BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0143.0034.p (389 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242807.1| branched chain amino acid ABC transporter pe... 694 0.0 ref|YP_001203184.1| branched chain amino acid ABC transporter pe... 686 0.0 ref|NP_768090.1| ABC transporter permease protein [Bradyrhizobiu... 685 0.0 ref|YP_782648.1| inner-membrane translocator [Rhodopseudomonas p... 682 0.0 ref|YP_533554.1| inner-membrane translocator [Rhodopseudomonas p... 677 0.0 >ref|YP_001242807.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ38901.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 387 Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/389 (89%), Positives = 364/389 (93%), Gaps = 2/389 (0%) Query: 1 MTPHILTRSLDRAATAFVLIVAAIGVLIPLSNLLLPQGSMFQVPTYLVALWGKYVCYAIL 60 M PH+LTRSLDRAAT FVLIVAA GVLIPLSNLLLP GS QVPTYLVALWGKYVCYAIL Sbjct: 1 MMPHMLTRSLDRAATIFVLIVAACGVLIPLSNLLLPAGSALQVPTYLVALWGKYVCYAIL 60 Query: 61 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLNWSKL 120 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIG+RGVYGNP+LPDFMVFLN+SKL Sbjct: 61 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYGNPILPDFMVFLNYSKL 120 Query: 121 PWYWYGFDKFWFAALMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN 180 PWYW+GFD FWFAALMVL VPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN Sbjct: 121 PWYWHGFDMFWFAALMVLFVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN 180 Query: 181 DFGFGGNNGLTDFKDIIGFNVQAEGTRAALFLLSCLALIIAFLICRAIVTSKLGKVLIAV 240 DFGFGGNNGLTDFKDI+GFNVQAEGTRAALF LSCLALI+AFLICRA+V+SKLGKVLIA+ Sbjct: 181 DFGFGGNNGLTDFKDILGFNVQAEGTRAALFALSCLALILAFLICRAVVSSKLGKVLIAI 240 Query: 241 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPANSIEAVIWV 300 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAP NSIEAVIWV Sbjct: 241 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWV 300 Query: 301 AVGGRGTLVGAALGAVVVNYAKTFFTSGPLAPYWLFMLGALFILVTLLLPKGIVGTFSSW 360 AVGGRGTLVGAALGAVVVNYAKTFFTSG LAPYWLFMLGALF+LVTLLLPKGI+GTF+SW Sbjct: 301 AVGGRGTLVGAALGAVVVNYAKTFFTSGVLAPYWLFMLGALFVLVTLLLPKGILGTFNSW 360 Query: 361 RETRRSAAIAADRDSAAREDGVGAPNPAE 389 + S + DSAAREDGV P AE Sbjct: 361 WDHVSSK--TPNADSAAREDGVTEPKMAE 387 >ref|YP_001203184.1| branched chain amino acid ABC transporter permease [Bradyrhizobium sp. ORS 278] emb|CAL74947.1| Putative branched-chain amino acid ABC transporter (permease protein) [Bradyrhizobium sp. ORS 278] Length = 387 Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/389 (87%), Positives = 364/389 (93%), Gaps = 2/389 (0%) Query: 1 MTPHILTRSLDRAATAFVLIVAAIGVLIPLSNLLLPQGSMFQVPTYLVALWGKYVCYAIL 60 M PH+LTRSLDR A+ F+LIVAA G+LIPLSNLLLP GS QVPTYLVALWGKYVCYAIL Sbjct: 1 MMPHLLTRSLDRGASIFLLIVAACGILIPLSNLLLPAGSALQVPTYLVALWGKYVCYAIL 60 Query: 61 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLNWSKL 120 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIG+RGVYGNP+LPDFMVFLN+SKL Sbjct: 61 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYGNPILPDFMVFLNYSKL 120 Query: 121 PWYWYGFDKFWFAALMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN 180 PWYW+GFD FWFAALMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN Sbjct: 121 PWYWHGFDMFWFAALMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN 180 Query: 181 DFGFGGNNGLTDFKDIIGFNVQAEGTRAALFLLSCLALIIAFLICRAIVTSKLGKVLIAV 240 DFGFGGNNGLTDFKDI+GFNVQA+GTRAALF LSCLALI+AFLICRA+V+SKLGKVLIA+ Sbjct: 181 DFGFGGNNGLTDFKDILGFNVQADGTRAALFALSCLALILAFLICRAVVSSKLGKVLIAI 240 Query: 241 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPANSIEAVIWV 300 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAP NSIEAVIWV Sbjct: 241 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWV 300 Query: 301 AVGGRGTLVGAALGAVVVNYAKTFFTSGPLAPYWLFMLGALFILVTLLLPKGIVGTFSSW 360 AVGGRGTLVGAALGAVVVNYAKTFFTSG LAPYWLFMLGALF++VTLLLPKGI+GTF++W Sbjct: 301 AVGGRGTLVGAALGAVVVNYAKTFFTSGVLAPYWLFMLGALFVMVTLLLPKGILGTFNAW 360 Query: 361 RETRRSAAIAADRDSAAREDGVGAPNPAE 389 + + + DSAAREDGV P AE Sbjct: 361 WDQLGTK--TPNADSAAREDGVTEPKMAE 387 >ref|NP_768090.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46715.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/389 (88%), Positives = 365/389 (93%) Query: 1 MTPHILTRSLDRAATAFVLIVAAIGVLIPLSNLLLPQGSMFQVPTYLVALWGKYVCYAIL 60 MTPH+LTRSLDR+AT F+L+VAA+GVLIPLSNLLLP GS QVPTYLVALWGKYVCYAIL Sbjct: 1 MTPHMLTRSLDRSATIFLLVVAALGVLIPLSNLLLPAGSFLQVPTYLVALWGKYVCYAIL 60 Query: 61 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLNWSKL 120 AL+IDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIG+RGVYGNP+LPDFMVFLN+SKL Sbjct: 61 ALAIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYGNPILPDFMVFLNYSKL 120 Query: 121 PWYWYGFDKFWFAALMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN 180 PWYWYGFD FWFAALMVL+VPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN Sbjct: 121 PWYWYGFDMFWFAALMVLVVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN 180 Query: 181 DFGFGGNNGLTDFKDIIGFNVQAEGTRAALFLLSCLALIIAFLICRAIVTSKLGKVLIAV 240 DFGFGGNNGLTDFKDI+GFNVQAEGTRAALF LSCLALI+ FL+CRAIV+SKLGKVLIAV Sbjct: 181 DFGFGGNNGLTDFKDILGFNVQAEGTRAALFALSCLALILGFLVCRAIVSSKLGKVLIAV 240 Query: 241 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPANSIEAVIWV 300 RDAESRTRFLGYRVESYKLFVFT+SACMAGVAGALYVPQVGIINPSEFAP NSIEAVIWV Sbjct: 241 RDAESRTRFLGYRVESYKLFVFTVSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWV 300 Query: 301 AVGGRGTLVGAALGAVVVNYAKTFFTSGPLAPYWLFMLGALFILVTLLLPKGIVGTFSSW 360 AVGGRGTLVGAALGAVVVNYAKTFFTSG LAPYWLFMLGALFILVTLLLPKGIVGTF++W Sbjct: 301 AVGGRGTLVGAALGAVVVNYAKTFFTSGMLAPYWLFMLGALFILVTLLLPKGIVGTFNTW 360 Query: 361 RETRRSAAIAADRDSAAREDGVGAPNPAE 389 + + AA SAA EDGV P AE Sbjct: 361 WDASKEKRPAATTASAAAEDGVTEPKMAE 389 >ref|YP_782648.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gb|ABJ07668.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 390 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/390 (87%), Positives = 363/390 (93%), Gaps = 1/390 (0%) Query: 1 MTPHILTRSLDRAATAFVLIVAAIGVLIPLSNLLLPQGSMFQVPTYLVALWGKYVCYAIL 60 M PH+LTR+LDR+AT FVL+VAAIGV +PL NLLLP+GS VPTYL+AL+GKYVCYA+L Sbjct: 1 MMPHLLTRTLDRSATVFVLVVAAIGVALPLFNLLLPEGSTLHVPTYLLALFGKYVCYALL 60 Query: 61 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLNWSKL 120 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLN+ L Sbjct: 61 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLNYKAL 120 Query: 121 PWYWYGFDKFWFAALMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN 180 PWYWYGFD FWFAALMVL+VPGLLAF FGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN Sbjct: 121 PWYWYGFDMFWFAALMVLVVPGLLAFGFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN 180 Query: 181 DFGFGGNNGLTDFKDIIGFNVQAEGTRAALFLLSCLALIIAFLICRAIVTSKLGKVLIAV 240 DFGFGGNNGLTDFKDI+GFNVQA+GTRAALF LSCLALI+ FLICRA+VTSKLGKVLIA+ Sbjct: 181 DFGFGGNNGLTDFKDILGFNVQADGTRAALFALSCLALIVGFLICRAVVTSKLGKVLIAI 240 Query: 241 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPANSIEAVIWV 300 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINP EFAPANSIEAVIWV Sbjct: 241 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPGEFAPANSIEAVIWV 300 Query: 301 AVGGRGTLVGAALGAVVVNYAKTFFTSGPLAPYWLFMLGALFILVTLLLPKGIVGTFSS- 359 AVGGRGTL+GAALGAVVVNYAKT FTSGPLAPYWLFMLGALF+LVTLLLPKGIVGT +S Sbjct: 301 AVGGRGTLIGAALGAVVVNYAKTVFTSGPLAPYWLFMLGALFVLVTLLLPKGIVGTIASW 360 Query: 360 WRETRRSAAIAADRDSAAREDGVGAPNPAE 389 W+ RR+ A + SAAREDGV AP PAE Sbjct: 361 WQRPRRAKATDDNIASAAREDGVIAPKPAE 390 >ref|YP_533554.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gb|ABD89235.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 389 Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/389 (86%), Positives = 364/389 (93%) Query: 1 MTPHILTRSLDRAATAFVLIVAAIGVLIPLSNLLLPQGSMFQVPTYLVALWGKYVCYAIL 60 MTPHILTR+LDR+AT F++IVAA+G+L+PL+NLL P+GS VPTYL+AL+GKYVCYA+L Sbjct: 1 MTPHILTRTLDRSATIFLVIVAAVGILLPLANLLFPEGSALHVPTYLMALFGKYVCYALL 60 Query: 61 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLNWSKL 120 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLN+++L Sbjct: 61 ALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLNYNEL 120 Query: 121 PWYWYGFDKFWFAALMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN 180 PWYWYGFD FWFAALMVL+VPGLLAF FGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN Sbjct: 121 PWYWYGFDMFWFAALMVLVVPGLLAFGFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRN 180 Query: 181 DFGFGGNNGLTDFKDIIGFNVQAEGTRAALFLLSCLALIIAFLICRAIVTSKLGKVLIAV 240 DFGFGGNNGLTDFKDI+GFNVQA+GTRAALF LSCLAL + FLICRA+VTSKLGKVLIA+ Sbjct: 181 DFGFGGNNGLTDFKDILGFNVQADGTRAALFALSCLALALGFLICRAVVTSKLGKVLIAI 240 Query: 241 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPANSIEAVIWV 300 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINP EFAP NSIEAVIWV Sbjct: 241 RDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPGEFAPGNSIEAVIWV 300 Query: 301 AVGGRGTLVGAALGAVVVNYAKTFFTSGPLAPYWLFMLGALFILVTLLLPKGIVGTFSSW 360 AVGGRGTL+GAALGAVVVNYAKT FTSGPLAPYWLFMLGALFILVTLLLPKGI+GTF++W Sbjct: 301 AVGGRGTLIGAALGAVVVNYAKTVFTSGPLAPYWLFMLGALFILVTLLLPKGIIGTFNAW 360 Query: 361 RETRRSAAIAADRDSAAREDGVGAPNPAE 389 E ++ A+ +SAAREDGV P AE Sbjct: 361 WEPWKAKRDNANAESAAREDGVIEPKLAE 389