BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0142.0005.p         (117 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774932.1| hypothetical protein blr8292 [Bradyrhizobium ja...   240   4e-62
ref|YP_578026.1| IS66 Orf2 like [Nitrobacter hamburgensis X14] >...   229   1e-58
ref|YP_001314865.1| IS66 Orf2 family protein [Sinorhizobium medi...   221   3e-56
ref|YP_004557834.1| IS66 Orf2 family protein [Sinorhizobium meli...   218   2e-55
ref|YP_578977.1| IS66 Orf2 like [Nitrobacter hamburgensis X14] >...   218   3e-55

>ref|NP_774932.1| hypothetical protein blr8292 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53557.1| blr8292 [Bradyrhizobium japonicum USDA 110]
          Length = 117

 Score =  240 bits (613), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MFRLGGELQVYLHREPIDFRAGINSLAVLVQETMALDPFALAVFAFCNRRCDRMKLLFFD 60
           MFRLGGELQVYLHREPIDFRAGINSLAVLVQETMALDPFALAVFAFCNRRCDRMKLLFFD
Sbjct: 1   MFRLGGELQVYLHREPIDFRAGINSLAVLVQETMALDPFALAVFAFCNRRCDRMKLLFFD 60

Query: 61  RSGFVLVLKRLTEDKFRWPRRQEAVVTLTTEQLHSILDGIDIDAMVRHPVRQYQVAG 117
           RSGFVLVLKRLTEDKFRWPRRQEAVVTLTTEQLHSILDGIDIDAMVRHPVRQYQVAG
Sbjct: 61  RSGFVLVLKRLTEDKFRWPRRQEAVVTLTTEQLHSILDGIDIDAMVRHPVRQYQVAG 117


>ref|YP_578026.1| IS66 Orf2 like [Nitrobacter hamburgensis X14]
 gb|ABE63566.1| IS66 Orf2 like protein [Nitrobacter hamburgensis X14]
          Length = 149

 Score =  229 bits (583), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 111/116 (95%), Positives = 113/116 (97%)

Query: 2   FRLGGELQVYLHREPIDFRAGINSLAVLVQETMALDPFALAVFAFCNRRCDRMKLLFFDR 61
           FRLG +LQVYLHREPIDFRAGINSLAVLVQETMALDPFA AVFAFCNRRCDRMKLLFFDR
Sbjct: 34  FRLGADLQVYLHREPIDFRAGINSLAVLVQETMALDPFASAVFAFCNRRCDRMKLLFFDR 93

Query: 62  SGFVLVLKRLTEDKFRWPRRQEAVVTLTTEQLHSILDGIDIDAMVRHPVRQYQVAG 117
           SGFVLVLKRL+EDKFRWPRRQEAVVTLTTEQLH ILDGIDIDAMVRHPVRQYQVAG
Sbjct: 94  SGFVLVLKRLSEDKFRWPRRQEAVVTLTTEQLHWILDGIDIDAMVRHPVRQYQVAG 149


>ref|YP_001314865.1| IS66 Orf2 family protein [Sinorhizobium medicae WSM419]
 gb|ABR64932.1| IS66 Orf2 family protein [Sinorhizobium medicae WSM419]
          Length = 117

 Score =  221 bits (563), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 109/117 (93%), Positives = 112/117 (95%)

Query: 1   MFRLGGELQVYLHREPIDFRAGINSLAVLVQETMALDPFALAVFAFCNRRCDRMKLLFFD 60
           MFRLG +L+VYLHREPIDFRAGINSLAVLVQETMALDPFA AVFAFCNRR DRMKLLFFD
Sbjct: 1   MFRLGADLKVYLHREPIDFRAGINSLAVLVQETMALDPFAPAVFAFCNRRRDRMKLLFFD 60

Query: 61  RSGFVLVLKRLTEDKFRWPRRQEAVVTLTTEQLHSILDGIDIDAMVRHPVRQYQVAG 117
           RSGFVLVLKRLTEDKFRWPRR+ AVVTLTTEQLH ILDGIDIDAMVRHPVRQYQVAG
Sbjct: 61  RSGFVLVLKRLTEDKFRWPRREVAVVTLTTEQLHWILDGIDIDAMVRHPVRQYQVAG 117


>ref|YP_004557834.1| IS66 Orf2 family protein [Sinorhizobium meliloti AK83]
 gb|AEG58090.1| IS66 Orf2 family protein [Sinorhizobium meliloti AK83]
          Length = 117

 Score =  218 bits (556), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 107/117 (91%), Positives = 110/117 (94%)

Query: 1   MFRLGGELQVYLHREPIDFRAGINSLAVLVQETMALDPFALAVFAFCNRRCDRMKLLFFD 60
           MF+LG +LQVYLHREPIDFRAGINSLAVLVQETMALDPFA AVFAFCNRR DRMKLLFFD
Sbjct: 1   MFKLGADLQVYLHREPIDFRAGINSLAVLVQETMALDPFAPAVFAFCNRRRDRMKLLFFD 60

Query: 61  RSGFVLVLKRLTEDKFRWPRRQEAVVTLTTEQLHSILDGIDIDAMVRHPVRQYQVAG 117
           RSGFVLVLKRL EDKFRWPRRQE V+ LTTEQLH ILDGIDIDAMVRHPVRQYQVAG
Sbjct: 61  RSGFVLVLKRLAEDKFRWPRRQETVMRLTTEQLHWILDGIDIDAMVRHPVRQYQVAG 117


>ref|YP_578977.1| IS66 Orf2 like [Nitrobacter hamburgensis X14]
 gb|ABE64517.1| IS66 Orf2 like protein [Nitrobacter hamburgensis X14]
          Length = 117

 Score =  218 bits (554), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 107/117 (91%), Positives = 111/117 (94%)

Query: 1   MFRLGGELQVYLHREPIDFRAGINSLAVLVQETMALDPFALAVFAFCNRRCDRMKLLFFD 60
           MFRLG +L+VYLHREPIDFRAGINSLAVLVQETMALDPFA AVFAFCNRR DRMKLLFFD
Sbjct: 1   MFRLGADLKVYLHREPIDFRAGINSLAVLVQETMALDPFAPAVFAFCNRRRDRMKLLFFD 60

Query: 61  RSGFVLVLKRLTEDKFRWPRRQEAVVTLTTEQLHSILDGIDIDAMVRHPVRQYQVAG 117
           RSGFVLVLKRLTEDKFRWPRR+ AVV LTTEQLH ILDGIDIDAMVRHP+RQYQVAG
Sbjct: 61  RSGFVLVLKRLTEDKFRWPRREAAVVRLTTEQLHWILDGIDIDAMVRHPLRQYQVAG 117