 (94%), Gaps = 4/477 (0%) Query: 1 MTNTEQDRWSRVKGRLRTSVGEDVYTSWFARMDLESVHDESVHLSVPTRFLKSWIQAHYA 60 MTN EQ+RWSRVKGRLRT+VGEDVY+SWFARMDLESV ESVHLSVPTRFLKSWIQ HY+ Sbjct: 1 MTNIEQERWSRVKGRLRTTVGEDVYSSWFARMDLESVQQESVHLSVPTRFLKSWIQTHYS 60 Query: 61 DRVLSCWQAEMPEVHKIDLTVRSAIRATAPVKETAAPVEVRRIERTDGRPAP-ELRSFAT 119 +RVLSCWQAEMPEVH+IDLTVR+A+R AP KE AAP+E RR D R A +LR AT Sbjct: 61 ERVLSCWQAEMPEVHRIDLTVRTAMRCAAPAKEQAAPIEPRR---EDNRAAAHDLRVSAT 117 Query: 120 APVSASHDALGGSPLDPRLTFASFVVGRSNTLAHAAARQVAEGRRGDPVMFNPLYIHAGV 179 APVSA+H+ALGGSPLDPRLTF+SFVVGRSNTLAHAAA+QVAEGRRGDPVMFNPLYIH+GV Sbjct: 118 APVSANHEALGGSPLDPRLTFSSFVVGRSNTLAHAAAKQVAEGRRGDPVMFNPLYIHSGV 177 Query: 180 GLGKTHLLQAVTWAGNSGGERKVLYLTAEKFMYGFVAALKTQTALAFKEALRGIDVLVID 239 GLGKTHLLQAVTWAGNSG ERKVLYLTAEKFMYGFVAALK+QTALAFKEALRGIDVLVID Sbjct: 178 GLGKTHLLQAVTWAGNSGLERKVLYLTAEKFMYGFVAALKSQTALAFKEALRGIDVLVID 237 Query: 240 DLQFLQGKSTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDDRVRSRLAGGLVVEMGS 299 DLQFLQGK+TQAEFCHTLNALIDAGRQVVIAADRPPSDLESLD+RVRSRLAGGLVVEM S Sbjct: 238 DLQFLQGKTTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDERVRSRLAGGLVVEMAS 297 Query: 300 LGEELRLGILKSRVAAARAHHASFDVPEEVLDYLARTITHNGRDLEGAINRLLAHSKLNN 359 LGEELRLGILKSRV AARAHHASF+VP VL+YLA +ITHNGRDLEGAINRLLAHSKLN Sbjct: 298 LGEELRLGILKSRVTAARAHHASFEVPLPVLEYLAHSITHNGRDLEGAINRLLAHSKLNA 357 Query: 360 QPVTLEMAEREVRDLIRPQEPKRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVA 419 QPVTLEMAEREVRDLIRPQEPKRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVA Sbjct: 358 QPVTLEMAEREVRDLIRPQEPKRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVA 417 Query: 420 MYLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEALVAKDTALSEEVESLKRQLQE 476 MYLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIE LV+KD ALS+EVESLKRQLQE Sbjct: 418 MYLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEGLVSKDAALSDEVESLKRQLQE 474 >ref|YP_316621.1| chromosomal replication initiation protein [Nitrobacter winogradskyi Nb-255] sp|Q3SMV0.1|DNAA_NITWN RecName: Full=Chromosomal replication initiator protein DnaA gb|ABA03269.1| chromosomal replication initiator protein, DnaA [Nitrobacter winogradskyi Nb-255] Length = 475 Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/476 (88%), Positives = 449/476 (94%), Gaps = 1/476 (0%) Query: 1 MTNTEQDRWSRVKGRLRTSVGEDVYTSWFARMDLESVHDESVHLSVPTRFLKSWIQAHYA 60 M++TEQ+RWSRVKGRLR++VGED+Y+SWFARMDLESVH ESV LSVPTRFLKSWIQAHYA Sbjct: 1 MSDTEQERWSRVKGRLRSTVGEDIYSSWFARMDLESVHGESVRLSVPTRFLKSWIQAHYA 60 Query: 61 DRVLSCWQAEMPEVHKIDLTVRSAIRATAPVKETAAPVEVRRIERTDGRPAPELRSFATA 120 +RVLSCWQAE+P+VH+IDLTVRSA+R APV+E A + R ER++GR EL++ ATA Sbjct: 61 ERVLSCWQAELPDVHRIDLTVRSAMRCAAPVREAPA-TDARHPERSEGRNGVELKTVATA 119 Query: 121 PVSASHDALGGSPLDPRLTFASFVVGRSNTLAHAAARQVAEGRRGDPVMFNPLYIHAGVG 180 P SA+HDALGGSPLDPRLTF SFV GRSNTLAHAAARQVAEGRRGD VMFNPLYIHAGVG Sbjct: 120 PASANHDALGGSPLDPRLTFQSFVTGRSNTLAHAAARQVAEGRRGDSVMFNPLYIHAGVG 179 Query: 181 LGKTHLLQAVTWAGNSGGERKVLYLTAEKFMYGFVAALKTQTALAFKEALRGIDVLVIDD 240 LGKTHLLQAVTWAGN+G ER+VLYLTAEKFMYGFVAALKTQTALAFKEALRGIDVLVIDD Sbjct: 180 LGKTHLLQAVTWAGNAGTERRVLYLTAEKFMYGFVAALKTQTALAFKEALRGIDVLVIDD 239 Query: 241 LQFLQGKSTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDDRVRSRLAGGLVVEMGSL 300 LQFLQGKSTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDDRVRSRLAGGLVVEMGSL Sbjct: 240 LQFLQGKSTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDDRVRSRLAGGLVVEMGSL 299 Query: 301 GEELRLGILKSRVAAARAHHASFDVPEEVLDYLARTITHNGRDLEGAINRLLAHSKLNNQ 360 GEELRLGIL+SRV AAR HHASFDVPE VLDYLA+ ITHNGRDLEGAINRLLAHSKLN Q Sbjct: 300 GEELRLGILRSRVEAARVHHASFDVPEPVLDYLAKAITHNGRDLEGAINRLLAHSKLNAQ 359 Query: 361 PVTLEMAEREVRDLIRPQEPKRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAM 420 PVTLEMAEREVRDL+RPQEP+RIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAM Sbjct: 360 PVTLEMAEREVRDLVRPQEPRRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAM 419 Query: 421 YLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEALVAKDTALSEEVESLKRQLQE 476 YLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEALV+KDT LS+EVE LKRQLQE Sbjct: 420 YLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEALVSKDTTLSDEVELLKRQLQE 475