BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0139.0009.p         (104 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002977142.1| short-chain dehydrogenase/reductase SDR [Rhi...   108   2e-22
ref|YP_002545423.1| short-chain oxidoreductase protein [Agrobact...   102   2e-20
ref|ZP_02888755.1| short-chain dehydrogenase/reductase SDR [Burk...   102   3e-20
ref|YP_774419.1| short-chain dehydrogenase/reductase SDR [Burkho...   102   3e-20
ref|YP_769357.1| short-chain dehydrogenase/reductase [Rhizobium ...   101   3e-20

>ref|YP_002977142.1| short-chain dehydrogenase/reductase SDR [Rhizobium leguminosarum
          bv. trifolii WSM1325]
 gb|ACS57603.1| short-chain dehydrogenase/reductase SDR [Rhizobium leguminosarum
          bv. trifolii WSM1325]
          Length = 300

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/76 (73%), Positives = 63/76 (82%)

Query: 2  KQVIVITGASSGFGRLTANALARAGHTVYASMRHTTGRNAAAVADIEEFARDNTVDLRAL 61
          KQVIVITGASSGFG LTA ALA+AGHTVYA MR T GRNA AVAD+ EFAR+N VDLR++
Sbjct: 3  KQVIVITGASSGFGALTARALAKAGHTVYAGMRGTEGRNAPAVADVAEFARNNNVDLRSV 62

Query: 62 EFDVGSQASVDAAIAQ 77
          E DV S ASV + IA+
Sbjct: 63 ELDVASDASVVSGIAR 78


>ref|YP_002545423.1| short-chain oxidoreductase protein [Agrobacterium radiobacter
          K84]
 gb|ACM27493.1| short-chain oxidoreductase protein [Agrobacterium radiobacter
          K84]
          Length = 300

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/76 (68%), Positives = 60/76 (78%)

Query: 2  KQVIVITGASSGFGRLTANALARAGHTVYASMRHTTGRNAAAVADIEEFARDNTVDLRAL 61
          KQVIVITGASSGFG LTA ALA+ GHTVYA MR T GRNA  VA+   FA++N VDL+A+
Sbjct: 3  KQVIVITGASSGFGALTARALAKTGHTVYAGMRQTEGRNAPQVAEAAAFAKENGVDLKAV 62

Query: 62 EFDVGSQASVDAAIAQ 77
          E DV S ASV+A IA+
Sbjct: 63 ELDVASDASVEAGIAK 78


>ref|ZP_02888755.1| short-chain dehydrogenase/reductase SDR [Burkholderia ambifaria
          IOP40-10]
 gb|EDT05655.1| short-chain dehydrogenase/reductase SDR [Burkholderia ambifaria
          IOP40-10]
          Length = 299

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/75 (69%), Positives = 61/75 (81%)

Query: 1  MKQVIVITGASSGFGRLTANALARAGHTVYASMRHTTGRNAAAVADIEEFARDNTVDLRA 60
          MK+VI++TGASSGFG LTA ALARAGHTVYASMR + GRNA  VA I ++AR++ VDLR 
Sbjct: 1  MKEVILVTGASSGFGLLTAQALARAGHTVYASMRESAGRNAPRVAAIADYAREHGVDLRT 60

Query: 61 LEFDVGSQASVDAAI 75
          +E DVG  ASV AAI
Sbjct: 61 VELDVGDDASVAAAI 75


>ref|YP_774419.1| short-chain dehydrogenase/reductase SDR [Burkholderia ambifaria
          AMMD]
 gb|ABI88085.1| short-chain dehydrogenase/reductase SDR [Burkholderia ambifaria
          AMMD]
          Length = 299

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/75 (69%), Positives = 61/75 (81%)

Query: 1  MKQVIVITGASSGFGRLTANALARAGHTVYASMRHTTGRNAAAVADIEEFARDNTVDLRA 60
          MK+VI++TGASSGFG LTA ALARAGHTVYASMR + GRNA  VA I ++AR++ VDLR 
Sbjct: 1  MKEVILVTGASSGFGLLTAQALARAGHTVYASMRESAGRNAPRVAAIADYAREHGVDLRT 60

Query: 61 LEFDVGSQASVDAAI 75
          +E DVG  ASV AAI
Sbjct: 61 VELDVGDDASVAAAI 75


>ref|YP_769357.1| short-chain dehydrogenase/reductase [Rhizobium leguminosarum bv.
          viciae 3841]
 emb|CAK09268.1| putative short-chain dehydrogenase/reductase [Rhizobium
          leguminosarum bv. viciae 3841]
          Length = 300

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/76 (71%), Positives = 60/76 (78%)

Query: 2  KQVIVITGASSGFGRLTANALARAGHTVYASMRHTTGRNAAAVADIEEFARDNTVDLRAL 61
          KQVIVITGASSGFG LTA ALA+AGHTVYA MR T  RNA AVAD  EFA+ N VDLR++
Sbjct: 3  KQVIVITGASSGFGALTARALAKAGHTVYAGMRATESRNAPAVADAAEFAKGNNVDLRSV 62

Query: 62 EFDVGSQASVDAAIAQ 77
          E DV S ASV + IA+
Sbjct: 63 ELDVASDASVVSGIAR 78