BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0140.0025.p         (109 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773409.1| glycogen debranching enzyme [Bradyrhizobium jap...   162   2e-38
ref|YP_001207699.1| glycosyl hydrolase [Bradyrhizobium sp. ORS 2...   155   1e-36
ref|YP_001242148.1| glycosyl hydrolase [Bradyrhizobium sp. BTAi1...   155   2e-36
ref|YP_002290038.1| glycogen debranching enzyme GlgX [Oligotroph...   140   6e-32
ref|YP_533535.1| glycogen debranching protein GlgX [Rhodopseudom...   139   1e-31

>ref|NP_773409.1| glycogen debranching enzyme [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52034.1| glycogen debranching enzyme [Bradyrhizobium japonicum USDA 110]
          Length = 692

 Score =  162 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/106 (67%), Positives = 85/106 (80%)

Query: 3   RPPSXGSYGVLWLTPAAEEMKESDWKFPESRFLAYVLGPMEPGQAPIFIVLNAAPQEIVF 62
           RP    SYG LWLTPA EEM E+DWKFPE RFL+YV+GPMEPG A IFIVLNAAP+EI F
Sbjct: 586 RPKDGLSYGALWLTPAGEEMTENDWKFPEGRFLSYVMGPMEPGGAAIFIVLNAAPEEIAF 645

Query: 63  RMPRMAEYKNWQQVLNTTKAEQTAEQFASGADTTAPPRSVLAFAGS 108
           ++P+M EYK+WQQ+LNTT A+     F  G+D+ APPRSVLAFAG+
Sbjct: 646 KLPKMTEYKSWQQILNTTDAKLNTIDFQPGSDSKAPPRSVLAFAGA 691


>ref|YP_001207699.1| glycosyl hydrolase [Bradyrhizobium sp. ORS 278]
 emb|CAL79482.1| glycosyl hydrolase (glycogen debranching enzyme) [Bradyrhizobium
           sp. ORS 278]
          Length = 691

 Score =  155 bits (393), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 72/102 (70%), Positives = 85/102 (83%)

Query: 6   SXGSYGVLWLTPAAEEMKESDWKFPESRFLAYVLGPMEPGQAPIFIVLNAAPQEIVFRMP 65
           S GS+GVLWLTP+AEEM ++DW FP+ RFLAYVL P+E  QAPIFIVLNAAP+EI F++P
Sbjct: 588 SDGSFGVLWLTPSAEEMTQTDWTFPDGRFLAYVLAPVEQEQAPIFIVLNAAPEEIGFKLP 647

Query: 66  RMAEYKNWQQVLNTTKAEQTAEQFASGADTTAPPRSVLAFAG 107
           ++AE K WQQVLNTT+A+Q    FASG D  APPRSVLAFAG
Sbjct: 648 KLAETKIWQQVLNTTEAQQKPIDFASGTDLKAPPRSVLAFAG 689


>ref|YP_001242148.1| glycosyl hydrolase [Bradyrhizobium sp. BTAi1]
 gb|ABQ38242.1| glycosyl hydrolase (glycogen debranching enzyme) [Bradyrhizobium
           sp. BTAi1]
          Length = 691

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/100 (69%), Positives = 85/100 (85%)

Query: 8   GSYGVLWLTPAAEEMKESDWKFPESRFLAYVLGPMEPGQAPIFIVLNAAPQEIVFRMPRM 67
           GS+GVLWLTP+AEEM ++DW FP+ RFLAYVL P+E  QAPIFIVLNAAP+EI F++P++
Sbjct: 590 GSFGVLWLTPSAEEMTQTDWTFPDGRFLAYVLAPVEQEQAPIFIVLNAAPEEIGFKLPKL 649

Query: 68  AEYKNWQQVLNTTKAEQTAEQFASGADTTAPPRSVLAFAG 107
           AEYK WQQVL+TT+ +Q    FA+GAD  APPRSVLA+AG
Sbjct: 650 AEYKTWQQVLDTTEIQQKPADFAAGADLKAPPRSVLAYAG 689


>ref|YP_002290038.1| glycogen debranching enzyme GlgX [Oligotropha carboxidovorans OM5]
 ref|YP_004631991.1| glycogen operon protein GlgX [Oligotropha carboxidovorans OM5]
 gb|ACI94173.1| glycogen debranching enzyme GlgX [Oligotropha carboxidovorans OM5]
 gb|AEI02174.1| glycogen operon protein GlgX [Oligotropha carboxidovorans OM4]
 gb|AEI05750.1| glycogen operon protein GlgX [Oligotropha carboxidovorans OM5]
          Length = 693

 Score =  140 bits (353), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 63/102 (61%), Positives = 77/102 (75%)

Query: 8   GSYGVLWLTPAAEEMKESDWKFPESRFLAYVLGPMEPGQAPIFIVLNAAPQEIVFRMPRM 67
           GSYGVLWLTP   EM+E+DW FPE RFL+YVLGP E G+AP+FIVLNAAP+ I F +P++
Sbjct: 592 GSYGVLWLTPEGNEMEEADWNFPEGRFLSYVLGPKERGEAPLFIVLNAAPEPITFTLPKL 651

Query: 68  AEYKNWQQVLNTTKAEQTAEQFASGADTTAPPRSVLAFAGSA 109
            EY  W  VL+TT A ++ +  ASG    APPRSVL FAG+A
Sbjct: 652 HEYTKWSCVLDTTTAAESPDNRASGETIEAPPRSVLVFAGAA 693


>ref|YP_533535.1| glycogen debranching protein GlgX [Rhodopseudomonas palustris
           BisB18]
 gb|ABD89216.1| Glycogen debranching enzyme GlgX [Rhodopseudomonas palustris
           BisB18]
          Length = 692

 Score =  139 bits (350), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/102 (60%), Positives = 77/102 (75%)

Query: 8   GSYGVLWLTPAAEEMKESDWKFPESRFLAYVLGPMEPGQAPIFIVLNAAPQEIVFRMPRM 67
           GSYGVLWLTP A+EM + DW FP+ RFLAYVL P EPG AP+FIVLN+AP  I F+ P+ 
Sbjct: 590 GSYGVLWLTPGADEMTQQDWAFPDGRFLAYVLSPAEPGYAPLFIVLNSAPAAITFKFPKT 649

Query: 68  AEYKNWQQVLNTTKAEQTAEQFASGADTTAPPRSVLAFAGSA 109
            E+K W+QVLNTT      + + +G +T APPRSVLAFAG++
Sbjct: 650 PEWKVWRQVLNTTDERAVIDPWPAGGETIAPPRSVLAFAGAS 691