BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0140.0045.p         (234 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771776.1| hypothetical protein bll5136 [Bradyrhizobium ja...   265   4e-69
ref|YP_577702.1| hypothetical protein Nham_2452 [Nitrobacter ham...   238   5e-61
ref|ZP_08630208.1| hypothetical protein CSIRO_3311 [Bradyrhizobi...   232   3e-59
ref|YP_002543151.1| hypothetical protein Arad_0569 [Agrobacteriu...   230   1e-58
ref|YP_002284154.1| protein of unknown function UPF0066 [Rhizobi...   228   4e-58

>ref|NP_771776.1| hypothetical protein bll5136 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50401.1| virR [Bradyrhizobium japonicum USDA 110]
          Length = 163

 Score =  265 bits (678), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 125/146 (85%), Positives = 135/146 (92%)

Query: 1   MVREMELRQGEVAVDMPTARDAALVFIGRIRTPWTSRLATPRQGRHDGPVCRLEIFEPWV 60
           MVRE ELR+GEVA+++P A DA LVFIGRIRTPWTSRL TPRQGRHDGP+CRLEIFEP+V
Sbjct: 1   MVRENELREGEVAIELPPAEDAGLVFIGRIRTPWTSRLETPRQGRHDGPICRLEIFEPFV 60

Query: 61  AAIKGVDFYSNLEVLYWLHQSRRDIVLQSPKNNGNTRGTFSLRSPVRPNPIGTSIVKLVG 120
            AIKGVDFYSNLEVLYWL +SRRDI+LQSPKNN  TRGTFSLRSPVRPNPIGTSIVKLVG
Sbjct: 61  PAIKGVDFYSNLEVLYWLDKSRRDIILQSPKNNEKTRGTFSLRSPVRPNPIGTSIVKLVG 120

Query: 121 VEGNVILVRGLDCLDETPLIDVKPDR 146
           +EGN ILVRGLDCLD TPLID+KPDR
Sbjct: 121 IEGNAILVRGLDCLDNTPLIDIKPDR 146


>ref|YP_577702.1| hypothetical protein Nham_2452 [Nitrobacter hamburgensis X14]
 gb|ABE63242.1| protein of unknown function UPF0066 [Nitrobacter hamburgensis X14]
          Length = 163

 Score =  238 bits (607), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 108/146 (73%), Positives = 130/146 (89%)

Query: 1   MVREMELRQGEVAVDMPTARDAALVFIGRIRTPWTSRLATPRQGRHDGPVCRLEIFEPWV 60
           MVRE E+R+GEV VD+P   DA LVFIGRIRTPWTSRL TPRQGR DGPVCRLEIF+PW 
Sbjct: 1   MVREYEVREGEVVVDLPPPTDAGLVFIGRIRTPWTSRLKTPRQGREDGPVCRLEIFDPWK 60

Query: 61  AAIKGVDFYSNLEVLYWLHQSRRDIVLQSPKNNGNTRGTFSLRSPVRPNPIGTSIVKLVG 120
            A++G+D Y ++EV+YWLH SRRDIVLQ+PK++G T GTFSLRSPVRPNP+GTS+VKLVG
Sbjct: 61  PALQGLDRYESIEVIYWLHLSRRDIVLQTPKSSGATHGTFSLRSPVRPNPLGTSLVKLVG 120

Query: 121 VEGNVILVRGLDCLDETPLIDVKPDR 146
           +EG+ +LVRG+DCLDETPL+D+KP+R
Sbjct: 121 IEGSTVLVRGMDCLDETPLLDIKPNR 146


>ref|ZP_08630208.1| hypothetical protein CSIRO_3311 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07081.1| hypothetical protein CSIRO_3311 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 163

 Score =  232 bits (592), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 105/146 (71%), Positives = 126/146 (86%)

Query: 1   MVREMELRQGEVAVDMPTARDAALVFIGRIRTPWTSRLATPRQGRHDGPVCRLEIFEPWV 60
           MVR  E+R GEVA++ P   DA LVFIGRI TPWT RL TPRQGRHDGPVC++EIFEPWV
Sbjct: 1   MVRYNEIRDGEVAIEPPPPTDAGLVFIGRIHTPWTDRLKTPRQGRHDGPVCKIEIFEPWV 60

Query: 61  AAIKGVDFYSNLEVLYWLHQSRRDIVLQSPKNNGNTRGTFSLRSPVRPNPIGTSIVKLVG 120
            A+KG+D ++ +EV+YWLHQSRRD++LQSP ++ NT GTFSLRSPVRPNP+GTS+ KLV 
Sbjct: 61  PALKGLDRFTQVEVIYWLHQSRRDLILQSPASDTNTHGTFSLRSPVRPNPLGTSVTKLVS 120

Query: 121 VEGNVILVRGLDCLDETPLIDVKPDR 146
           +EGN++LVRGLDCLD TPLID+KPDR
Sbjct: 121 IEGNMVLVRGLDCLDGTPLIDLKPDR 146


>ref|YP_002543151.1| hypothetical protein Arad_0569 [Agrobacterium radiobacter K84]
 gb|ACM25226.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 176

 Score =  230 bits (587), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/148 (72%), Positives = 125/148 (84%)

Query: 1   MVREMELRQGEVAVDMPTARDAALVFIGRIRTPWTSRLATPRQGRHDGPVCRLEIFEPWV 60
           MVRE E+R+ EVAV+ P A DA LVFIGRI TPWTSR+ TPRQGRHDGP+CR+E+FEPWV
Sbjct: 1   MVRENEIRENEVAVEPPAATDAGLVFIGRISTPWTSRMETPRQGRHDGPLCRIELFEPWV 60

Query: 61  AAIKGVDFYSNLEVLYWLHQSRRDIVLQSPKNNGNTRGTFSLRSPVRPNPIGTSIVKLVG 120
            A+KGV+ +  LE+LYWL +SRRD+VLQSP N+G   GTFSLRSPVRPNPIGTSIVKL  
Sbjct: 61  PALKGVEAFERLEILYWLDRSRRDLVLQSPANSGKVHGTFSLRSPVRPNPIGTSIVKLEA 120

Query: 121 VEGNVILVRGLDCLDETPLIDVKPDRLV 148
           VEG  +LVRGLDCLD TPL+D+KPDR +
Sbjct: 121 VEGATLLVRGLDCLDGTPLLDLKPDRTL 148


>ref|YP_002284154.1| protein of unknown function UPF0066 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gb|ACI59283.1| protein of unknown function UPF0066 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 174

 Score =  228 bits (582), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 109/146 (74%), Positives = 123/146 (84%)

Query: 1   MVREMELRQGEVAVDMPTARDAALVFIGRIRTPWTSRLATPRQGRHDGPVCRLEIFEPWV 60
           MVRE E+R+ EVAV+ P A DA LVFIGRIRTPWTSR+ TPRQGRHDGPVC +EIFEPWV
Sbjct: 1   MVRENEIRKNEVAVEAPAAGDAGLVFIGRIRTPWTSRMETPRQGRHDGPVCTIEIFEPWV 60

Query: 61  AAIKGVDFYSNLEVLYWLHQSRRDIVLQSPKNNGNTRGTFSLRSPVRPNPIGTSIVKLVG 120
           AA++GVD Y  LEVLYWL +SRRD+VLQSP ++G   GTFSLRSPVRPNPIGTSIV L  
Sbjct: 61  AALRGVDKYERLEVLYWLDRSRRDLVLQSPASDGEVHGTFSLRSPVRPNPIGTSIVVLER 120

Query: 121 VEGNVILVRGLDCLDETPLIDVKPDR 146
           VE   +LVRGLDCLD TPL+D+KPDR
Sbjct: 121 VENACLLVRGLDCLDGTPLLDIKPDR 146