BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0143.0032.p (442 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_533556.1| branched-chain amino acid uptake ABC transporte... 825 0.0 ref|NP_768088.1| ABC transporter substrate-binding protein [Brad... 820 0.0 ref|ZP_08628404.1| urea ABC transporter, urea binding protein [B... 811 0.0 ref|YP_001203182.1| branched chain amino-acid ABC transporter su... 793 0.0 ref|YP_001242809.1| branched chain amino-acid ABC transporter su... 788 0.0 >ref|YP_533556.1| branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein [Rhodopseudomonas palustris BisB18] gb|ABD89237.1| branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein precursor [Rhodopseudomonas palustris BisB18] Length = 439 Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/443 (91%), Positives = 419/443 (94%), Gaps = 5/443 (1%) Query: 1 MLTQLSH-KITTMTRRRALAATAGLVLGLAASSSLAPAQAADDTIKVGILHSLSGTMAIS 59 MLT+ K ++RRR LAA+AGL+LGLA SS A+DTIKVG+LHSLSGTMAIS Sbjct: 1 MLTEPKQSKAVPISRRRWLAASAGLMLGLATFSS----AKAEDTIKVGVLHSLSGTMAIS 56 Query: 60 ETTLKDTILFLIDEQNKKGGVLGKKLEPVVVDPASNWPLFAEKARELITKDKVAVVFGCW 119 ETTLKDTILFLIDEQNKKGGVLGKKLE VVVDPASNWPLFAEKARELITKDKV+VVFGCW Sbjct: 57 ETTLKDTILFLIDEQNKKGGVLGKKLEAVVVDPASNWPLFAEKARELITKDKVSVVFGCW 116 Query: 120 TSVSRKSVLPVFKELNNILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKEEKVKR 179 TSVSRKSVLPVFKELN+ILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMK+EKVKR Sbjct: 117 TSVSRKSVLPVFKELNSILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKDEKVKR 176 Query: 180 WVLAGTDYVYPRTTNKILEAYLKSKGVAQDDIMINYTPFGHSDWQTIVADIKKFGSAGKK 239 WVLAGTDYVYPRTTNKILEAYLKSKGV +DIMINYTPFGHSDWQTIVADIKKFGSAGKK Sbjct: 177 WVLAGTDYVYPRTTNKILEAYLKSKGVKSEDIMINYTPFGHSDWQTIVADIKKFGSAGKK 236 Query: 240 TAVVSTINGDANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPLLGHLAAWNYFE 299 TAVVSTINGDANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPL+GHLAAWNYF+ Sbjct: 237 TAVVSTINGDANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPLVGHLAAWNYFQ 296 Query: 300 SIKTPENEKFIKAWQAYTKNPKRVTNDPMEAHVIGFDMWVKAVEKVKSTDPDKVIDALPG 359 SIKTPENEKFIKAWQAYTKNPKRVTNDPMEAHVIGFDMWVKAVEK KS D DKVIDALPG Sbjct: 297 SIKTPENEKFIKAWQAYTKNPKRVTNDPMEAHVIGFDMWVKAVEKAKSVDADKVIDALPG 356 Query: 360 IEAKNLTGGTSKMLPNHHITKPVFIGEIKGNGQFDVVWKTPGLVAGDAWSKELEGSKDLI 419 EAKNLTGGTSKMLPNHHITKPVFIGEIK +GQFDVVWKTPGLVAGDAWSKELEGSKDLI Sbjct: 357 TEAKNLTGGTSKMLPNHHITKPVFIGEIKADGQFDVVWKTPGLVAGDAWSKELEGSKDLI 416 Query: 420 GDWVGKKCGNYNTKTNKCGGQGS 442 GDWVGKKCGNYNTKTNKCGGQGS Sbjct: 417 GDWVGKKCGNYNTKTNKCGGQGS 439 >ref|NP_768088.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46713.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 480 Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/445 (91%), Positives = 423/445 (95%), Gaps = 6/445 (1%) Query: 1 MLTQLSHKIT-TMTRRRALAATAGLVLGLAASSSLAPAQAADDTIKVGILHSLSGTMAIS 59 M T+ +H I + +RR LAATAGL+LGLA S++ A+AADDTIKVG+LHSLSGTMAIS Sbjct: 39 MRTKSTHDIAASFSRRGVLAATAGLMLGLA---SISGAKAADDTIKVGVLHSLSGTMAIS 95 Query: 60 ETTLKDTILFLIDEQNKKGGVLGKKLEPVVVDPASNWPLFAEKARELITKDKVAVVFGCW 119 ETTLKDTILFLIDEQNKKGGVLGKKLE VVVDPASNWPLFAEKARELITKDKV+VVFGCW Sbjct: 96 ETTLKDTILFLIDEQNKKGGVLGKKLEAVVVDPASNWPLFAEKARELITKDKVSVVFGCW 155 Query: 120 TSVSRKSVLPVFKELNNILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKEEKVKR 179 TSVSRKSVLPVFKELNNILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMK+EKVKR Sbjct: 156 TSVSRKSVLPVFKELNNILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKDEKVKR 215 Query: 180 WVLAGTDYVYPRTTNKILEAYLKSKGVAQDDIMINYTPFGHSDWQTIVADIKKFGSAGKK 239 WVLAGTDYVYPRTTNKILEAYLKSKGVAQ+DIMINYTPFGHSDWQTIVADIKKFGSAGKK Sbjct: 216 WVLAGTDYVYPRTTNKILEAYLKSKGVAQEDIMINYTPFGHSDWQTIVADIKKFGSAGKK 275 Query: 240 TAVVSTINGDANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPLLGHLAAWNYFE 299 TAVVSTINGDANVPFYKELGNQGIKA DIPVVAFSVGEEELAGIDTKPL+GHLAAWNYFE Sbjct: 276 TAVVSTINGDANVPFYKELGNQGIKAKDIPVVAFSVGEEELAGIDTKPLVGHLAAWNYFE 335 Query: 300 SIKTPE--NEKFIKAWQAYTKNPKRVTNDPMEAHVIGFDMWVKAVEKVKSTDPDKVIDAL 357 SIKT + NEKFIK WQAYTKNPKRVTNDPMEAHVIGF+MWVKAVEKVKSTDPDKVIDAL Sbjct: 336 SIKTKDGSNEKFIKDWQAYTKNPKRVTNDPMEAHVIGFNMWVKAVEKVKSTDPDKVIDAL 395 Query: 358 PGIEAKNLTGGTSKMLPNHHITKPVFIGEIKGNGQFDVVWKTPGLVAGDAWSKELEGSKD 417 PGIEA NLTGG SKMLPNHHITKPVFIGEIKGNGQFDVVWKTPGLVAGDAWSKEL+GSKD Sbjct: 396 PGIEAPNLTGGVSKMLPNHHITKPVFIGEIKGNGQFDVVWKTPGLVAGDAWSKELDGSKD 455 Query: 418 LIGDWVGKKCGNYNTKTNKCGGQGS 442 LIGDWVGKKCGN+NTKTNKC G GS Sbjct: 456 LIGDWVGKKCGNFNTKTNKCLGSGS 480 >ref|ZP_08628404.1| urea ABC transporter, urea binding protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08907.1| urea ABC transporter, urea binding protein [Bradyrhizobiaceae bacterium SG-6C] Length = 439 Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/434 (91%), Positives = 412/434 (94%), Gaps = 4/434 (0%) Query: 9 ITTMTRRRALAATAGLVLGLAASSSLAPAQAADDTIKVGILHSLSGTMAISETTLKDTIL 68 + +RR+ LAATAGL LGLA S+ A+A DTIKVG+LHSLSGTMAISETTLKDTIL Sbjct: 10 VAPFSRRKWLAATAGLFLGLA---SIGGAKA-QDTIKVGVLHSLSGTMAISETTLKDTIL 65 Query: 69 FLIDEQNKKGGVLGKKLEPVVVDPASNWPLFAEKARELITKDKVAVVFGCWTSVSRKSVL 128 FLIDEQNKKGGVLGKKLE VVVDPASNWPLFAEKARELITKDKV+VVFGCWTSVSRKSVL Sbjct: 66 FLIDEQNKKGGVLGKKLEAVVVDPASNWPLFAEKARELITKDKVSVVFGCWTSVSRKSVL 125 Query: 129 PVFKELNNILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKEEKVKRWVLAGTDYV 188 PVFKELN+ILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKEEKVKRWVLAGTDYV Sbjct: 126 PVFKELNSILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKEEKVKRWVLAGTDYV 185 Query: 189 YPRTTNKILEAYLKSKGVAQDDIMINYTPFGHSDWQTIVADIKKFGSAGKKTAVVSTING 248 YPRTTNKILEAYLKSKGV Q+DIMINYTPFGHSDWQTIVADIKKFGSAGKKTAVVSTING Sbjct: 186 YPRTTNKILEAYLKSKGVKQEDIMINYTPFGHSDWQTIVADIKKFGSAGKKTAVVSTING 245 Query: 249 DANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPLLGHLAAWNYFESIKTPENEK 308 DANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPL+GHLAAWNYFESIKTPENE Sbjct: 246 DANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPLVGHLAAWNYFESIKTPENEA 305 Query: 309 FIKAWQAYTKNPKRVTNDPMEAHVIGFDMWVKAVEKVKSTDPDKVIDALPGIEAKNLTGG 368 FIK+WQAYTKNPKRVTNDPMEAHVIGF+MWVKAVEK KS DPDKVIDALPG + NLTGG Sbjct: 306 FIKSWQAYTKNPKRVTNDPMEAHVIGFNMWVKAVEKAKSVDPDKVIDALPGTKTANLTGG 365 Query: 369 TSKMLPNHHITKPVFIGEIKGNGQFDVVWKTPGLVAGDAWSKELEGSKDLIGDWVGKKCG 428 S+MLPNHHITKPVFIGEIK +GQFDVVWKTPGLVAGDAWSKELEGSKDLIGDWVGKKCG Sbjct: 366 VSEMLPNHHITKPVFIGEIKADGQFDVVWKTPGLVAGDAWSKELEGSKDLIGDWVGKKCG 425 Query: 429 NYNTKTNKCGGQGS 442 N+NTKTNKCGGQGS Sbjct: 426 NFNTKTNKCGGQGS 439 >ref|YP_001203182.1| branched chain amino-acid ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL74945.1| Putative branched-chain amino acid ABC transporter (substrate-binding protein) [Bradyrhizobium sp. ORS 278] Length = 440 Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/443 (89%), Positives = 413/443 (93%), Gaps = 4/443 (0%) Query: 1 MLTQLSHKITT-MTRRRALAATAGLVLGLAASSSLAPAQAADDTIKVGILHSLSGTMAIS 59 MLT+L+ ++T +RRR LAA AGL ++ PA AADDTIKVG+LHSLSGTMAIS Sbjct: 1 MLTRLTQELTAPFSRRRWLAAAAGLA---LGAAGFGPAMAADDTIKVGVLHSLSGTMAIS 57 Query: 60 ETTLKDTILFLIDEQNKKGGVLGKKLEPVVVDPASNWPLFAEKARELITKDKVAVVFGCW 119 ETTLKDTILFLIDEQNKKGGVLGKKLE VVVDPASNWPLFAEKARELITKDKV+VVFGCW Sbjct: 58 ETTLKDTILFLIDEQNKKGGVLGKKLEAVVVDPASNWPLFAEKARELITKDKVSVVFGCW 117 Query: 120 TSVSRKSVLPVFKELNNILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKEEKVKR 179 TSVSRKSVLPVFKELN+ILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKEEKVKR Sbjct: 118 TSVSRKSVLPVFKELNSILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKEEKVKR 177 Query: 180 WVLAGTDYVYPRTTNKILEAYLKSKGVAQDDIMINYTPFGHSDWQTIVADIKKFGSAGKK 239 WVLAGTDYVYPRTTNKILEAYLKSKGVAQ+DIMINYTPFGHSDWQTIVADIKKFGSAGKK Sbjct: 178 WVLAGTDYVYPRTTNKILEAYLKSKGVAQEDIMINYTPFGHSDWQTIVADIKKFGSAGKK 237 Query: 240 TAVVSTINGDANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPLLGHLAAWNYFE 299 TAVVSTINGDANVPFYKELGNQGIKA DIPVVAFSVGEEELAGIDTKPL+GHLAAWNYFE Sbjct: 238 TAVVSTINGDANVPFYKELGNQGIKAKDIPVVAFSVGEEELAGIDTKPLVGHLAAWNYFE 297 Query: 300 SIKTPENEKFIKAWQAYTKNPKRVTNDPMEAHVIGFDMWVKAVEKVKSTDPDKVIDALPG 359 SIKTP NEKFIK WQAYTKNPKRVTNDPMEAHVIGF+MWVKAVEKVKSTDPDKVIDALPG Sbjct: 298 SIKTPANEKFIKEWQAYTKNPKRVTNDPMEAHVIGFNMWVKAVEKVKSTDPDKVIDALPG 357 Query: 360 IEAKNLTGGTSKMLPNHHITKPVFIGEIKGNGQFDVVWKTPGLVAGDAWSKELEGSKDLI 419 EA NLTGG SKMLPNHHITKPVFIGEIKG+GQF VV+KT LV GDAWSKELEGSKDLI Sbjct: 358 TEAPNLTGGVSKMLPNHHITKPVFIGEIKGDGQFSVVYKTKDLVPGDAWSKELEGSKDLI 417 Query: 420 GDWVGKKCGNYNTKTNKCGGQGS 442 GDWVGKKCGNYN KTNKC G G+ Sbjct: 418 GDWVGKKCGNYNVKTNKCLGSGT 440 >ref|YP_001242809.1| branched chain amino-acid ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ38903.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Bradyrhizobium sp. BTAi1] Length = 440 Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/443 (89%), Positives = 412/443 (93%), Gaps = 4/443 (0%) Query: 1 MLTQLSHKITT-MTRRRALAATAGLVLGLAASSSLAPAQAADDTIKVGILHSLSGTMAIS 59 MLT+L+ ++T +RRR LAA AGL ++ PA AADDTIK+G+LHSLSGTMAIS Sbjct: 1 MLTRLTQELTAPFSRRRWLAAAAGLA---LGAAGFGPAMAADDTIKIGVLHSLSGTMAIS 57 Query: 60 ETTLKDTILFLIDEQNKKGGVLGKKLEPVVVDPASNWPLFAEKARELITKDKVAVVFGCW 119 ETTLKDTILFLIDEQNKKGGVLGKKLE VVVDPASNWPLFAEKARELITK+KVAVVFGCW Sbjct: 58 ETTLKDTILFLIDEQNKKGGVLGKKLEAVVVDPASNWPLFAEKARELITKNKVAVVFGCW 117 Query: 120 TSVSRKSVLPVFKELNNILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKEEKVKR 179 TSVSRKSVLPVFKELN+ILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKEEKVKR Sbjct: 118 TSVSRKSVLPVFKELNSILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLMKEEKVKR 177 Query: 180 WVLAGTDYVYPRTTNKILEAYLKSKGVAQDDIMINYTPFGHSDWQTIVADIKKFGSAGKK 239 WVLAGTDYVYPRTTNKILEAYLKSKGVAQDDIMINYTPFGHSDWQTIVADIKKFGSAGKK Sbjct: 178 WVLAGTDYVYPRTTNKILEAYLKSKGVAQDDIMINYTPFGHSDWQTIVADIKKFGSAGKK 237 Query: 240 TAVVSTINGDANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPLLGHLAAWNYFE 299 TAVVSTINGDANVPFYKELGNQGIKA DIPVVAFSVGEEELAGIDTKPL+GHLAAWNYFE Sbjct: 238 TAVVSTINGDANVPFYKELGNQGIKAKDIPVVAFSVGEEELAGIDTKPLVGHLAAWNYFE 297 Query: 300 SIKTPENEKFIKAWQAYTKNPKRVTNDPMEAHVIGFDMWVKAVEKVKSTDPDKVIDALPG 359 SIKTP NEKFIK WQAYTKNPKRVTNDPMEAHVIGF+MWVKAVEKVKSTD DKVIDALPG Sbjct: 298 SIKTPANEKFIKDWQAYTKNPKRVTNDPMEAHVIGFNMWVKAVEKVKSTDADKVIDALPG 357 Query: 360 IEAKNLTGGTSKMLPNHHITKPVFIGEIKGNGQFDVVWKTPGLVAGDAWSKELEGSKDLI 419 EA NLTGG SKMLPNHHITKPVFIGEIKG+GQF VV+KT LV GDAWSKELEGSKDLI Sbjct: 358 TEAPNLTGGVSKMLPNHHITKPVFIGEIKGDGQFSVVYKTKDLVPGDAWSKELEGSKDLI 417 Query: 420 GDWVGKKCGNYNTKTNKCGGQGS 442 GDWVGKKCGN+N KTNKC G G+ Sbjct: 418 GDWVGKKCGNFNVKTNKCLGSGT 440