BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0140.0048.p (250 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771778.1| hypothetical protein bll5138 [Bradyrhizobium ja... 379 e-103 ref|YP_486017.1| hypothetical protein RPB_2401 [Rhodopseudomonas... 337 7e-91 ref|YP_001240693.1| hypothetical protein BBta_4761 [Bradyrhizobi... 334 8e-90 ref|YP_001206492.1| putative permease [Bradyrhizobium sp. ORS 27... 333 1e-89 ref|YP_533180.1| AzlC-like protein [Rhodopseudomonas palustris B... 331 5e-89 >ref|NP_771778.1| hypothetical protein bll5138 [Bradyrhizobium japonicum USDA 110] dbj|BAC50403.1| bll5138 [Bradyrhizobium japonicum USDA 110] Length = 246 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 189/242 (78%), Positives = 211/242 (87%) Query: 1 VALPPLDSPQWQTSFRAFLWGARSIGATVLTLVLFATYLGIGALAHDSGFSLGWTLASTA 60 +ALPPLDSPQWQ+ RAF WG RSI T+LT+VLF TYLGIGALAHD+ FSL W L ST Sbjct: 1 MALPPLDSPQWQSPCRAFAWGLRSITQTILTIVLFVTYLGIGALAHDTHFSLLWALCSTL 60 Query: 61 FVWAGPAQIIVITTLGSGATVLQSAIAVTVSAIRLFPMVVSVLPLMRTEQTKRRHLILVA 120 FVWAGPAQII+ITTLGSGATV+QSAIAVTVSAIRLFPMVVSVLPLMRT +TKRR L+ A Sbjct: 61 FVWAGPAQIILITTLGSGATVIQSAIAVTVSAIRLFPMVVSVLPLMRTPKTKRRELVFAA 120 Query: 121 HLTAVTLWVECFRFLPQVPRNRRIAFIHGLGCGLVTVCLIANTIGYMLAANLTPLFAAGM 180 HLTAVTLWVEC RFLPQVPR RRIAF+HGLGCGLV+VCL ANT+GY LAANLT A + Sbjct: 121 HLTAVTLWVECHRFLPQVPRERRIAFVHGLGCGLVSVCLTANTVGYFLAANLTQTLGAAI 180 Query: 181 LMLTPLAFLFSTARNCRELADVIALVLGLLLFPLAAMLNSGVDILVSGVVAGTIAYAVHR 240 L+LTPL+FLFSTARN RE+ADV+AL LG+LL+PLAA +NSG+DILVSGVVAG+IAY VH Sbjct: 181 LLLTPLSFLFSTARNSREVADVVALALGILLYPLAAKMNSGLDILVSGVVAGSIAYGVHW 240 Query: 241 AR 242 R Sbjct: 241 WR 242 >ref|YP_486017.1| hypothetical protein RPB_2401 [Rhodopseudomonas palustris HaA2] gb|ABD07106.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 246 Score = 337 bits (865), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 177/242 (73%), Positives = 206/242 (85%) Query: 1 VALPPLDSPQWQTSFRAFLWGARSIGATVLTLVLFATYLGIGALAHDSGFSLGWTLASTA 60 +ALPP DS +WQ+ RAFL G R++ +VL++VLFAT++GIGALAHDSGFSLGW L T Sbjct: 1 MALPPHDSSRWQSPMRAFLLGLRAVATSVLSMVLFATFIGIGALAHDSGFSLGWVLLGTL 60 Query: 61 FVWAGPAQIIVITTLGSGATVLQSAIAVTVSAIRLFPMVVSVLPLMRTEQTKRRHLILVA 120 VWAGPAQII+I+TLGSGATVLQ+AIAVTVSAIRLFPMVVSVLP++RT TK RHL+L A Sbjct: 61 LVWAGPAQIILISTLGSGATVLQAAIAVTVSAIRLFPMVVSVLPMLRTPTTKLRHLVLPA 120 Query: 121 HLTAVTLWVECFRFLPQVPRNRRIAFIHGLGCGLVTVCLIANTIGYMLAANLTPLFAAGM 180 H AVT+WVECFR LPQVPR RRIAF +GLG GL++VCLIAN IGY+LAANL LF A + Sbjct: 121 HFVAVTMWVECFRLLPQVPRERRIAFANGLGTGLISVCLIANLIGYLLAANLPQLFGAAV 180 Query: 181 LMLTPLAFLFSTARNCRELADVIALVLGLLLFPLAAMLNSGVDILVSGVVAGTIAYAVHR 240 L+LTPLAFL STARNCRELAD++AL LGL LFPL AM ++GVD+L+SGV AGTIAY VHR Sbjct: 181 LLLTPLAFLLSTARNCRELADIVALGLGLALFPLVAMFHTGVDVLISGVAAGTIAYGVHR 240 Query: 241 AR 242 R Sbjct: 241 FR 242 >ref|YP_001240693.1| hypothetical protein BBta_4761 [Bradyrhizobium sp. BTAi1] gb|ABQ36787.1| hypothetical protein BBta_4761 [Bradyrhizobium sp. BTAi1] Length = 248 Score = 334 bits (856), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 169/240 (70%), Positives = 204/240 (85%) Query: 3 LPPLDSPQWQTSFRAFLWGARSIGATVLTLVLFATYLGIGALAHDSGFSLGWTLASTAFV 62 LPPLDSPQW S +AF +G R+ AT+L++VLF T++GIGALAHD+ FS+ W + ST V Sbjct: 3 LPPLDSPQWDGSLKAFAFGLRATSATILSVVLFVTFIGIGALAHDTHFSMLWAILSTVLV 62 Query: 63 WAGPAQIIVITTLGSGATVLQSAIAVTVSAIRLFPMVVSVLPLMRTEQTKRRHLILVAHL 122 WAGPAQII+++TLGSG T+LQSAIAVT+SAIRLFPMVV+VLPL+R TKRRHL+L+AHL Sbjct: 63 WAGPAQIILVSTLGSGQTILQSAIAVTMSAIRLFPMVVAVLPLIRGPNTKRRHLVLIAHL 122 Query: 123 TAVTLWVECFRFLPQVPRNRRIAFIHGLGCGLVTVCLIANTIGYMLAANLTPLFAAGMLM 182 TAVTLWVEC+RFLP VPR RRIAF+HGLG GL+ V L+A IGY+LAANL+ F A +L+ Sbjct: 123 TAVTLWVECYRFLPHVPRERRIAFVHGLGSGLMAVALVATIIGYLLAANLSQTFGAAVLL 182 Query: 183 LTPLAFLFSTARNCRELADVIALVLGLLLFPLAAMLNSGVDILVSGVVAGTIAYAVHRAR 242 LTPLAFLFST RN RELADV+AL LGL+L+P+AA LNSGVDIL+SGVVAGTIA+ H+ R Sbjct: 183 LTPLAFLFSTLRNARELADVLALGLGLVLYPVAAQLNSGVDILISGVVAGTIAFGAHKWR 242 >ref|YP_001206492.1| putative permease [Bradyrhizobium sp. ORS 278] emb|CAL78272.1| conserved hypothetical protein; putative permease [Bradyrhizobium sp. ORS 278] Length = 248 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 170/240 (70%), Positives = 204/240 (85%) Query: 3 LPPLDSPQWQTSFRAFLWGARSIGATVLTLVLFATYLGIGALAHDSGFSLGWTLASTAFV 62 PPLDSPQW SFRAF WG R+ AT+L++VLF T++GIGALAHD+ FS+ W + ST V Sbjct: 3 FPPLDSPQWHGSFRAFGWGLRATSATILSVVLFVTFIGIGALAHDTHFSMLWAILSTVLV 62 Query: 63 WAGPAQIIVITTLGSGATVLQSAIAVTVSAIRLFPMVVSVLPLMRTEQTKRRHLILVAHL 122 WAGPAQII+++TLGSG T+LQSAIAVT+SAIRLFPMVV+VLPL+R +T+RR L+L+AH Sbjct: 63 WAGPAQIILVSTLGSGQTILQSAIAVTMSAIRLFPMVVAVLPLIRGPKTRRRQLVLIAHF 122 Query: 123 TAVTLWVECFRFLPQVPRNRRIAFIHGLGCGLVTVCLIANTIGYMLAANLTPLFAAGMLM 182 TAVTLWVEC+RFLP VPR RRIAF+HGLG GL+ V LIA IGY+LAANL+ F A +L+ Sbjct: 123 TAVTLWVECYRFLPHVPRERRIAFVHGLGTGLMGVALIATIIGYLLAANLSQTFGAAVLL 182 Query: 183 LTPLAFLFSTARNCRELADVIALVLGLLLFPLAAMLNSGVDILVSGVVAGTIAYAVHRAR 242 LTPLAFLFST RN RELADV+AL LGL+L+P+AA LNSGVDILVSGV AGT+A+AVH+ R Sbjct: 183 LTPLAFLFSTLRNARELADVLALGLGLVLYPVAARLNSGVDILVSGVAAGTLAFAVHKWR 242 >ref|YP_533180.1| AzlC-like protein [Rhodopseudomonas palustris BisB18] gb|ABD88861.1| AzlC-like [Rhodopseudomonas palustris BisB18] Length = 245 Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 177/242 (73%), Positives = 204/242 (84%) Query: 1 VALPPLDSPQWQTSFRAFLWGARSIGATVLTLVLFATYLGIGALAHDSGFSLGWTLASTA 60 +ALP LDSP+W ++ AF G R++ TVLT VLFATYLGIGALAHD+ FSLGW LAST Sbjct: 1 MALPALDSPKWHSAAGAFRLGLRAVATTVLTAVLFATYLGIGALAHDTHFSLGWVLASTL 60 Query: 61 FVWAGPAQIIVITTLGSGATVLQSAIAVTVSAIRLFPMVVSVLPLMRTEQTKRRHLILVA 120 FVWAGPAQII+I+TLGSGATV Q+AIAVTVSAIRLFPMVV+VLP+MRT T++R LIL A Sbjct: 61 FVWAGPAQIILISTLGSGATVAQAAIAVTVSAIRLFPMVVAVLPMMRTPTTRQRQLILPA 120 Query: 121 HLTAVTLWVECFRFLPQVPRNRRIAFIHGLGCGLVTVCLIANTIGYMLAANLTPLFAAGM 180 H AVTLWVECFR PQVPR RIAF GLGCGLV++CLIAN +G+MLAANL LF A + Sbjct: 121 HFIAVTLWVECFRLFPQVPREARIAFTLGLGCGLVSICLIANVVGFMLAANLPQLFGAAI 180 Query: 181 LMLTPLAFLFSTARNCRELADVIALVLGLLLFPLAAMLNSGVDILVSGVVAGTIAYAVHR 240 L+LTPLAFL STARNCRELAD++AL LGL LFPL ++L++GVDIL+SGV AGTIAY VHR Sbjct: 181 LLLTPLAFLLSTARNCRELADIVALGLGLALFPLVSLLHTGVDILISGVTAGTIAYGVHR 240 Query: 241 AR 242 R Sbjct: 241 WR 242