BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0143.0027.p (189 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_570639.1| TadE-like [Rhodopseudomonas palustris BisB5] >g... 235 2e-60 ref|YP_485408.1| TadE-like [Rhodopseudomonas palustris HaA2] >gi... 229 1e-58 ref|NP_949012.1| hypothetical protein RPA3674 [Rhodopseudomonas ... 220 7e-56 ref|YP_575747.1| TadE-like [Nitrobacter hamburgensis X14] >gi|91... 212 2e-53 ref|YP_316925.1| Flp pilus assembly protein TadG [Nitrobacter wi... 212 2e-53 >ref|YP_570639.1| TadE-like [Rhodopseudomonas palustris BisB5] gb|ABE40738.1| TadE-like [Rhodopseudomonas palustris BisB5] Length = 181 Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/180 (62%), Positives = 142/180 (78%), Gaps = 3/180 (1%) Query: 1 MPLPAHSFARLLHRFRRNRRGATAVEFAMVAPLFFGLLFAIIEVAMIFFASQVLETVTQD 60 M L A L+ RF RNRRG+ A+EFA++AP+FFGLLFAIIEVA++FFA QVLET QD Sbjct: 2 MSLFVSRAAVLMRRFGRNRRGSAAIEFALIAPIFFGLLFAIIEVALMFFAGQVLETAVQD 61 Query: 61 SARMIMTGQAQGASYTQQQFKNFVCGQVSALFDCANGISVDVRSYPAATGFSSVNIAPPI 120 SAR+I+TGQAQG S++Q +F++ VCG++ LF C+ G+ VDV+SY T FS V+I+PPI Sbjct: 62 SARLILTGQAQGGSFSQSKFRDDVCGRLGGLFTCS-GVFVDVQSY--GTDFSKVDISPPI 118 Query: 121 DSNNAFIPTMKWCPGKDGDVVVVRLFYQWPLFVTKLGFNVANLANGKRLLTATATFKNEP 180 D+N F+ MK+ PG+ GDVVVVR FYQWPLFVT LG+NVANL+ KRLL ATA F+NEP Sbjct: 119 DANKNFVDNMKYAPGQAGDVVVVRAFYQWPLFVTGLGYNVANLSGSKRLLIATAAFRNEP 178 >ref|YP_485408.1| TadE-like [Rhodopseudomonas palustris HaA2] gb|ABD06497.1| TadE-like [Rhodopseudomonas palustris HaA2] Length = 181 Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 109/170 (64%), Positives = 134/170 (78%), Gaps = 3/170 (1%) Query: 11 LLHRFRRNRRGATAVEFAMVAPLFFGLLFAIIEVAMIFFASQVLETVTQDSARMIMTGQA 70 L RF RNRRG+ A+EFAM+AP+F LLFAIIE A +F ASQVLET QDSAR+I+TGQA Sbjct: 12 LARRFSRNRRGSAAIEFAMIAPIFIALLFAIIETAFVFLASQVLETAVQDSARLILTGQA 71 Query: 71 QGASYTQQQFKNFVCGQVSALFDCANGISVDVRSYPAATGFSSVNIAPPIDSNNAFIPTM 130 Q ASYTQ QFK +C ++ ALF C +G+ VDV+SY + FS+V+I PIDS+ F+ TM Sbjct: 72 QAASYTQSQFKTDLCNRLKALFSC-DGVYVDVQSY--GSDFSTVSITTPIDSSKNFVNTM 128 Query: 131 KWCPGKDGDVVVVRLFYQWPLFVTKLGFNVANLANGKRLLTATATFKNEP 180 K+ PG GD+VVVR FYQWPLFVT LG+N+ANLA+ KRLL+ATA F+NEP Sbjct: 129 KYSPGAAGDIVVVRAFYQWPLFVTGLGWNIANLADSKRLLSATAAFRNEP 178 >ref|NP_949012.1| hypothetical protein RPA3674 [Rhodopseudomonas palustris CGA009] ref|YP_001993167.1| TadE family protein [Rhodopseudomonas palustris TIE-1] emb|CAE29115.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] gb|ACF02692.1| TadE family protein [Rhodopseudomonas palustris TIE-1] Length = 177 Score = 220 bits (561), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 110/177 (62%), Positives = 137/177 (77%), Gaps = 6/177 (3%) Query: 4 PAHSFARLLHRFRRNRRGATAVEFAMVAPLFFGLLFAIIEVAMIFFASQVLETVTQDSAR 63 PA + AR +FRRNR+G+ AVEFA+VAP+FF LLFAIIEVAMIFFASQVLET QDS+R Sbjct: 7 PARAMAR---KFRRNRKGSAAVEFAIVAPIFFALLFAIIEVAMIFFASQVLETAVQDSSR 63 Query: 64 MIMTGQAQGASYTQQQFKNFVCGQVSALFDCANGISVDVRSYPAATGFSSVNIAPPIDSN 123 +I T QAQ AS TQ QFK VC ++ +LFDC+ + VDV++Y + F +V+I PIDSN Sbjct: 64 LIFTRQAQDASMTQDQFKTEVCKRLISLFDCSI-VRVDVQNY--GSDFGTVSITTPIDSN 120 Query: 124 NAFIPTMKWCPGKDGDVVVVRLFYQWPLFVTKLGFNVANLANGKRLLTATATFKNEP 180 F+ M++ GK GD++VVR FYQWPLFVT LGF+ +NLA GKRLL+ATA F+NEP Sbjct: 121 KKFVDNMQYNIGKAGDIIVVRAFYQWPLFVTGLGFDTSNLAGGKRLLSATAAFRNEP 177 >ref|YP_575747.1| TadE-like [Nitrobacter hamburgensis X14] gb|ABE61287.1| TadE-like protein [Nitrobacter hamburgensis X14] Length = 189 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 110/178 (61%), Positives = 126/178 (70%), Gaps = 8/178 (4%) Query: 9 ARLLHRFRRNRRGATAVEFAMVAPLFFGLLFAIIEVAMIFFASQVLETVTQDSARMIMTG 68 AR+ RFR N+RG+ AVEFA+VAPLFF LLFAIIE M+FFASQ LET QDSARMI TG Sbjct: 12 ARVAGRFRGNQRGSAAVEFALVAPLFFALLFAIIETGMVFFASQSLETTLQDSARMIQTG 71 Query: 69 QAQGASYTQQQF-KNFVCGQVSALFDCANGISVDVRSYPAATGFSSVNI-----APPIDS 122 QAQ A Y + F K+ VC S LFDC NGI VDV SYP +GF SV I A PI Sbjct: 72 QAQIAKYDKASFKKDVVCANASVLFDCENGIFVDVHSYP--SGFGSVEIDDSITADPITG 129 Query: 123 NNAFIPTMKWCPGKDGDVVVVRLFYQWPLFVTKLGFNVANLANGKRLLTATATFKNEP 180 + F+ ++ G GD+VVVRLFYQWPLFVT LG+N+ANL+ KRLL AT FKNEP Sbjct: 130 DRNFVDNTQYSAGGPGDIVVVRLFYQWPLFVTGLGYNLANLSGSKRLLAATVAFKNEP 187 >ref|YP_316925.1| Flp pilus assembly protein TadG [Nitrobacter winogradskyi Nb-255] gb|ABA03573.1| Flp pilus assembly protein TadG [Nitrobacter winogradskyi Nb-255] Length = 186 Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 105/173 (60%), Positives = 131/173 (75%), Gaps = 4/173 (2%) Query: 9 ARLLHRFRRNRRGATAVEFAMVAPLFFGLLFAIIEVAMIFFASQVLETVTQDSARMIMTG 68 AR+ RF ++ G+ AVEFA+VAP+FF LLFAIIE ++FFASQ LET QDSAR IMTG Sbjct: 11 ARMAARFPGHKSGSAAVEFALVAPMFFALLFAIIETGLVFFASQSLETALQDSARTIMTG 70 Query: 69 QAQGASYTQQQFK-NFVCGQVSALFDCANGISVDVRSYPAATGFSSVNIAPPIDSNNAFI 127 +AQ + T+Q FK N VC V+ LFDC NGI VDV+SYP +GF SV I+ PI + +F+ Sbjct: 71 EAQITNLTKQSFKANVVCANVNVLFDCENGIYVDVQSYP--SGFGSVTISDPI-AGGSFV 127 Query: 128 PTMKWCPGKDGDVVVVRLFYQWPLFVTKLGFNVANLANGKRLLTATATFKNEP 180 ++ PG GD+VVVRLFYQWPL+VT LG+N+ANL+ KRLL+ATA FKNEP Sbjct: 128 DNTQYNPGGPGDIVVVRLFYQWPLYVTGLGYNIANLSGSKRLLSATAAFKNEP 180