BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0143.0026.p         (168 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_575746.1| hypothetical protein Nham_0395 [Nitrobacter ham...   223   9e-57
ref|YP_001203176.1| hypothetical protein BRADO1025 [Bradyrhizobi...   216   1e-54
ref|NP_768084.1| hypothetical protein blr1444 [Bradyrhizobium ja...   213   7e-54
ref|ZP_01044490.1| hypothetical protein NB311A_03149 [Nitrobacte...   213   7e-54
ref|YP_316924.1| hypothetical protein Nwi_0305 [Nitrobacter wino...   212   1e-53

>ref|YP_575746.1| hypothetical protein Nham_0395 [Nitrobacter hamburgensis X14]
 gb|ABE61286.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 161

 Score =  223 bits (567), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 112/160 (70%), Positives = 132/160 (82%)

Query: 1   MSFQSQRIRAVARIGFISLAAAVLLWPAFATAAPDPDRIAVNVDQAKLVKLPGGISTIVV 60
           M F+  R R+ A +  +SLA A+LL P  A A    D I+VNVDQAKLVKLPG I+TIVV
Sbjct: 1   MWFKFLRGRSRASVVGLSLATAILLGPTAALAEVTSDPISVNVDQAKLVKLPGHIATIVV 60

Query: 61  GNPLIADVTLQNGGVVVVTGKGYGATNFIALDRSGQVLVDRQIQVEGPTDQLVTVYRGVD 120
           GNPLIADVTLQ GG+VVVTGKGYGATN IA+DR+G +LVDR IQVEGP+DQ+VTVYRGV+
Sbjct: 61  GNPLIADVTLQPGGLVVVTGKGYGATNVIAMDRAGSILVDRVIQVEGPSDQVVTVYRGVE 120

Query: 121 RETYSCMPVCQRRITLGDGETYFKSTMDQAGSLNSQASGS 160
           RE+YSCMPVCQ+RITLGD   YFK+TMDQA +L+SQA G+
Sbjct: 121 RESYSCMPVCQKRITLGDSVAYFKATMDQASNLSSQAGGA 160


>ref|YP_001203176.1| hypothetical protein BRADO1025 [Bradyrhizobium sp. ORS 278]
 emb|CAL74939.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 145

 Score =  216 bits (549), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 99/130 (76%), Positives = 120/130 (92%)

Query: 39  IAVNVDQAKLVKLPGGISTIVVGNPLIADVTLQNGGVVVVTGKGYGATNFIALDRSGQVL 98
           IAVNVDQAKLVKLP  ++T+VVGNP+IADVTLQ+GG++VVTGK YGATNFIA+DR GQVL
Sbjct: 16  IAVNVDQAKLVKLPDRVATLVVGNPMIADVTLQSGGIIVVTGKSYGATNFIAMDRGGQVL 75

Query: 99  VDRQIQVEGPTDQLVTVYRGVDRETYSCMPVCQRRITLGDGETYFKSTMDQAGSLNSQAS 158
           +DRQIQV GPTD+LVTVYRGVDRETYSCMP+CQRR+TLGDG++YFKS +DQAG+++SQA+
Sbjct: 76  IDRQIQVAGPTDRLVTVYRGVDRETYSCMPICQRRVTLGDGDSYFKSVLDQAGTMSSQAA 135

Query: 159 GSGAAAKPQN 168
           G+ A+A   N
Sbjct: 136 GNAASAPKTN 145


>ref|NP_768084.1| hypothetical protein blr1444 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46709.1| blr1444 [Bradyrhizobium japonicum USDA 110]
          Length = 165

 Score =  213 bits (543), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 100/137 (72%), Positives = 118/137 (86%)

Query: 32  AAPDPDRIAVNVDQAKLVKLPGGISTIVVGNPLIADVTLQNGGVVVVTGKGYGATNFIAL 91
           A    D IAVNVDQAKLV+LPG ++TIVVGNPLIADVTLQ GG++VVTGKGYGATNFIAL
Sbjct: 29  AESTADTIAVNVDQAKLVRLPGKVATIVVGNPLIADVTLQPGGMIVVTGKGYGATNFIAL 88

Query: 92  DRSGQVLVDRQIQVEGPTDQLVTVYRGVDRETYSCMPVCQRRITLGDGETYFKSTMDQAG 151
           DR G++LVDRQIQVEGP+D+LVTVYRGV+RE+YSCMP+CQRR+TLGD + +F +TM QAG
Sbjct: 89  DRGGEILVDRQIQVEGPSDRLVTVYRGVERESYSCMPICQRRVTLGDSDNFFNTTMSQAG 148

Query: 152 SLNSQASGSGAAAKPQN 168
           SL+S ASG+  A    N
Sbjct: 149 SLSSNASGNAGAGAKTN 165


>ref|ZP_01044490.1| hypothetical protein NB311A_03149 [Nitrobacter sp. Nb-311A]
 gb|EAQ37271.1| hypothetical protein NB311A_03149 [Nitrobacter sp. Nb-311A]
          Length = 163

 Score =  213 bits (542), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 105/157 (66%), Positives = 129/157 (82%)

Query: 1   MSFQSQRIRAVARIGFISLAAAVLLWPAFATAAPDPDRIAVNVDQAKLVKLPGGISTIVV 60
           M F+S    + A +  +SLAA +LL P  A A    + I+VNVDQAKLV+LPG I+TIVV
Sbjct: 1   MWFKSLHGPSRASVIGMSLAAVMLLGPVAAPAEVTSEPISVNVDQAKLVRLPGHIATIVV 60

Query: 61  GNPLIADVTLQNGGVVVVTGKGYGATNFIALDRSGQVLVDRQIQVEGPTDQLVTVYRGVD 120
           GNPLIADVTLQ GG+VVVTGKGYGATN IA+DR+G +LVDR IQVEGP+DQ+VTVYRG++
Sbjct: 61  GNPLIADVTLQPGGLVVVTGKGYGATNVIAMDRAGSILVDRVIQVEGPSDQVVTVYRGLE 120

Query: 121 RETYSCMPVCQRRITLGDGETYFKSTMDQAGSLNSQA 157
           RE+YSCMP+CQ+R+TLGD   YFK+TMDQA +L+SQA
Sbjct: 121 RESYSCMPICQKRVTLGDSTAYFKATMDQANNLSSQA 157


>ref|YP_316924.1| hypothetical protein Nwi_0305 [Nitrobacter winogradskyi Nb-255]
 gb|ABA03572.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 163

 Score =  212 bits (540), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 105/159 (66%), Positives = 130/159 (81%)

Query: 1   MSFQSQRIRAVARIGFISLAAAVLLWPAFATAAPDPDRIAVNVDQAKLVKLPGGISTIVV 60
           M F+  R R+   +  +S AAA+LL  A A A    + I+VNVDQAKLV+LPG I+TIVV
Sbjct: 1   MWFKFVRGRSRVSVIGVSFAAAILLGAATAPAEVISEPISVNVDQAKLVRLPGPIATIVV 60

Query: 61  GNPLIADVTLQNGGVVVVTGKGYGATNFIALDRSGQVLVDRQIQVEGPTDQLVTVYRGVD 120
           GNPLIADVTLQ GG+VVVTGKGYGATN IA+DR+G ++VDR IQVEGP+DQ+VTVYRG++
Sbjct: 61  GNPLIADVTLQPGGLVVVTGKGYGATNMIAMDRAGSIMVDRVIQVEGPSDQVVTVYRGLE 120

Query: 121 RETYSCMPVCQRRITLGDGETYFKSTMDQAGSLNSQASG 159
           RE+YSCMP+CQ+R+TLGD   YFK+TMDQA +L+SQA G
Sbjct: 121 RESYSCMPICQKRVTLGDSAAYFKATMDQASNLSSQAGG 159