BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0140.0022.p (347 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_783335.1| DNA methylase N-4/N-6 domain-containing protein... 656 0.0 ref|YP_578420.1| DNA methylase N-4/N-6 [Nitrobacter hamburgensis... 654 0.0 ref|YP_319208.1| DNA methylase N-4/N-6 [Nitrobacter winogradskyi... 650 0.0 ref|NP_769149.1| adenine DNA methyltransferase [Bradyrhizobium j... 644 0.0 ref|YP_002289952.1| modification methylase CcrMI [Oligotropha ca... 643 0.0 >ref|YP_783335.1| DNA methylase N-4/N-6 domain-containing protein [Rhodopseudomonas palustris BisA53] gb|ABJ08355.1| DNA adenine methylase CcrM [Rhodopseudomonas palustris BisA53] Length = 379 Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/347 (89%), Positives = 330/347 (95%) Query: 1 VAELSKLQAGSVDLVFADPPYNLQLKGDLKRPDESHVDAVNDDWDKFSSFAAYDDFTRAW 60 VAE+SKL SVDLVFADPPYNLQLKGDLKRPDESHVDAVNDDWDKFSSFAAYDDFTRAW Sbjct: 33 VAEMSKLPKASVDLVFADPPYNLQLKGDLKRPDESHVDAVNDDWDKFSSFAAYDDFTRAW 92 Query: 61 LLACRRVMKPSATLWVIGSYHNIFRVGAIMQDLGFWLLNDIVWRKSNPMPNFRGRRFTNA 120 LL+CRR+MKPSAT+WVIGSYHNIFRVGAIMQDLGFW+LNDIVWRKSNPMPNFRGRRFTNA Sbjct: 93 LLSCRRIMKPSATIWVIGSYHNIFRVGAIMQDLGFWVLNDIVWRKSNPMPNFRGRRFTNA 152 Query: 121 HETMIWAARDEKAKGYTFNYEALKASNEDVQARSDWLIPLCTGEERLKDGDGKKVHPTQK 180 HETMIWAARDE AKGYTFNYEALKA+NEDVQARSDWLIPLCTG+ERLK DGKKVHPTQK Sbjct: 153 HETMIWAARDENAKGYTFNYEALKAANEDVQARSDWLIPLCTGDERLKGADGKKVHPTQK 212 Query: 181 PEQLLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGRSYIGFERDRTYAAAAEARIAAI 240 PE LLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGR YIGFERD+ YA AA ARI AI Sbjct: 213 PEGLLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGRRYIGFERDKDYAKAARARIDAI 272 Query: 241 EPLPDATLAPFMTAREAPRVAFSELIERGMIVPGARLVDAKKRHGALVRADGAIMLGDKV 300 EPLP+ATLAPF+TAR APRVAF+EL+ERGMI+PG +LVD+KKRHGALVRADGAIMLGDKV Sbjct: 273 EPLPEATLAPFVTARSAPRVAFAELVERGMILPGTKLVDSKKRHGALVRADGAIMLGDKV 332 Query: 301 GSIHRIGAVAQGSGACNGWTYWHIETKSGLRLIDELRAEIRSEMAAG 347 GSIHRIGAVAQGS ACNGWT+WH+ETK GL+LIDELRAEIRS MAAG Sbjct: 333 GSIHRIGAVAQGSEACNGWTFWHVETKKGLKLIDELRAEIRSGMAAG 379 >ref|YP_578420.1| DNA methylase N-4/N-6 [Nitrobacter hamburgensis X14] gb|ABE63960.1| DNA methylase N-4/N-6 [Nitrobacter hamburgensis X14] Length = 376 Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/347 (92%), Positives = 336/347 (96%) Query: 1 VAELSKLQAGSVDLVFADPPYNLQLKGDLKRPDESHVDAVNDDWDKFSSFAAYDDFTRAW 60 VA +SKL +GS DLVFADPPYNLQLKGDLKRPDESHVDAVNDDWDKFSSFAAYDDFTRAW Sbjct: 30 VAAMSKLPSGSADLVFADPPYNLQLKGDLKRPDESHVDAVNDDWDKFSSFAAYDDFTRAW 89 Query: 61 LLACRRVMKPSATLWVIGSYHNIFRVGAIMQDLGFWLLNDIVWRKSNPMPNFRGRRFTNA 120 LLACRRVMKP+AT+WVIGSYHNIFRVGAIMQDLGFW+LNDIVWRK+NPMPNFRGRRFTNA Sbjct: 90 LLACRRVMKPTATIWVIGSYHNIFRVGAIMQDLGFWVLNDIVWRKTNPMPNFRGRRFTNA 149 Query: 121 HETMIWAARDEKAKGYTFNYEALKASNEDVQARSDWLIPLCTGEERLKDGDGKKVHPTQK 180 HETMIWAARDE AKGYTFNYEALKASNEDVQARSDWLIPLCTG ERLKD DG+KVHPTQK Sbjct: 150 HETMIWAARDENAKGYTFNYEALKASNEDVQARSDWLIPLCTGNERLKDKDGRKVHPTQK 209 Query: 181 PEQLLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGRSYIGFERDRTYAAAAEARIAAI 240 PE LLARVLLSSS+PGDL+IDPFNGTGTTGAVAKRLGR+YIGFERD+TYAAAAE RIAAI Sbjct: 210 PEGLLARVLLSSSRPGDLIIDPFNGTGTTGAVAKRLGRNYIGFERDQTYAAAAEKRIAAI 269 Query: 241 EPLPDATLAPFMTAREAPRVAFSELIERGMIVPGARLVDAKKRHGALVRADGAIMLGDKV 300 EPLP+AT+APFMTAREAPRVAFSELIERGMI PGA+LVDAKKRHGALVRADGAIMLGDKV Sbjct: 270 EPLPEATIAPFMTAREAPRVAFSELIERGMISPGAKLVDAKKRHGALVRADGAIMLGDKV 329 Query: 301 GSIHRIGAVAQGSGACNGWTYWHIETKSGLRLIDELRAEIRSEMAAG 347 GSIHRIGAVAQG+GACNGWT+WHIET GLRLIDELRAEIRSEMAAG Sbjct: 330 GSIHRIGAVAQGAGACNGWTFWHIETSKGLRLIDELRAEIRSEMAAG 376 >ref|YP_319208.1| DNA methylase N-4/N-6 [Nitrobacter winogradskyi Nb-255] gb|ABA05856.1| DNA adenine methylase CcrM [Nitrobacter winogradskyi Nb-255] Length = 376 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/346 (91%), Positives = 335/346 (96%) Query: 1 VAELSKLQAGSVDLVFADPPYNLQLKGDLKRPDESHVDAVNDDWDKFSSFAAYDDFTRAW 60 VA +SKLQAGS DL+FADPPYNLQLKGDLKRPDESHVDAVN DWDKFSSF+AYD+FTRAW Sbjct: 30 VAGMSKLQAGSADLIFADPPYNLQLKGDLKRPDESHVDAVNSDWDKFSSFSAYDEFTRAW 89 Query: 61 LLACRRVMKPSATLWVIGSYHNIFRVGAIMQDLGFWLLNDIVWRKSNPMPNFRGRRFTNA 120 LLACRRVMKPSAT+WVIGSYHNIFRVGAIMQDLGFW+LNDIVWRK+NPMPNFRGRRFTNA Sbjct: 90 LLACRRVMKPSATIWVIGSYHNIFRVGAIMQDLGFWVLNDIVWRKTNPMPNFRGRRFTNA 149 Query: 121 HETMIWAARDEKAKGYTFNYEALKASNEDVQARSDWLIPLCTGEERLKDGDGKKVHPTQK 180 HETMIWAARDE AKGYTFNYEALKA+NEDVQARSDWLIPLCTG ERLKD DG+KVHPTQK Sbjct: 150 HETMIWAARDENAKGYTFNYEALKAANEDVQARSDWLIPLCTGNERLKDEDGRKVHPTQK 209 Query: 181 PEQLLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGRSYIGFERDRTYAAAAEARIAAI 240 PE LLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGR+YIGFERDRTYAAAAE RIAA+ Sbjct: 210 PEGLLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGRNYIGFERDRTYAAAAEKRIAAV 269 Query: 241 EPLPDATLAPFMTAREAPRVAFSELIERGMIVPGARLVDAKKRHGALVRADGAIMLGDKV 300 EPLP+ATLAPFMTAREAPRVAFSELIERGMI PGA+LVDAKKRHGALVRADGAIMLGDKV Sbjct: 270 EPLPEATLAPFMTAREAPRVAFSELIERGMISPGAKLVDAKKRHGALVRADGAIMLGDKV 329 Query: 301 GSIHRIGAVAQGSGACNGWTYWHIETKSGLRLIDELRAEIRSEMAA 346 GSIHRIGAVAQG+GACNGWT+WHIET GL+LIDELRAEIRS+MA+ Sbjct: 330 GSIHRIGAVAQGAGACNGWTFWHIETSKGLKLIDELRAEIRSQMAS 375 >ref|NP_769149.1| adenine DNA methyltransferase [Bradyrhizobium japonicum USDA 110] dbj|BAC47774.1| adenine DNA methyltransferase [Bradyrhizobium japonicum USDA 110] Length = 376 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/346 (91%), Positives = 332/346 (95%) Query: 1 VAELSKLQAGSVDLVFADPPYNLQLKGDLKRPDESHVDAVNDDWDKFSSFAAYDDFTRAW 60 VAE+SKLQAGSVDLVFADPPYNLQLKGDLKRPDESHVDAVNDDWDKF SF+AYDDFTRAW Sbjct: 30 VAEMSKLQAGSVDLVFADPPYNLQLKGDLKRPDESHVDAVNDDWDKFDSFSAYDDFTRAW 89 Query: 61 LLACRRVMKPSATLWVIGSYHNIFRVGAIMQDLGFWLLNDIVWRKSNPMPNFRGRRFTNA 120 LLA RR MKPSAT+WVIGSYHNIFRVGAIMQDLGFWLLNDIVWRK+NPMPNFRGRRFTNA Sbjct: 90 LLAARRAMKPSATIWVIGSYHNIFRVGAIMQDLGFWLLNDIVWRKTNPMPNFRGRRFTNA 149 Query: 121 HETMIWAARDEKAKGYTFNYEALKASNEDVQARSDWLIPLCTGEERLKDGDGKKVHPTQK 180 HETMIWAARDEKAKGYTFNYEALKA+NEDVQARSDWLIPLCTGEERLK DGKKVHPTQK Sbjct: 150 HETMIWAARDEKAKGYTFNYEALKAANEDVQARSDWLIPLCTGEERLKGADGKKVHPTQK 209 Query: 181 PEQLLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGRSYIGFERDRTYAAAAEARIAAI 240 PE LLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGRSYIGFERD+TYA AAEARIAA+ Sbjct: 210 PEGLLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGRSYIGFERDKTYAKAAEARIAAV 269 Query: 241 EPLPDATLAPFMTAREAPRVAFSELIERGMIVPGARLVDAKKRHGALVRADGAIMLGDKV 300 EPLP+A+LAPFMTAREAPRVAFSELIERGMI+PG +L DAKK+ GALVRADGAIM GDKV Sbjct: 270 EPLPEASLAPFMTAREAPRVAFSELIERGMIMPGTKLFDAKKKLGALVRADGAIMFGDKV 329 Query: 301 GSIHRIGAVAQGSGACNGWTYWHIETKSGLRLIDELRAEIRSEMAA 346 GSIHRIGAVAQG+ ACNGWT+WH+ETK GL+LIDELRAEIRS MAA Sbjct: 330 GSIHRIGAVAQGAQACNGWTFWHVETKKGLKLIDELRAEIRSGMAA 375 >ref|YP_002289952.1| modification methylase CcrMI [Oligotropha carboxidovorans OM5] gb|ACI94087.1| modification methylase CcrMI [Oligotropha carboxidovorans OM5] Length = 374 Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust. Identities = 304/343 (88%), Positives = 326/343 (95%), Gaps = 1/343 (0%) Query: 1 VAELSKLQAGSVDLVFADPPYNLQLKGDLKRPDESHVDAVNDDWDKFSSFAAYDDFTRAW 60 VAE++KL A SVDLVFADPPYNLQLKG+LKRPDESHVDAVNDDWDKFSSFAAYDDFTRAW Sbjct: 29 VAEMTKLPANSVDLVFADPPYNLQLKGELKRPDESHVDAVNDDWDKFSSFAAYDDFTRAW 88 Query: 61 LLACRRVMKPSATLWVIGSYHNIFRVGAIMQDLGFWLLNDIVWRKSNPMPNFRGRRFTNA 120 LLACRR+MKP+AT+WVIGSYHNIFRVGAIMQDLGFW+LNDIVWRKSNPMPNFRGRRFTNA Sbjct: 89 LLACRRIMKPTATIWVIGSYHNIFRVGAIMQDLGFWILNDIVWRKSNPMPNFRGRRFTNA 148 Query: 121 HETMIWAARDEKAKGYTFNYEALKASNEDVQARSDWLIPLCTGEERLKDGDGKKVHPTQK 180 HETMIWAARDE K YTFNY+ALKA+NEDVQARSDWLIPLCTGEERLK DG+K+HPTQK Sbjct: 149 HETMIWAARDEATK-YTFNYDALKAANEDVQARSDWLIPLCTGEERLKGKDGRKIHPTQK 207 Query: 181 PEQLLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGRSYIGFERDRTYAAAAEARIAAI 240 PE LLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGRSYIGFERDRTYA AAE RIAA+ Sbjct: 208 PEGLLARVLLSSSKPGDLVIDPFNGTGTTGAVAKRLGRSYIGFERDRTYAEAAEKRIAAV 267 Query: 241 EPLPDATLAPFMTAREAPRVAFSELIERGMIVPGARLVDAKKRHGALVRADGAIMLGDKV 300 EPLP ATLAPFMTAREAPRV F+ELIERGMI PGA+LVD+KK+H ALVRADGAIMLGDKV Sbjct: 268 EPLPQATLAPFMTAREAPRVPFAELIERGMISPGAKLVDSKKKHAALVRADGAIMLGDKV 327 Query: 301 GSIHRIGAVAQGSGACNGWTYWHIETKSGLRLIDELRAEIRSE 343 GSIHR+GA+AQGS ACNGW++WH+ETK GLRLIDELRAE+R E Sbjct: 328 GSIHRMGALAQGSEACNGWSFWHVETKKGLRLIDELRAEVRRE 370