BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0143.0014.p (324 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242825.1| putative pilus assembly protein [Bradyrhizob... 535 e-150 ref|YP_001203166.1| putative pilus assembly protein membrane pro... 526 e-147 ref|NP_768074.1| pilus assemble protein [Bradyrhizobium japonicu... 510 e-142 ref|YP_575737.1| type II secretion system protein [Nitrobacter h... 493 e-137 ref|ZP_01044500.1| type II secretion system protein [Nitrobacter... 484 e-134 >ref|YP_001242825.1| putative pilus assembly protein [Bradyrhizobium sp. BTAi1] gb|ABQ38919.1| putative pilus assembly protein [Bradyrhizobium sp. BTAi1] Length = 324 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 254/324 (78%), Positives = 285/324 (87%) Query: 1 MIDFLVAKLHDVRFMTMLLAFFATSATVYTLVMPLLAGGDLNKRMKAVASERERLRQRER 60 M+DFLV KLHD FMTML A A SATVYTL+MPL AG +LNKRMKAVASERER++QRER Sbjct: 1 MVDFLVTKLHDPHFMTMLFAAIAASATVYTLIMPLFAGENLNKRMKAVASERERIKQRER 60 Query: 61 DRLSKSEKVTLRQTPKQAVSKMVDDLNLTKWLAQEAAIEKLVMAGYRGHAPYVYFLAARA 120 +R++ EKV+LRQTPKQ V+K+VDD NLTKWLAQEAA EKL+MAGYRG APY+ FL AR Sbjct: 61 ERMNAGEKVSLRQTPKQLVAKVVDDFNLTKWLAQEAAREKLIMAGYRGQAPYITFLFARL 120 Query: 121 VTPILMLIGAIIYTFFIAGANWSLTLKIGICVGAAYAGLQAPMLFLKNAITKRQLQIKRA 180 VTP+++ +G+++Y F IA SL +KIGIC+G AY GLQAPMLFL NAI+KRQL IKRA Sbjct: 121 VTPVVLFVGSVLYVFVIANLQKSLPIKIGICIGMAYLGLQAPMLFLSNAISKRQLSIKRA 180 Query: 181 FPDSLDLLLICIESGMSVEVAFRKVANEIAGQSVALSEEFALTTAELSYLQDRKTAYENL 240 FPD+LDLLLICIESGMS+E AFRKV+ EIA QS+ALSEEF LTTAELSYLQDRK AYENL Sbjct: 181 FPDALDLLLICIESGMSIEAAFRKVSMEIASQSIALSEEFTLTTAELSYLQDRKVAYENL 240 Query: 241 ARRTGLEGVKSVCMALQQSERYGTPLGQSLRVMAQENRDMRMNEAEKKAAALPPKLTVPM 300 ARRTGLEGVKSVC+ALQQSERYGTPLGQSLRVMAQENRDMRMNEAEKKAAALPPKLTVPM Sbjct: 241 ARRTGLEGVKSVCLALQQSERYGTPLGQSLRVMAQENRDMRMNEAEKKAAALPPKLTVPM 300 Query: 301 ILFFLPCLFIVILGPSYIKIATMH 324 ILFFLP LF+VILGP+ IK+A M Sbjct: 301 ILFFLPVLFVVILGPTGIKVAAMQ 324 >ref|YP_001203166.1| putative pilus assembly protein membrane protein [Bradyrhizobium sp. ORS 278] emb|CAL74929.1| putative pilus assembly protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 324 Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust. Identities = 250/324 (77%), Positives = 282/324 (87%) Query: 1 MIDFLVAKLHDVRFMTMLLAFFATSATVYTLVMPLLAGGDLNKRMKAVASERERLRQRER 60 M+DFLV KLHD FMTM A A SATVYTL+MPL AG +LNKRMKAVASERER++QRER Sbjct: 1 MVDFLVTKLHDPHFMTMFFAAIAASATVYTLIMPLFAGENLNKRMKAVASERERIKQRER 60 Query: 61 DRLSKSEKVTLRQTPKQAVSKMVDDLNLTKWLAQEAAIEKLVMAGYRGHAPYVYFLAARA 120 +RL+ EKV+LRQTPKQ V+K+VDD NLTKWLAQEAA +KL+MAGYRG APY+ FL R Sbjct: 61 ERLNAGEKVSLRQTPKQLVAKVVDDFNLTKWLAQEAARDKLIMAGYRGQAPYITFLFGRL 120 Query: 121 VTPILMLIGAIIYTFFIAGANWSLTLKIGICVGAAYAGLQAPMLFLKNAITKRQLQIKRA 180 VTP+++ G+++Y F IA S+ +KIGICVG AY GLQAPMLFL NAI+KRQL I+RA Sbjct: 121 VTPVVLFAGSVLYVFVIAHLEKSMPVKIGICVGMAYLGLQAPMLFLSNAISKRQLSIRRA 180 Query: 181 FPDSLDLLLICIESGMSVEVAFRKVANEIAGQSVALSEEFALTTAELSYLQDRKTAYENL 240 FPD+LDLLLICIESGMS+E AFR+VA EI+ QS+ALSEEF LTTAELSYLQDRK AYENL Sbjct: 181 FPDALDLLLICIESGMSIEAAFRRVAIEISSQSIALSEEFTLTTAELSYLQDRKVAYENL 240 Query: 241 ARRTGLEGVKSVCMALQQSERYGTPLGQSLRVMAQENRDMRMNEAEKKAAALPPKLTVPM 300 ARRTGLEGVKSVC+ALQQSERYGTPLGQSLRVMAQENRDMRMNEAEKKAAALPPKLTVPM Sbjct: 241 ARRTGLEGVKSVCLALQQSERYGTPLGQSLRVMAQENRDMRMNEAEKKAAALPPKLTVPM 300 Query: 301 ILFFLPCLFIVILGPSYIKIATMH 324 ILFFLP LF+VILGP+ IK+A M Sbjct: 301 ILFFLPVLFVVILGPTGIKVAAMQ 324 >ref|NP_768074.1| pilus assemble protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46699.1| pilus assemble protein [Bradyrhizobium japonicum USDA 110] Length = 324 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 258/324 (79%), Positives = 288/324 (88%) Query: 1 MIDFLVAKLHDVRFMTMLLAFFATSATVYTLVMPLLAGGDLNKRMKAVASERERLRQRER 60 M++FLV+KLHDVRFMTMLLA A SATVYTLVMPL AG L+KRMKAVASERER+RQRER Sbjct: 1 MVEFLVSKLHDVRFMTMLLAAIAASATVYTLVMPLFAGEGLSKRMKAVASERERIRQRER 60 Query: 61 DRLSKSEKVTLRQTPKQAVSKMVDDLNLTKWLAQEAAIEKLVMAGYRGHAPYVYFLAARA 120 +RL+KSEKV+LRQTPKQ VSK+V+D NLTKWLAQEAA +KL+MAGYRG APY+ FL AR Sbjct: 61 ERLNKSEKVSLRQTPKQLVSKVVEDFNLTKWLAQEAARDKLIMAGYRGQAPYITFLFARM 120 Query: 121 VTPILMLIGAIIYTFFIAGANWSLTLKIGICVGAAYAGLQAPMLFLKNAITKRQLQIKRA 180 V PI + +G+++Y F IA + +KIGIC+GAAY GLQAPMLFLKNAI+KRQL IKRA Sbjct: 121 VAPITLFVGSVLYVFLIAHMEKPVPVKIGICIGAAYLGLQAPMLFLKNAISKRQLSIKRA 180 Query: 181 FPDSLDLLLICIESGMSVEVAFRKVANEIAGQSVALSEEFALTTAELSYLQDRKTAYENL 240 FPD+LDLLLICIESGMSVE+AFRKVA EI GQS+ALSEEF LTTAELSYLQDRK AYENL Sbjct: 181 FPDALDLLLICIESGMSVEMAFRKVATEIVGQSIALSEEFTLTTAELSYLQDRKVAYENL 240 Query: 241 ARRTGLEGVKSVCMALQQSERYGTPLGQSLRVMAQENRDMRMNEAEKKAAALPPKLTVPM 300 ARRTGLEGVKSVC+ALQQ+ERYGTPLG SLRVMAQENRDMRM EAEKKAAALPPKLTVPM Sbjct: 241 ARRTGLEGVKSVCLALQQAERYGTPLGHSLRVMAQENRDMRMTEAEKKAAALPPKLTVPM 300 Query: 301 ILFFLPCLFIVILGPSYIKIATMH 324 ILFFLP LF+VILGP+ IKI+ M Sbjct: 301 ILFFLPVLFVVILGPTGIKISEMQ 324 >ref|YP_575737.1| type II secretion system protein [Nitrobacter hamburgensis X14] gb|ABE61277.1| type II secretion system protein [Nitrobacter hamburgensis X14] Length = 325 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 253/325 (77%), Positives = 283/325 (87%), Gaps = 1/325 (0%) Query: 1 MIDFLVAKLHDVRFMTMLLAFFATSATVYTLVMPLLAGGDLNKRMKAVASERERLRQRER 60 M+DFL+ KLHD +FMTM+LA A SATVYTL+ P A L KRMKAVASERER+RQRER Sbjct: 1 MLDFLIEKLHDPQFMTMVLAAIAASATVYTLITPFFAAEGLTKRMKAVASERERIRQRER 60 Query: 61 DRLSKSEKVTLRQTPKQAVSKMVDDLNLTKWLAQEAAIEKLVMAGYRGHAPYVYFLAARA 120 +RL+KSEKV+LRQ PKQ VSK+V+DLNL KW+AQEAA EKLVMAGYRG APYV FL R Sbjct: 61 ERLAKSEKVSLRQAPKQFVSKVVEDLNLGKWVAQEAAREKLVMAGYRGQAPYVTFLFFRM 120 Query: 121 VTPILMLIGAIIYTFFIAGANWSLTLKIGICVGAAYAGLQAPMLFLKNAITKRQLQIKRA 180 VTPI+MLIGAI+Y F ++ S +KIGIC+GAA+ GLQAPMLFLKNAITKRQ+ IKRA Sbjct: 121 VTPIVMLIGAIVYVFLLSHMQQSTPIKIGICIGAAFFGLQAPMLFLKNAITKRQISIKRA 180 Query: 181 FPDSLDLLLICIESGMSVEVAFRKVANEIAGQSVALSEEFALTTAELSYLQDRKTAYENL 240 FPD+LDLLLICIESGMS+EVAFRKV+ EI QSVAL+EEF LTTAELSYLQDRK AYENL Sbjct: 181 FPDALDLLLICIESGMSIEVAFRKVSTEIGSQSVALAEEFTLTTAELSYLQDRKVAYENL 240 Query: 241 ARRTGLEGVKSVCMALQQSERYGTPLGQSLRVMAQENRDMRMNEAEKKAAALPPKLTVPM 300 A+RTG+EGVKSVC+ALQQSERYGTPL QSLRVMAQENRDMRM EAEKKAAALPPKLTVPM Sbjct: 241 AKRTGVEGVKSVCLALQQSERYGTPLAQSLRVMAQENRDMRMTEAEKKAAALPPKLTVPM 300 Query: 301 ILFFLPCLFIVILGPSYIKIAT-MH 324 I+FFLP LF+VILGP+ IKIA MH Sbjct: 301 IVFFLPVLFVVILGPTGIKIAAQMH 325 >ref|ZP_01044500.1| type II secretion system protein [Nitrobacter sp. Nb-311A] gb|EAQ37281.1| type II secretion system protein [Nitrobacter sp. Nb-311A] Length = 325 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 250/325 (76%), Positives = 277/325 (85%), Gaps = 1/325 (0%) Query: 1 MIDFLVAKLHDVRFMTMLLAFFATSATVYTLVMPLLAGGDLNKRMKAVASERERLRQRER 60 M+D L+ K HD +FMTM+LA A SATVYTL+ P A L KRMKAVASERER+RQRER Sbjct: 1 MLDILIEKFHDPQFMTMVLAAIAASATVYTLITPFFAADGLTKRMKAVASERERIRQRER 60 Query: 61 DRLSKSEKVTLRQTPKQAVSKMVDDLNLTKWLAQEAAIEKLVMAGYRGHAPYVYFLAARA 120 +RLSKSEKV+LRQ PKQ VSK+V+DLNL KW+AQEAA EKLVMAGYRG APYV FL R Sbjct: 61 ERLSKSEKVSLRQAPKQFVSKIVEDLNLGKWVAQEAAREKLVMAGYRGQAPYVTFLFFRM 120 Query: 121 VTPILMLIGAIIYTFFIAGANWSLTLKIGICVGAAYAGLQAPMLFLKNAITKRQLQIKRA 180 VTPI+MLIGAI Y F ++ +KIGIC+GA + GLQAPMLFLKNAITKRQL IKRA Sbjct: 121 VTPIVMLIGAIAYVFLLSHTQQPTHVKIGICIGATFFGLQAPMLFLKNAITKRQLSIKRA 180 Query: 181 FPDSLDLLLICIESGMSVEVAFRKVANEIAGQSVALSEEFALTTAELSYLQDRKTAYENL 240 FPD+LDLLLIC+ESGMS+EVAFRKV+ EI QSVAL+EEF LTTAELSYLQDRK AYENL Sbjct: 181 FPDALDLLLICLESGMSIEVAFRKVSTEIGNQSVALAEEFTLTTAELSYLQDRKIAYENL 240 Query: 241 ARRTGLEGVKSVCMALQQSERYGTPLGQSLRVMAQENRDMRMNEAEKKAAALPPKLTVPM 300 A RTG+EGVKSVC+ALQQSERYGTPL QSLRVMAQENRDMRM EAEKKAAALPPKLTVPM Sbjct: 241 ANRTGVEGVKSVCLALQQSERYGTPLAQSLRVMAQENRDMRMTEAEKKAAALPPKLTVPM 300 Query: 301 ILFFLPCLFIVILGPSYIKIAT-MH 324 I+FFLP LF+VILGP+ IKIA MH Sbjct: 301 IVFFLPVLFVVILGPTGIKIAAQMH 325