BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0138.0014.p (176 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003755125.1| hypothetical protein Hden_0990 [Hyphomicrobi... 167 5e-40 ref|YP_004676237.1| hypothetical protein HYPMC_2452 [Hyphomicrob... 167 5e-40 ref|YP_004010840.1| hypothetical protein Rvan_0459 [Rhodomicrobi... 142 3e-32 ref|ZP_05115949.1| hypothetical protein SADFL11_3837 [Labrenzia ... 80 1e-13 ref|ZP_01546669.1| hypothetical protein SIAM614_06958 [Stappia a... 59 3e-07 >ref|YP_003755125.1| hypothetical protein Hden_0990 [Hyphomicrobium denitrificans ATCC 51888] gb|ADJ22804.1| hypothetical protein Hden_0990 [Hyphomicrobium denitrificans ATCC 51888] Length = 178 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 84/164 (51%), Positives = 108/164 (65%) Query: 12 GYSVAYGREDIYFPVYVTAALAGVFLTASWITGAIYWLAPAAAAAGFTYYNIPLLEAGRP 71 GYSVAY RE++ FPVYV A +A TA + + +A + A G+ Y+N PLLE GRP Sbjct: 14 GYSVAYEREELQFPVYVVAVIAAGLATAGVVLDNLPLIALSLIAFGYAYHNYPLLETGRP 73 Query: 72 TIGANQYGIFIQAFGLIRWRAIARIDLVEIAERAMTVHELQIALDGPLGSALVADWRKRP 131 IGA+QYGIF G+I WR+I ++++V R HEL I L P+G AL+ADWRKRP Sbjct: 74 RIGASQYGIFADGLGVISWRSIKQMEMVWTEIRGSGSHELLITLQEPIGRALLADWRKRP 133 Query: 132 AYRLLMRLPWRMDHRGVVRVNLEPFDRAPDEIHRTFLRMWRYYR 175 +R LMRLPW M + VVR+ L FD+ D+IHRTF RM +YR Sbjct: 134 LHRFLMRLPWTMAAKDVVRIPLGVFDQPADDIHRTFTRMMSFYR 177 >ref|YP_004676237.1| hypothetical protein HYPMC_2452 [Hyphomicrobium sp. MC1] emb|CCB65669.1| conserved protein of unknown function [Hyphomicrobium sp. MC1] Length = 178 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 84/171 (49%), Positives = 107/171 (62%) Query: 5 LDEGNVGGYSVAYGREDIYFPVYVTAALAGVFLTASWITGAIYWLAPAAAAAGFTYYNIP 64 + + ++ GY+VAY RE+I FPVYV + V T + A A G+ YYN P Sbjct: 7 VSQEDMHGYTVAYEREEIQFPVYVVGLIGAVLATLGIVHHNSILFALALITLGYAYYNFP 66 Query: 65 LLEAGRPTIGANQYGIFIQAFGLIRWRAIARIDLVEIAERAMTVHELQIALDGPLGSALV 124 LLE GRP IGA+QYGIF + G+I WR+I ++DLV + R V+EL I L+ PL AL+ Sbjct: 67 LLETGRPRIGASQYGIFAEGLGIIAWRSIKQLDLVSLNLRGAEVNELHIILEEPLNRALL 126 Query: 125 ADWRKRPAYRLLMRLPWRMDHRGVVRVNLEPFDRAPDEIHRTFLRMWRYYR 175 ADWRKRP YR LMRLPW M +R+ LE FDR DEI R F RM ++R Sbjct: 127 ADWRKRPYYRFLMRLPWAMPAPNHIRIPLEVFDRPADEIMRNFTRMMGFFR 177 >ref|YP_004010840.1| hypothetical protein Rvan_0459 [Rhodomicrobium vannielii ATCC 17100] gb|ADP69741.1| hypothetical protein Rvan_0459 [Rhodomicrobium vannielii ATCC 17100] Length = 175 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 72/165 (43%), Positives = 102/165 (61%), Gaps = 4/165 (2%) Query: 12 GYSVAYGREDIYFPVYVTAALAGVFLTASWITGAIYWLAPAAAAAGFT-YYNIPLLEAGR 70 G+ + Y R ++ P + A A+W+T L+ A AG + YY P E+ R Sbjct: 14 GFILPYSRTEV--PRFHVLAFISAATFAAWLTWGYELLSITAILAGCSAYYFFPFTES-R 70 Query: 71 PTIGANQYGIFIQAFGLIRWRAIARIDLVEIAERAMTVHELQIALDGPLGSALVADWRKR 130 P +GANQYG+FI GLI WR+I + V + R + + EL I L PLG AL+ADWR+ Sbjct: 71 PRLGANQYGLFIDGLGLIAWRSIGELTFVSFSVRTLDMEELHIKLREPLGRALIADWRRL 130 Query: 131 PAYRLLMRLPWRMDHRGVVRVNLEPFDRAPDEIHRTFLRMWRYYR 175 P +RLLMRLPW+M H G++R+NL+PF+ +EI +T RMW++YR Sbjct: 131 PIWRLLMRLPWKMGHDGIIRINLQPFEPPGEEIAKTMERMWKFYR 175 >ref|ZP_05115949.1| hypothetical protein SADFL11_3837 [Labrenzia alexandrii DFL-11] gb|EEE46548.1| hypothetical protein SADFL11_3837 [Labrenzia alexandrii DFL-11] Length = 186 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 6/165 (3%) Query: 13 YSVAYGREDIYFPVYVTAALAGVFLTASWITGAIYWLAPAAAAAGFTYYNIPLLEAGRPT 72 +++ Y R + VY LAG+F S ++G L A A Y++ P+LE RP Sbjct: 23 FTIGYDRRNSEAIVYGCMLLAGLFAVVSVVSGMYLLLFAALGPAVIAYWHFPMLEKKRPQ 82 Query: 73 IGANQYGIFIQAFGLIRWRAIARIDLVEIAERAMTVHELQIALDGPLGSALVADWRKRPA 132 +GAN+ G+F+ G I W AI IDL + R++ + +L + L PL A V + P Sbjct: 83 LGANEDGLFVDRIGFIDWGAIRMIDLTRTSVRSIELIKLNVLLTRPLEDA-VTQGQHTPL 141 Query: 133 YRLLMRLPWRMDH----RGVVRVNLEPFDRAPDEIHRTFLRMWRY 173 ++ L W+ R ++ VNL PDE+ T +R +++ Sbjct: 142 WKRLTMRNWKRSKREHGRELISVNLHTLVGDPDEV-LTRIRTFKF 185 >ref|ZP_01546669.1| hypothetical protein SIAM614_06958 [Stappia aggregata IAM 12614] gb|EAV44598.1| hypothetical protein SIAM614_06958 [Stappia aggregata IAM 12614] Length = 184 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 5/155 (3%) Query: 13 YSVAYGREDIYFPVYVTAALAGVFLTASWITGAIYWLAPAAAAAGFTYYNIPLLEAGRPT 72 ++V + R VY + L +F + G + A G Y++ P++E G+P Sbjct: 21 FTVGFNRSQSESLVYGSLILGILFAVIGAVGGLPLLALASLAPFGIAYWHYPMIEKGKPQ 80 Query: 73 IGANQYGIFIQAFGLIRWRAIARIDLVEIAERAMTVHELQIALDGPLGSALVADWRKRPA 132 +GAN+ G++++ G I W AI D+ + R + + L + L L A V + P Sbjct: 81 LGANEEGLYVERIGFIDWAAIRMTDVKRTSVRNIELVRLDVLLTRSLDDA-VTKAQTFPV 139 Query: 133 YRLLMRLPW----RMDHRGVVRVNLEPFDRAPDEI 163 ++ M W R R ++ +NL P+EI Sbjct: 140 WKKFMMRNWKRTPREHGRELLAINLHTLAADPEEI 174