BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0143.0028.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242813.1| hypothetical protein BBta_7023 [Bradyrhizobi... 233 1e-59 ref|YP_485409.1| hypothetical protein RPB_1790 [Rhodopseudomonas... 223 2e-56 ref|YP_001203178.1| hypothetical protein BRADO1027 [Bradyrhizobi... 223 2e-56 ref|NP_949011.1| hypothetical protein RPA3673 [Rhodopseudomonas ... 203 1e-50 ref|YP_316926.1| Flp pilus assembly protein TadG [Nitrobacter wi... 201 6e-50 >ref|YP_001242813.1| hypothetical protein BBta_7023 [Bradyrhizobium sp. BTAi1] gb|ABQ38907.1| hypothetical protein BBta_7023 [Bradyrhizobium sp. BTAi1] Length = 184 Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 117/194 (60%), Positives = 144/194 (74%), Gaps = 16/194 (8%) Query: 12 LLRSVAALCNDRRGLAAVEFAFVLPLMLVLFFGTVEFSSGVAVDRKVTLMARAASDLTSQ 71 LLR + A D+RG+AA EFAF++PLMLV+FFGTVEF SG+AVDRKVTLMAR SDLTSQ Sbjct: 5 LLRRLGAFGADKRGIAATEFAFIVPLMLVMFFGTVEFCSGIAVDRKVTLMARTLSDLTSQ 64 Query: 72 STQVVDADLQNFFSASVGIMTPYDPTPTKVTLSEIYVDASKV-ARIQWSKAGVMATGATQ 130 ST V D+D+ NFF+AS GIM PY TP T++E+YVD + A + WSK Sbjct: 65 STSVGDSDMSNFFAASTGIMYPYSTTPVNATITELYVDPKTMQATVMWSKG--------- 115 Query: 131 ATLTASSRSQGDVVTSVVPAALLVAGTYLIFSEVSYKYVPTVGYVMAKSGINLTDVAFTR 190 ++ RS G V VPA LLV+GTYLIFSEV+Y+YVPT+GYVMAK+GI L+DVA+TR Sbjct: 116 ----SAPRSSGTTVG--VPADLLVSGTYLIFSEVNYQYVPTIGYVMAKTGIKLSDVAYTR 169 Query: 191 PRQSVCVFYAPTSA 204 PRQS CVFY+P ++ Sbjct: 170 PRQSTCVFYSPKTS 183 >ref|YP_485409.1| hypothetical protein RPB_1790 [Rhodopseudomonas palustris HaA2] gb|ABD06498.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 206 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 114/197 (57%), Positives = 142/197 (72%), Gaps = 10/197 (5%) Query: 19 LCNDRRGLAAVEFAFVLPLMLVLFFGTVEFSSGVAVDRKVTLMARAASDLTSQSTQVVDA 78 L DR GLAA EFAF++PLML++FF TVE S+G+AVDRKVTL++R SDL SQ+T V D+ Sbjct: 18 LAKDRSGLAATEFAFIVPLMLLMFFATVELSAGIAVDRKVTLVSRTLSDLVSQATTVTDS 77 Query: 79 DLQNFFSASVGIMTPYDPTPTKVTLSEIYVDASKVARIQWSKAGVMA-TGAT-QATLTAS 136 DL+N F+AS G++ PY + T+SEIYV+ + VA++QWSKA +A +G+T ATL S Sbjct: 78 DLKNVFAASYGVLAPYPTSTADATISEIYVNDAGVAKVQWSKAATVAQSGSTATATLATS 137 Query: 137 SRSQGDVVTSVVPAALLVAGTYLIFSEVSYKYVPTVGYVMAKSGINLTDVAFTRPRQSVC 196 SR QGD +T +P L VA TYLIFSEV YKY P VGY +AK+GINLTD +TRPRQS C Sbjct: 138 SRKQGDTIT--IPDGLKVAKTYLIFSEVKYKYEPAVGYFVAKAGINLTDQTYTRPRQSTC 195 Query: 197 VFYAPTSATMPTTCSTY 213 V Y S C TY Sbjct: 196 VLYGTAS------CPTY 206 >ref|YP_001203178.1| hypothetical protein BRADO1027 [Bradyrhizobium sp. ORS 278] emb|CAL74941.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 192 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 117/205 (57%), Positives = 141/205 (68%), Gaps = 16/205 (7%) Query: 1 MNNVMKARAAALLRSVAALCNDRRGLAAVEFAFVLPLMLVLFFGTVEFSSGVAVDRKVTL 60 M V + R R + D G+AA EFAF++PLMLV+FFGTVEF S +AVDRKVTL Sbjct: 1 MCFVERPRPKMQFRLLRRFRADHSGVAATEFAFIVPLMLVMFFGTVEFCSAIAVDRKVTL 60 Query: 61 MARAASDLTSQSTQVVDADLQNFFSASVGIMTPYDPTPTKVTLSEIYVDAS-KVARIQWS 119 MAR SDLTSQST V D+D+ NFF+AS GIM PY +P T+SEI VD++ K A + WS Sbjct: 61 MARTLSDLTSQSTSVGDSDMSNFFAASTGIMYPYSTSPVNATISEIVVDSTGKQATVVWS 120 Query: 120 KAGVMATGATQATLTASSRSQGDVVTSVVPAALLVAGTYLIFSEVSYKYVPTVGYVMAKS 179 K V T T T +PA LLVA TYLIFSEVSY+YVPT+GYVMAK+ Sbjct: 121 KGSVPRTTGT---------------TVGIPADLLVANTYLIFSEVSYQYVPTIGYVMAKT 165 Query: 180 GINLTDVAFTRPRQSVCVFYAPTSA 204 GINL+DVA+TRPRQS CVFY+P ++ Sbjct: 166 GINLSDVAYTRPRQSTCVFYSPKTS 190 >ref|NP_949011.1| hypothetical protein RPA3673 [Rhodopseudomonas palustris CGA009] ref|YP_001993166.1| TadE family protein [Rhodopseudomonas palustris TIE-1] emb|CAE29114.1| conserved unknown protein [Rhodopseudomonas palustris CGA009] gb|ACF02691.1| TadE family protein [Rhodopseudomonas palustris TIE-1] Length = 208 Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 98/180 (54%), Positives = 134/180 (74%), Gaps = 4/180 (2%) Query: 25 GLAAVEFAFVLPLMLVLFFGTVEFSSGVAVDRKVTLMARAASDLTSQSTQVVDADLQNFF 84 G+AA+EFA ++P+MLV+F TVE +SG+AVDRKVTL+AR SDL SQ+T V D DL+N F Sbjct: 26 GVAAIEFAIIVPVMLVMFLATVEVTSGIAVDRKVTLVARTLSDLVSQATSVTDNDLKNVF 85 Query: 85 SASVGIMTPYDPTPTKVTLSEIYVDASKVARIQWSKAGVM--ATGATQATLTASSRSQGD 142 +AS G++TPY TP K T++EI+V+ ++VA +QWSK G + + G+ AT+ S+R GD Sbjct: 86 AASYGVLTPYAATPVKATITEIFVNKNQVATVQWSKTGTVTQSGGSATATVANSTRQAGD 145 Query: 143 VVTSVVPAALLVAGTYLIFSEVSYKYVPTVGYVMAKSGINLTDVAFTRPRQSVCVFYAPT 202 + +P L VA TYLI SEVSY+Y PTV Y + ++GI+LTD ++TRPRQS+CV Y T Sbjct: 146 TI--AIPDGLKVANTYLILSEVSYQYQPTVAYFIPQAGISLTDQSYTRPRQSLCVLYGTT 203 >ref|YP_316926.1| Flp pilus assembly protein TadG [Nitrobacter winogradskyi Nb-255] gb|ABA03574.1| Flp pilus assembly protein TadG [Nitrobacter winogradskyi Nb-255] Length = 242 Score = 201 bits (511), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 110/195 (56%), Positives = 132/195 (67%), Gaps = 9/195 (4%) Query: 17 AALCNDRRGLAAVEFAFVLPLMLVLFFGTVEFSSGVAVDRKVTLMARAASDLTSQSTQVV 76 +AL D RGLAA EFA ++PLMLV+ FGT+E SSGVAV+RKVTL+AR SDLTSQS V Sbjct: 55 SALRRDTRGLAATEFAMIVPLMLVMLFGTIEVSSGVAVNRKVTLVARTLSDLTSQSKVVN 114 Query: 77 DADLQNFFSASVGIMTPYDPTPTKVTLSEIYVD-ASKVARIQWSKAGVMATGATQATLTA 135 DAD+ NF +AS GIM PY P + T+SE+Y+D A+ VAR+QWSK G GA Sbjct: 115 DADVTNFLAASYGIMWPYSSAPVQATISELYIDPATSVARVQWSK-GKAPRGAGSTVSIP 173 Query: 136 SSRSQGDVVTSVVPAALLVAGTYLIFSEVSYKYVPTVGYVMAKSGINLTDVAFTRPRQSV 195 S D V+P YLIFSEVSY Y P +GYVM+K+GI L+D AFTRPRQS Sbjct: 174 SGLIGRDSSGKVLP------NQYLIFSEVSYIYEPVLGYVMSKAGIRLSDTAFTRPRQSA 227 Query: 196 CVFYA-PTSATMPTT 209 CVF+ P+S PTT Sbjct: 228 CVFFGNPSSIICPTT 242