BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0138.0009.p (200 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771762.1| transcriptional regulator [Bradyrhizobium japon... 303 1e-80 ref|YP_324537.1| TetR family transcriptional regulator [Anabaena... 129 4e-28 ref|YP_002541385.1| transcriptional regulator protein [Agrobacte... 127 7e-28 ref|ZP_08425893.1| transcriptional regulator, TetR family [Lyngb... 127 1e-27 ref|NP_478170.1| transcriptional regulator [Nostoc sp. PCC 7120]... 124 1e-26 >ref|NP_771762.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC50387.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 208 Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 160/189 (84%), Positives = 172/189 (91%), Gaps = 2/189 (1%) Query: 1 MASPPPKQTMKERILETADRLFYLQGIRAIGVDTIAAEIGISKRTLYNHFPSKDALIEAY 60 MA P QTMKERILETAD+LFYLQGIRAIGVDTIAAEIGISKRTLYNHFPSKDALI AY Sbjct: 16 MAPPTTPQTMKERILETADKLFYLQGIRAIGVDTIAAEIGISKRTLYNHFPSKDALIAAY 75 Query: 61 LQRRFVQPRPSDKPPAEQILATFDSLERRFSAKDFRGCPFVNAVAELGPEDEDRTVRNIA 120 L+RRFV PRPSDKPPAEQILATFDSLERRF+AKDFRGCPFVNAVAELGP +DR VR IA Sbjct: 76 LERRFVAPRPSDKPPAEQILATFDSLERRFAAKDFRGCPFVNAVAELGP--KDRAVRKIA 133 Query: 121 IAFKESRRLWFRNLLRQLGVADAEGLATQLTLLVDGSIAQDLVRDDPAMARAAREAARVL 180 +AFKESRR+WFR L +LGVA+A+ LATQL LLVDGSIAQDLVRDDPAMARAA+EAA+VL Sbjct: 134 VAFKESRRVWFRERLNELGVANADALATQLVLLVDGSIAQDLVRDDPAMARAAKEAAKVL 193 Query: 181 LANAGIKVG 189 L NAG+ VG Sbjct: 194 LRNAGVDVG 202 >ref|YP_324537.1| TetR family transcriptional regulator [Anabaena variabilis ATCC 29413] gb|ABA23642.1| transcriptional regulator, TetR family [Anabaena variabilis ATCC 29413] Length = 200 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 10/194 (5%) Query: 7 KQTMKERILETADRLFYLQGIRAIGVDTIAAEIGISKRTLYNHFPSKDALIEAYLQR--- 63 ++++ +RIL+TA LFY +GIR +G+D I AE G++K +LYNHF SKDALIEA+L++ Sbjct: 8 RKSVYDRILQTASDLFYREGIRNVGIDRIIAESGVAKMSLYNHFKSKDALIEAWLRQEDE 67 Query: 64 ---RFVQPRPSDKP--PAEQILATFDSLERRFSAKDFRGCPFVNAVAELGPEDEDRTVRN 118 R+++ + PA+Q+LA FD+L F + DFRGC F+NA EL + D Sbjct: 68 KWCRWLKTTVEQQTSEPAKQLLAIFDALREWFESPDFRGCAFINASVELA--NPDHPGYR 125 Query: 119 IAIAFKESRRLWFRNLLRQLGVADAEGLATQLTLLVDGSIAQDLVRDDPAMARAAREAAR 178 +A+ + + + + L + + E LA QL LLV G+I ++ + A A++AA Sbjct: 126 VALEHQHAIYHYIKTLAQAAALTSPEQLARQLLLLVQGAIVVAMMEGSWSTASQAKKAAL 185 Query: 179 VLLANAGIKVGSPA 192 +L+ A P+ Sbjct: 186 ILIQTASTSTLRPS 199 >ref|YP_002541385.1| transcriptional regulator protein [Agrobacterium radiobacter K84] gb|ACM29788.1| transcriptional regulator protein [Agrobacterium radiobacter K84] Length = 211 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 75/183 (40%), Positives = 100/183 (54%), Gaps = 10/183 (5%) Query: 11 KERILETADRLFYLQGIRAIGVDTIAAEIGISKRTLYNHFPSKDALIEAYL--------Q 62 +ERIL+TA LFY I ++G+D I AE G++K T Y HFPSK LI YL Q Sbjct: 23 RERILKTASDLFYRFSIHSVGIDRIIAESGVAKMTFYKHFPSKANLIATYLRYKSDIWFQ 82 Query: 63 RRFVQPRPSDKPPAEQILATFDSLERRFSAKDFRGCPFVNAVAELGPEDEDRTVR-NIAI 121 + P E++LA FD+L+ F + FRGCPFV +AE GPE V+ IA Sbjct: 83 MLATAAERTGLSPLERVLAIFDALDEPFRSPSFRGCPFVKGLAEFGPEANSPDVQATIAF 142 Query: 122 AFKESRRLWFRNLLRQLGVADAEGLATQLTLLVDGSIAQDLVRDDPAMARAAREAARVLL 181 FK + +L+ L ++D E TQ+ L+ GSI DP + + R+AARVLL Sbjct: 143 YFKALHE-FVASLIEPLALSDPEKAVTQILSLIQGSIVMAQSTPDPGLVKTIRDAARVLL 201 Query: 182 ANA 184 NA Sbjct: 202 ENA 204 >ref|ZP_08425893.1| transcriptional regulator, TetR family [Lyngbya majuscula 3L] gb|EGJ35073.1| transcriptional regulator, TetR family [Lyngbya majuscula 3L] Length = 206 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 109/197 (55%), Gaps = 10/197 (5%) Query: 10 MKERILETADRLFYLQGIRAIGVDTIAAEIGISKRTLYNHFPSKDALIEAYLQRR----- 64 +++RILE A LFY +GI+ +G+D I +E G++K +LYNHF SKDALIEA+L++R Sbjct: 11 VRDRILEKASELFYKEGIQNVGIDRIISESGVAKMSLYNHFKSKDALIEAFLRQRGESWR 70 Query: 65 --FVQPRPSDKP-PAEQILATFDSLERRFSAKDFRGCPFVNAVAELGPEDEDRTVRNIAI 121 F++ P E++LA FD L+ F A DFRGC F+NA EL + A+ Sbjct: 71 AWFIETVAQHSSDPKERLLAIFDVLQLWFEAPDFRGCAFINATVELAKPNHPGY--QAAL 128 Query: 122 AFKESRRLWFRNLLRQLGVADAEGLATQLTLLVDGSIAQDLVRDDPAMARAAREAARVLL 181 +++ + +L + G+ D E LA Q LLV GSI ++ + A + A LL Sbjct: 129 EHQQAVYAYILDLAQATGITDPELLARQFLLLVQGSIVVAMMEGNSIAAAQGKTVASGLL 188 Query: 182 ANAGIKVGSPAPAGKKR 198 N VGS +KR Sbjct: 189 GNRESGVGSRESGSQKR 205 >ref|NP_478170.1| transcriptional regulator [Nostoc sp. PCC 7120] dbj|BAB77166.1| transcriptional regulator [Nostoc sp. PCC 7120] Length = 190 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 105/183 (57%), Gaps = 10/183 (5%) Query: 11 KERILETADRLFYLQGIRAIGVDTIAAEIGISKRTLYNHFPSKDALIEAYLQR------R 64 +++ILETA LFY +GI+ +G++ + A G++KRTLY F SKD LIE ++ R Sbjct: 9 RQQILETASLLFYQKGIQHVGINEVIAASGVAKRTLYRWFSSKDQLIEEVMKYRAAQWLR 68 Query: 65 FVQPRPSDK--PPAEQILATFDSLERRFSAKDFRGCPFVNAVAELGPEDEDRTVRNIAIA 122 + + +D+ P E++LATFD L+ ++ DFRGCPF+NAV E+ D +++ Sbjct: 69 WFENAVADQGNTPKERLLATFDVLQGWYALPDFRGCPFINAVLEIA--DASHPAHQVSVQ 126 Query: 123 FKESRRLWFRNLLRQLGVADAEGLATQLTLLVDGSIAQDLVRDDPAMARAAREAARVLLA 182 +ES R + L Q GV D E + Q LL+ G+ + +P A+ AR A VL+ Sbjct: 127 LRESIRTYIMQLAEQAGVRDPESFSQQYLLLIGGASLMATIEGNPIGAQYARNALSVLID 186 Query: 183 NAG 185 +G Sbjct: 187 ASG 189