BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0143.0016.p (260 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_575738.1| type II secretion system protein [Nitrobacter h... 368 e-100 ref|YP_485399.1| type II secretion system protein [Rhodopseudomo... 364 7e-99 ref|YP_782664.1| type II secretion system protein [Rhodopseudomo... 362 3e-98 ref|YP_001203167.1| putative pilus assembly protein membrane pro... 356 2e-96 ref|YP_001242824.1| putative pilus assembly protein [Bradyrhizob... 350 1e-94 >ref|YP_575738.1| type II secretion system protein [Nitrobacter hamburgensis X14] gb|ABE61278.1| type II secretion system protein [Nitrobacter hamburgensis X14] Length = 324 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/264 (70%), Positives = 212/264 (80%), Gaps = 10/264 (3%) Query: 1 MQTQTLALAFLAATTVGGIAWVFLYPYLSGEKKAESRRASGARSEPTTTRNADRTQRSRR 60 M QTLA+AF+AAT VGG+AWVFLYP LSGE KAE RR++ AR+ P R DR QRSRR Sbjct: 1 MNLQTLAMAFMAATAVGGVAWVFLYPALSGEAKAEKRRSAFARTAPAV-RQVDRAQRSRR 59 Query: 61 EQVEGSLKELEARRQKDKKVPLGLRISQAGLEWSEQKFWMISGALGLFGFGAAFLAGGGM 120 EQ+EGSL+E+E R+++D K+ L RI+QAGL WS++KF ++SG G F +G G Sbjct: 60 EQIEGSLREIEQRQKRDSKITLNDRIAQAGLSWSKEKFLIVSGIFGAVCFAVPMFSGAGP 119 Query: 121 LGAAGIGFAMGLGVPRWLLGFLKKRREKAFLKALPDAVDVIVRGIKAGLPLFESLKAVVN 180 + A G+ FA G G+PRWLLGFLK RREKAFL+ALPDAVDVIVRGIKAGLPLFES+K V Sbjct: 120 IAAVGLAFAAGFGLPRWLLGFLKTRREKAFLRALPDAVDVIVRGIKAGLPLFESIKVVAA 179 Query: 181 DAPEPLRSEFLAIIETQAIGMPLGEACARLYER---------GIVIAIQQKSGGNLSEAL 231 D+PEPL+SEF AIIETQAIGMPLGEACARLYER GIVIAIQQKSGGNLSEAL Sbjct: 180 DSPEPLKSEFAAIIETQAIGMPLGEACARLYERMPVPEANFFGIVIAIQQKSGGNLSEAL 239 Query: 232 GNLSRVLRDRKKMAEKIQAMSMEA 255 GNLS+VLRDRKKMAEKIQAMSMEA Sbjct: 240 GNLSKVLRDRKKMAEKIQAMSMEA 263 >ref|YP_485399.1| type II secretion system protein [Rhodopseudomonas palustris HaA2] gb|ABD06488.1| type II secretion system protein [Rhodopseudomonas palustris HaA2] Length = 324 Score = 364 bits (935), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 182/264 (68%), Positives = 212/264 (80%), Gaps = 10/264 (3%) Query: 1 MQTQTLALAFLAATTVGGIAWVFLYPYLSGEKKAESRRASGARSEPTTTRNADRTQRSRR 60 M+ Q+LAL FLAA +VGG+AWVF+YP LSGEK+AE RR S AR+ P R +++QRSRR Sbjct: 1 MEMQSLALGFLAAVSVGGLAWVFIYPLLSGEKQAEQRRTSVARTTPAV-RQIEKSQRSRR 59 Query: 61 EQVEGSLKELEARRQKDKKVPLGLRISQAGLEWSEQKFWMISGALGLFGFGAAFLAGGGM 120 EQVEGSL+E+EAR QK K V LG +++QAGL+W+ KF +S LG F + GGG+ Sbjct: 60 EQVEGSLREIEARSQKQKNVSLGTKLTQAGLDWTPNKFIGVSAGLGTVAFATTMILGGGL 119 Query: 121 LGAAGIGFAMGLGVPRWLLGFLKKRREKAFLKALPDAVDVIVRGIKAGLPLFESLKAVVN 180 L A G+ FA G G+PRW+LGFLKKRREK F+ ALPDAVDVIVRGIKAGLPLF+SLK V Sbjct: 120 LAAVGLAFAAGFGLPRWVLGFLKKRREKKFINALPDAVDVIVRGIKAGLPLFDSLKVVAA 179 Query: 181 DAPEPLRSEFLAIIETQAIGMPLGEACARLYER---------GIVIAIQQKSGGNLSEAL 231 D+PEPL+SEF AIIETQAIGMPLGEACARLY+R GIVI+IQQKSGGNLSEAL Sbjct: 180 DSPEPLKSEFNAIIETQAIGMPLGEACARLYDRMPLPEANFFGIVISIQQKSGGNLSEAL 239 Query: 232 GNLSRVLRDRKKMAEKIQAMSMEA 255 GNLS+VLRDRKKMAEKIQAMSMEA Sbjct: 240 GNLSKVLRDRKKMAEKIQAMSMEA 263 >ref|YP_782664.1| type II secretion system protein [Rhodopseudomonas palustris BisA53] gb|ABJ07684.1| type II secretion system protein [Rhodopseudomonas palustris BisA53] Length = 324 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 183/264 (69%), Positives = 213/264 (80%), Gaps = 10/264 (3%) Query: 1 MQTQTLALAFLAATTVGGIAWVFLYPYLSGEKKAESRRASGARSEPTTTRNADRTQRSRR 60 MQ QTLA+AF+A VGG+AWVFLYP LSGEKKAE RRAS AR EP R D+ QRSRR Sbjct: 1 MQMQTLAIAFMATVAVGGVAWVFLYPLLSGEKKAEQRRASLARPEPVA-RQVDKGQRSRR 59 Query: 61 EQVEGSLKELEARRQKDKKVPLGLRISQAGLEWSEQKFWMISGALGLFGFGAAFLAGGGM 120 EQVE +LKE++ARRQK+KKV + R++QAGL+W+ + F++ S LG F +L+ GG+ Sbjct: 60 EQVELTLKEVDARRQKEKKVAISTRLTQAGLDWAPKNFYIGSAVLGAAVFALVYLSRGGI 119 Query: 121 LGAAGIGFAMGLGVPRWLLGFLKKRREKAFLKALPDAVDVIVRGIKAGLPLFESLKAVVN 180 A G+GFA G G+PRWLL FLKKRRE+ FLKALPDAVDVIVRGIKAGLPL++S+K V Sbjct: 120 TPAVGLGFAAGFGLPRWLLSFLKKRRERNFLKALPDAVDVIVRGIKAGLPLYDSIKVVAA 179 Query: 181 DAPEPLRSEFLAIIETQAIGMPLGEACARLYER---------GIVIAIQQKSGGNLSEAL 231 DAPEPLR+EFL I++TQAIGMPLGEAC RLYER GIVIAIQQKSGGNLSEAL Sbjct: 180 DAPEPLRTEFLTILDTQAIGMPLGEACGRLYERMPLPEANFFGIVIAIQQKSGGNLSEAL 239 Query: 232 GNLSRVLRDRKKMAEKIQAMSMEA 255 GNLS+VLRDRK+MAEKIQAMSMEA Sbjct: 240 GNLSKVLRDRKRMAEKIQAMSMEA 263 >ref|YP_001203167.1| putative pilus assembly protein membrane protein [Bradyrhizobium sp. ORS 278] emb|CAL74930.1| putative pilus assembly protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 324 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 201/264 (76%), Positives = 221/264 (83%), Gaps = 10/264 (3%) Query: 1 MQTQTLALAFLAATTVGGIAWVFLYPYLSGEKKAESRRASGARSEPTTTRNADRTQRSRR 60 M+ Q LALAFLAAT +GGIAWVF+YP LSGE+KAE RR+S A++EP R +R QRSRR Sbjct: 1 MKFQALALAFLAATAIGGIAWVFIYPMLSGERKAEQRRSSVAKAEPVV-RQVERNQRSRR 59 Query: 61 EQVEGSLKELEARRQKDKKVPLGLRISQAGLEWSEQKFWMISGALGLFGFGAAFLAGGGM 120 EQVE SLK+LEA+ QK KVPL +RISQAGL+W+ QKFW+ISG LG AF AGGG Sbjct: 60 EQVESSLKDLEAKAQKQSKVPLNIRISQAGLDWTVQKFWIISGVLGFVVCAVAFFAGGGP 119 Query: 121 LGAAGIGFAMGLGVPRWLLGFLKKRREKAFLKALPDAVDVIVRGIKAGLPLFESLKAVVN 180 LGA G+GFA GLG+PRW+LG+LKKRREK FL ALPDAVDVIVRGIKAGLPLFES+K V Sbjct: 120 LGALGLGFAAGLGLPRWILGYLKKRREKKFLAALPDAVDVIVRGIKAGLPLFESIKVVAA 179 Query: 181 DAPEPLRSEFLAIIETQAIGMPLGEACARLYER---------GIVIAIQQKSGGNLSEAL 231 DAPEPLRSEFLAIIETQAIGMPLGEACARLYER GIVIAIQQKSGGNLSEAL Sbjct: 180 DAPEPLRSEFLAIIETQAIGMPLGEACARLYERMPLPEANFFGIVIAIQQKSGGNLSEAL 239 Query: 232 GNLSRVLRDRKKMAEKIQAMSMEA 255 GNLS+VLRDRKKMAEKIQAMSMEA Sbjct: 240 GNLSKVLRDRKKMAEKIQAMSMEA 263 >ref|YP_001242824.1| putative pilus assembly protein [Bradyrhizobium sp. BTAi1] gb|ABQ38918.1| putative pilus assembly protein [Bradyrhizobium sp. BTAi1] Length = 324 Score = 350 bits (897), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 202/264 (76%), Positives = 219/264 (82%), Gaps = 10/264 (3%) Query: 1 MQTQTLALAFLAATTVGGIAWVFLYPYLSGEKKAESRRASGARSEPTTTRNADRTQRSRR 60 M+ Q LALAFLAAT +GGIAWVFLYP LSGE+KAE RR+S A+SEP R A+R QRSRR Sbjct: 1 MKLQVLALAFLAATAIGGIAWVFLYPMLSGERKAEQRRSSVAKSEPVV-RQAERNQRSRR 59 Query: 61 EQVEGSLKELEARRQKDKKVPLGLRISQAGLEWSEQKFWMISGALGLFGFGAAFLAGGGM 120 EQVE SLK+LEA+ QK KVPL LRISQAGL+W+ QKFW+ISG LG AF GGG Sbjct: 60 EQVESSLKDLEAKAQKQSKVPLNLRISQAGLDWTVQKFWIISGVLGFMAAAIAFFGGGGP 119 Query: 121 LGAAGIGFAMGLGVPRWLLGFLKKRREKAFLKALPDAVDVIVRGIKAGLPLFESLKAVVN 180 LGA G+GFA G G+PRW+L FLKKRREK FL ALPDAVDVIVRGIKAGLPLFES+K V Sbjct: 120 LGALGLGFAAGFGLPRWILNFLKKRREKKFLAALPDAVDVIVRGIKAGLPLFESIKVVAA 179 Query: 181 DAPEPLRSEFLAIIETQAIGMPLGEACARLYER---------GIVIAIQQKSGGNLSEAL 231 DAPEPLRSEFLAIIETQAIGMPLGEACARLYER GIV+AIQQKSGGNLSEAL Sbjct: 180 DAPEPLRSEFLAIIETQAIGMPLGEACARLYERMPLPEANFFGIVVAIQQKSGGNLSEAL 239 Query: 232 GNLSRVLRDRKKMAEKIQAMSMEA 255 GNLS+VLRDRKKMAEKIQAMSMEA Sbjct: 240 GNLSKVLRDRKKMAEKIQAMSMEA 263