BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0143.0046.p         (170 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767474.1| methionine sulfoxide reductase A [Bradyrhizobiu...   340   6e-92
ref|YP_001243603.1| methionine sulfoxide reductase A [Bradyrhizo...   317   5e-85
ref|YP_001208938.1| methionine sulfoxide reductase A [Bradyrhizo...   311   2e-83
ref|YP_534782.1| methionine sulfoxide reductase A [Rhodopseudomo...   310   3e-83
ref|ZP_08628104.1| peptide methionine sulfoxide reductase MsrA [...   297   4e-79

>ref|NP_767474.1| methionine sulfoxide reductase A [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC46099.1| peptide methionine sulfoxide reductase [Bradyrhizobium japonicum
           USDA 110]
          Length = 218

 Score =  340 bits (871), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 157/170 (92%), Positives = 168/170 (98%)

Query: 1   VFGLGCFWGAERKFWELGEGIYTTAVGYAGGHTPNPTYEEVCSGRTGHTEVVLVVFDPKK 60
           VFGLGCFWGAERKFWELG+G+YTTAVGYAGGHTPNPTYEE CSGRTGHTEVVLVVFDPKK
Sbjct: 49  VFGLGCFWGAERKFWELGDGVYTTAVGYAGGHTPNPTYEETCSGRTGHTEVVLVVFDPKK 108

Query: 61  ISYEKLLKTFWENHNPTQGMRQGNDIGTQYRSAIYTFSDAQRKAADESQAMYQKALAAKG 120
           +SYEKLLKTFWE+HNPTQGMRQGND+GTQYRSAIYT+SDAQ+KAADES+A+YQKALAAKG
Sbjct: 109 VSYEKLLKTFWESHNPTQGMRQGNDVGTQYRSAIYTYSDAQKKAADESKALYQKALAAKG 168

Query: 121 LGAITTEVAPAGEFYFAEDYHQQYLAKNPAGYCGLGGTGVSCPIGVGVTA 170
           LGAITTE+APAG FYFAEDYHQQYLAKNPAGYCGLGGTGVSCPIGVGV+A
Sbjct: 169 LGAITTEIAPAGAFYFAEDYHQQYLAKNPAGYCGLGGTGVSCPIGVGVSA 218


>ref|YP_001243603.1| methionine sulfoxide reductase A [Bradyrhizobium sp. BTAi1]
 gb|ABQ39697.1| Peptide methionine sulfoxide reductase msrA [Bradyrhizobium sp.
           BTAi1]
          Length = 218

 Score =  317 bits (811), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 147/170 (86%), Positives = 160/170 (94%)

Query: 1   VFGLGCFWGAERKFWELGEGIYTTAVGYAGGHTPNPTYEEVCSGRTGHTEVVLVVFDPKK 60
           VFGLGCFWGAERKFW+LG+G++ TAVGYAGGHTPNPTYEEVCSG T HTEVVLVVFDPK 
Sbjct: 49  VFGLGCFWGAERKFWQLGDGVHVTAVGYAGGHTPNPTYEEVCSGLTAHTEVVLVVFDPKV 108

Query: 61  ISYEKLLKTFWENHNPTQGMRQGNDIGTQYRSAIYTFSDAQRKAADESQAMYQKALAAKG 120
           ISYE+LLKTFWE+H+PTQGMRQGND+GTQYRSAIYTFSDAQR+ AD S+A Y+ AL AKG
Sbjct: 109 ISYERLLKTFWESHDPTQGMRQGNDVGTQYRSAIYTFSDAQRETADASKAAYETALRAKG 168

Query: 121 LGAITTEVAPAGEFYFAEDYHQQYLAKNPAGYCGLGGTGVSCPIGVGVTA 170
           LGAITTE+APAG FYFAEDYHQQYLAKNPAGYCGLGGTGV+CPIGVGVTA
Sbjct: 169 LGAITTEIAPAGPFYFAEDYHQQYLAKNPAGYCGLGGTGVACPIGVGVTA 218


>ref|YP_001208938.1| methionine sulfoxide reductase A [Bradyrhizobium sp. ORS 278]
 emb|CAL80723.1| Peptide methionine sulfoxide reductase msrA
           (Protein-methionine-S-oxide reductase) (Peptide Met(O)
           reductase) [Bradyrhizobium sp. ORS 278]
          Length = 218

 Score =  311 bits (797), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 144/170 (84%), Positives = 159/170 (93%)

Query: 1   VFGLGCFWGAERKFWELGEGIYTTAVGYAGGHTPNPTYEEVCSGRTGHTEVVLVVFDPKK 60
           VFGLGCFWGAERKFW+LG GI+ TAVGYAGGHTPNPTYEEVCSG T HTEVVLVVFDPK 
Sbjct: 49  VFGLGCFWGAERKFWQLGNGIHVTAVGYAGGHTPNPTYEEVCSGLTAHTEVVLVVFDPKI 108

Query: 61  ISYEKLLKTFWENHNPTQGMRQGNDIGTQYRSAIYTFSDAQRKAADESQAMYQKALAAKG 120
           ISYE+LLKTFWE+H+PTQGMRQGND+GTQYRSA+YTFS+AQR+ A+ S+  Y+KAL AKG
Sbjct: 109 ISYERLLKTFWESHDPTQGMRQGNDVGTQYRSAVYTFSEAQRETAEASKQAYEKALRAKG 168

Query: 121 LGAITTEVAPAGEFYFAEDYHQQYLAKNPAGYCGLGGTGVSCPIGVGVTA 170
           LGAITTE+APAG FYFAEDYHQQYLAKNPAGYCGLGGTGV+CPIGVGV+A
Sbjct: 169 LGAITTEIAPAGPFYFAEDYHQQYLAKNPAGYCGLGGTGVACPIGVGVSA 218


>ref|YP_534782.1| methionine sulfoxide reductase A [Rhodopseudomonas palustris
           BisB18]
 gb|ABD90463.1| peptide methionine sulfoxide reductase [Rhodopseudomonas palustris
           BisB18]
          Length = 218

 Score =  310 bits (795), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 144/170 (84%), Positives = 155/170 (91%)

Query: 1   VFGLGCFWGAERKFWELGEGIYTTAVGYAGGHTPNPTYEEVCSGRTGHTEVVLVVFDPKK 60
           VFGLGCFWGAERKFW LG+G+Y TAVGYAGGHTPNPTYEEVCSGRTGHTE VLVVFDP +
Sbjct: 49  VFGLGCFWGAERKFWALGDGVYVTAVGYAGGHTPNPTYEEVCSGRTGHTEAVLVVFDPAR 108

Query: 61  ISYEKLLKTFWENHNPTQGMRQGNDIGTQYRSAIYTFSDAQRKAADESQAMYQKALAAKG 120
           +S+E LLK FWE+HNPTQGMRQGND+GTQYRSAIYTF DAQ KAA+ S+A Y +ALAAKG
Sbjct: 109 LSFEALLKVFWESHNPTQGMRQGNDVGTQYRSAIYTFGDAQDKAAESSKAAYGRALAAKG 168

Query: 121 LGAITTEVAPAGEFYFAEDYHQQYLAKNPAGYCGLGGTGVSCPIGVGVTA 170
           LGAITTE+APA  FYFAEDYHQQYLAKNPAGYCGLGGTGVSCPIG GV A
Sbjct: 169 LGAITTEIAPADIFYFAEDYHQQYLAKNPAGYCGLGGTGVSCPIGAGVNA 218


>ref|ZP_08628104.1| peptide methionine sulfoxide reductase MsrA [Bradyrhizobiaceae
           bacterium SG-6C]
 gb|EGP09013.1| peptide methionine sulfoxide reductase MsrA [Bradyrhizobiaceae
           bacterium SG-6C]
          Length = 217

 Score =  297 bits (760), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 141/170 (82%), Positives = 153/170 (90%), Gaps = 1/170 (0%)

Query: 1   VFGLGCFWGAERKFWELGEGIYTTAVGYAGGHTPNPTYEEVCSGRTGHTEVVLVVFDPKK 60
           +FGLGCFWGAERKFWE+ +G+Y TAVGYAGG TPNPTYEE CSGRTGHTE VLVVFDPKK
Sbjct: 49  IFGLGCFWGAERKFWEM-DGVYVTAVGYAGGVTPNPTYEETCSGRTGHTEAVLVVFDPKK 107

Query: 61  ISYEKLLKTFWENHNPTQGMRQGNDIGTQYRSAIYTFSDAQRKAADESQAMYQKALAAKG 120
           +SYE LLKTFWE+H+PTQGMRQGNDIGTQYRSAIYT +DAQ KAA  S+  Y KAL AK 
Sbjct: 108 VSYEALLKTFWESHDPTQGMRQGNDIGTQYRSAIYTTNDAQMKAAMASKDAYNKALNAKR 167

Query: 121 LGAITTEVAPAGEFYFAEDYHQQYLAKNPAGYCGLGGTGVSCPIGVGVTA 170
            G+ITTE+ PAGEFYFAEDYHQQYLAKNPAGYCGLGGTGVSCPIGVGV+A
Sbjct: 168 YGSITTEIKPAGEFYFAEDYHQQYLAKNPAGYCGLGGTGVSCPIGVGVSA 217