BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0143.0018.p (376 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242822.1| putative pilus assembly protein CpaE [Bradyr... 689 0.0 ref|NP_768077.1| pilus assembly protein [Bradyrhizobium japonicu... 687 0.0 ref|YP_533569.1| putative pilus assembly protein cpaE [Rhodopseu... 687 0.0 ref|YP_570646.1| putative pilus assembly protein cpaE [Rhodopseu... 683 0.0 ref|YP_001203169.1| putative pilus assembly protein CpaE [Bradyr... 682 0.0 >ref|YP_001242822.1| putative pilus assembly protein CpaE [Bradyrhizobium sp. BTAi1] gb|ABQ38916.1| putative pilus assembly protein cpaE [Bradyrhizobium sp. BTAi1] Length = 422 Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/378 (87%), Positives = 358/378 (94%), Gaps = 2/378 (0%) Query: 1 VQSAGEDRRLAKAHLKIQMGGMAAAIEAYRSAPTPNVIILETEGRGDILAGLDQLATVCD 60 VQ+AGEDRRL KAHLK+QMGGMAAAIEAYRSAPTPNVIILET+ R DILAGLDQLATVCD Sbjct: 45 VQAAGEDRRLGKAHLKVQMGGMAAAIEAYRSAPTPNVIILETDARSDILAGLDQLATVCD 104 Query: 61 AGTRVVVIGRVNDVTLYRELVRRGVSDYVIAPAHAIDVVRAVCNLFSAPEAKAVGRIVAV 120 GTRVVVIGRVNDVTLYRELVRRGVSDYV++P IDVVR++CNLFSAPEAKAVGRI+AV Sbjct: 105 PGTRVVVIGRVNDVTLYRELVRRGVSDYVLSPVTPIDVVRSICNLFSAPEAKAVGRIIAV 164 Query: 121 --AKGGVGASTIAHNVAWAIARDLALDSVVADLDLAFGTAGLNYNQDPAQGIADAVFSPD 178 AKGGVGASTIAHNVAWAIARDL++DSVVADLDLAFGTAGL+YNQDPAQGIADAVFSPD Sbjct: 165 VGAKGGVGASTIAHNVAWAIARDLSMDSVVADLDLAFGTAGLDYNQDPAQGIADAVFSPD 224 Query: 179 RVDTAFVDRLLSKCTDHLSLLAAPATLDKVYDFGAEAFDAIFDTLRTTMPCIVLDVPHQW 238 R+D AF+DRLLSKCTDHLSLLAAPATLD+VYDFG EAFDAIFDTLR +MPCIVLDVPHQW Sbjct: 225 RIDIAFMDRLLSKCTDHLSLLAAPATLDRVYDFGVEAFDAIFDTLRASMPCIVLDVPHQW 284 Query: 239 SGWTKRALIAADDILIVAAPDLANLRNAKNMFDLLKASRPNDRAPLYCLNQVGVPKRPEI 298 SGWTKRALI+ADDILIVAAPDLA+LRN KN++DLLKA+RPNDR PLYCLNQVGVPKRPEI Sbjct: 285 SGWTKRALISADDILIVAAPDLASLRNTKNIYDLLKAARPNDRMPLYCLNQVGVPKRPEI 344 Query: 299 AAGEFAKAIESQPIAAIPFDPQIFGSAANNGQMIAEISANHRAVEMFLQMAQRLTGRGET 358 A EFAKAIESQPIA+IPF+PQ+FG+AANNGQMIAE+S NHR EMFLQ+AQRLTGR ET Sbjct: 345 NASEFAKAIESQPIASIPFEPQVFGAAANNGQMIAEMSPNHRTTEMFLQIAQRLTGRSET 404 Query: 359 KKPRGSFLSPLLEKLRSK 376 KKP+GSFLSPLL+KLRSK Sbjct: 405 KKPKGSFLSPLLDKLRSK 422 >ref|NP_768077.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46702.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110] Length = 422 Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/378 (86%), Positives = 358/378 (94%), Gaps = 2/378 (0%) Query: 1 VQSAGEDRRLAKAHLKIQMGGMAAAIEAYRSAPTPNVIILETEGRGDILAGLDQLATVCD 60 VQSAGEDRRL KAHLKIQMGGMAAA+EAYRSAPTPNVI+LE++GR D+L GLDQLATVCD Sbjct: 45 VQSAGEDRRLGKAHLKIQMGGMAAAVEAYRSAPTPNVIVLESDGRNDLLGGLDQLATVCD 104 Query: 61 AGTRVVVIGRVNDVTLYRELVRRGVSDYVIAPAHAIDVVRAVCNLFSAPEAKAVGRIVAV 120 AGTRVVVIGR+NDV LYRELVRRGVSDYV+AP AIDVVR++CNLFSAPEAKAVGRI+AV Sbjct: 105 AGTRVVVIGRINDVMLYRELVRRGVSDYVLAPVGAIDVVRSICNLFSAPEAKAVGRIIAV 164 Query: 121 --AKGGVGASTIAHNVAWAIARDLALDSVVADLDLAFGTAGLNYNQDPAQGIADAVFSPD 178 AKGGVGASTI+HNVAWAIARDLA+D+VVADLDLAFGTAGL+YNQDP QGIADAVFSPD Sbjct: 165 VGAKGGVGASTISHNVAWAIARDLAMDAVVADLDLAFGTAGLDYNQDPPQGIADAVFSPD 224 Query: 179 RVDTAFVDRLLSKCTDHLSLLAAPATLDKVYDFGAEAFDAIFDTLRTTMPCIVLDVPHQW 238 RVDTAF+DRLLSKCTDHLSLLAAPATLD+VYDFG +AFD++FDTLR+TMPCIVLD+PHQW Sbjct: 225 RVDTAFIDRLLSKCTDHLSLLAAPATLDRVYDFGTDAFDSVFDTLRSTMPCIVLDIPHQW 284 Query: 239 SGWTKRALIAADDILIVAAPDLANLRNAKNMFDLLKASRPNDRAPLYCLNQVGVPKRPEI 298 SGWTKRALI ADDILIVAAPDLANLRN KN+FDLLKASRPNDR PLYCLNQVGVPKRPEI Sbjct: 285 SGWTKRALIGADDILIVAAPDLANLRNTKNLFDLLKASRPNDRPPLYCLNQVGVPKRPEI 344 Query: 299 AAGEFAKAIESQPIAAIPFDPQIFGSAANNGQMIAEISANHRAVEMFLQMAQRLTGRGET 358 AA EFAKAIESQP+ +IPF+PQIFGSAANNGQMIAEISANH+++EMFLQ+AQRLTGR ET Sbjct: 345 AATEFAKAIESQPVVSIPFEPQIFGSAANNGQMIAEISANHKSIEMFLQIAQRLTGRSET 404 Query: 359 KKPRGSFLSPLLEKLRSK 376 KK + S LSPL++KLR K Sbjct: 405 KKQKSSLLSPLIDKLRGK 422 >ref|YP_533569.1| putative pilus assembly protein cpaE [Rhodopseudomonas palustris BisB18] gb|ABD89250.1| putative pilus assembly protein cpaE [Rhodopseudomonas palustris BisB18] Length = 423 Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/378 (87%), Positives = 357/378 (94%), Gaps = 2/378 (0%) Query: 1 VQSAGEDRRLAKAHLKIQMGGMAAAIEAYRSAPTPNVIILETEGRGDILAGLDQLATVCD 60 VQ+AGEDRRL KAHLKIQMGGMAAAIEAYRSAPTPNVIILET+ R DILAGLDQLATVCD Sbjct: 46 VQAAGEDRRLDKAHLKIQMGGMAAAIEAYRSAPTPNVIILETDPRSDILAGLDQLATVCD 105 Query: 61 AGTRVVVIGRVNDVTLYRELVRRGVSDYVIAPAHAIDVVRAVCNLFSAPEAKAVGRIVAV 120 AGTRV+VIGRVNDVTLYRELVRRGVSDYVIAP I +V ++C LFSAPEA+AVGRI+AV Sbjct: 106 AGTRVIVIGRVNDVTLYRELVRRGVSDYVIAPVVPIKIVGSICGLFSAPEARAVGRIIAV 165 Query: 121 --AKGGVGASTIAHNVAWAIARDLALDSVVADLDLAFGTAGLNYNQDPAQGIADAVFSPD 178 AKGGVGASTIAHNVAWAIARDLALDSVVADLDLAFGTAGL+YNQDP QGIADAVFSPD Sbjct: 166 VGAKGGVGASTIAHNVAWAIARDLALDSVVADLDLAFGTAGLDYNQDPPQGIADAVFSPD 225 Query: 179 RVDTAFVDRLLSKCTDHLSLLAAPATLDKVYDFGAEAFDAIFDTLRTTMPCIVLDVPHQW 238 RVDTAF+DRLLSKCTDHLSLLAAPATL++VYDFG EAFD+IFDTLRTTMPCIVLDVPHQW Sbjct: 226 RVDTAFIDRLLSKCTDHLSLLAAPATLERVYDFGTEAFDSIFDTLRTTMPCIVLDVPHQW 285 Query: 239 SGWTKRALIAADDILIVAAPDLANLRNAKNMFDLLKASRPNDRAPLYCLNQVGVPKRPEI 298 SGWTKRAL++ADDILIVAAPDLANLRNAKNM+DLLKA+RPNDR P YCLNQVGVPKRPEI Sbjct: 286 SGWTKRALVSADDILIVAAPDLANLRNAKNMYDLLKAARPNDRPPHYCLNQVGVPKRPEI 345 Query: 299 AAGEFAKAIESQPIAAIPFDPQIFGSAANNGQMIAEISANHRAVEMFLQMAQRLTGRGET 358 A EFAKAIES P+ +IPFDPQIFG+AANNGQMIAEISANHRA EMFLQ+AQR+TGRGET Sbjct: 346 NANEFAKAIESPPVVSIPFDPQIFGAAANNGQMIAEISANHRAAEMFLQIAQRMTGRGET 405 Query: 359 KKPRGSFLSPLLEKLRSK 376 KKPRGSF++P LEKLR+K Sbjct: 406 KKPRGSFIAPFLEKLRAK 423 >ref|YP_570646.1| putative pilus assembly protein cpaE [Rhodopseudomonas palustris BisB5] gb|ABE40745.1| putative pilus assembly protein cpaE [Rhodopseudomonas palustris BisB5] Length = 425 Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/378 (86%), Positives = 355/378 (93%), Gaps = 2/378 (0%) Query: 1 VQSAGEDRRLAKAHLKIQMGGMAAAIEAYRSAPTPNVIILETEGRGDILAGLDQLATVCD 60 VQ+AGEDRRL KAHLKIQMGGM AAIEAYRSAPTPNVIILET+ R D+LAGLDQLATVCD Sbjct: 48 VQAAGEDRRLTKAHLKIQMGGMIAAIEAYRSAPTPNVIILETDPRNDVLAGLDQLATVCD 107 Query: 61 AGTRVVVIGRVNDVTLYRELVRRGVSDYVIAPAHAIDVVRAVCNLFSAPEAKAVGRIVAV 120 GTRV+VIG+VNDVTLYRELVRRGVSDY IAP IDVVR++CNLFSAPEAKAVGRI+A+ Sbjct: 108 PGTRVIVIGKVNDVTLYRELVRRGVSDYAIAPVDPIDVVRSICNLFSAPEAKAVGRIIAI 167 Query: 121 --AKGGVGASTIAHNVAWAIARDLALDSVVADLDLAFGTAGLNYNQDPAQGIADAVFSPD 178 AKGGVGASTIAHNVAWAIARDLALDSVVADLDLAFGTAGL+YNQDP QGIA+AVFSPD Sbjct: 168 VGAKGGVGASTIAHNVAWAIARDLALDSVVADLDLAFGTAGLDYNQDPPQGIAEAVFSPD 227 Query: 179 RVDTAFVDRLLSKCTDHLSLLAAPATLDKVYDFGAEAFDAIFDTLRTTMPCIVLDVPHQW 238 RVDTAFVDRLLSKCTDHLSLLAAPATLD+VYDFGA+AFD+IFDTLR TMPCIVLDVPHQW Sbjct: 228 RVDTAFVDRLLSKCTDHLSLLAAPATLDRVYDFGADAFDSIFDTLRATMPCIVLDVPHQW 287 Query: 239 SGWTKRALIAADDILIVAAPDLANLRNAKNMFDLLKASRPNDRAPLYCLNQVGVPKRPEI 298 +GW KRALI ADDILIVAAPDLANLRNAKN++DLLKASRPNDR PLYCLNQVGVPKRPEI Sbjct: 288 TGWAKRALINADDILIVAAPDLANLRNAKNLYDLLKASRPNDRPPLYCLNQVGVPKRPEI 347 Query: 299 AAGEFAKAIESQPIAAIPFDPQIFGSAANNGQMIAEISANHRAVEMFLQMAQRLTGRGET 358 A EFAKAIESQPI +IPFDPQ+FGSAANNGQMIAEI+A+H+ EMFLQ+AQRLTGRGE Sbjct: 348 NASEFAKAIESQPIVSIPFDPQMFGSAANNGQMIAEIAASHKTTEMFLQIAQRLTGRGEA 407 Query: 359 KKPRGSFLSPLLEKLRSK 376 KKP+G FLSP+LEKLR++ Sbjct: 408 KKPKGGFLSPILEKLRAR 425 >ref|YP_001203169.1| putative pilus assembly protein CpaE [Bradyrhizobium sp. ORS 278] emb|CAL74932.1| putative pilus assembly protein cpaE [Bradyrhizobium sp. ORS 278] Length = 422 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/378 (86%), Positives = 355/378 (93%), Gaps = 2/378 (0%) Query: 1 VQSAGEDRRLAKAHLKIQMGGMAAAIEAYRSAPTPNVIILETEGRGDILAGLDQLATVCD 60 VQ+AGEDRRL KAHLKIQMGGMAAAIEAYRSAPTPNVIILET+ R DILAGLD LATVCD Sbjct: 45 VQAAGEDRRLGKAHLKIQMGGMAAAIEAYRSAPTPNVIILETDARSDILAGLDHLATVCD 104 Query: 61 AGTRVVVIGRVNDVTLYRELVRRGVSDYVIAPAHAIDVVRAVCNLFSAPEAKAVGRIVAV 120 GTRVVVIGRVNDVTLYRELVRRGVSDYV++P IDVVR++CNLFSAPEAKAVGRI+AV Sbjct: 105 PGTRVVVIGRVNDVTLYRELVRRGVSDYVLSPVTPIDVVRSICNLFSAPEAKAVGRIIAV 164 Query: 121 --AKGGVGASTIAHNVAWAIARDLALDSVVADLDLAFGTAGLNYNQDPAQGIADAVFSPD 178 AKGGVGASTIAHN+AWAIARDLA+DSVVADLDLAFGTAGL+YNQDPAQGIADAVFSPD Sbjct: 165 VGAKGGVGASTIAHNIAWAIARDLAMDSVVADLDLAFGTAGLDYNQDPAQGIADAVFSPD 224 Query: 179 RVDTAFVDRLLSKCTDHLSLLAAPATLDKVYDFGAEAFDAIFDTLRTTMPCIVLDVPHQW 238 R+D AF+DRLLSKCTDHLSLLAAPATLD+VYDFGAEAFDA+FDTLR +MPCIVLDVPHQW Sbjct: 225 RIDIAFMDRLLSKCTDHLSLLAAPATLDRVYDFGAEAFDAVFDTLRASMPCIVLDVPHQW 284 Query: 239 SGWTKRALIAADDILIVAAPDLANLRNAKNMFDLLKASRPNDRAPLYCLNQVGVPKRPEI 298 SGWTKRALI+ADDILIVAAPDLA+LRN KN++DLLKA+RPNDR PLYCLNQVGVPKRPEI Sbjct: 285 SGWTKRALISADDILIVAAPDLASLRNTKNIYDLLKAARPNDRMPLYCLNQVGVPKRPEI 344 Query: 299 AAGEFAKAIESQPIAAIPFDPQIFGSAANNGQMIAEISANHRAVEMFLQMAQRLTGRGET 358 A EFAKAIES PI IPF+PQIFG+AANNGQMIAE+S NHR EMFLQ+AQRLTGR ET Sbjct: 345 NASEFAKAIESPPIVTIPFEPQIFGAAANNGQMIAEMSPNHRTTEMFLQIAQRLTGRSET 404 Query: 359 KKPRGSFLSPLLEKLRSK 376 KKP+GSFLSPLL+KL++K Sbjct: 405 KKPKGSFLSPLLDKLKAK 422