BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0138.0004.p         (121 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_533170.1| response regulator receiver domain-containing p...   242   2e-62
ref|YP_577693.1| response regulator receiver domain-containing p...   241   2e-62
ref|NP_771764.1| two-component response regulator [Bradyrhizobiu...   241   2e-62
ref|YP_318044.1| response regulator receiver [Nitrobacter winogr...   239   7e-62
ref|NP_948472.1| CheY-like response regulator receiver [Rhodopse...   239   1e-61

>ref|YP_533170.1| response regulator receiver domain-containing protein
           [Rhodopseudomonas palustris BisB18]
 gb|ABD88851.1| response regulator receiver domain protein (CheY-like)
           [Rhodopseudomonas palustris BisB18]
          Length = 121

 Score =  242 bits (617), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 117/121 (96%), Positives = 120/121 (99%)

Query: 1   MAKTVLIVEDNELNMKLFRDLLEAHGYQTSGTSNGFEALDLVRKLRPDLILMDIQLPQVS 60
           MAKTVLIVEDNELNMKLFRDLLEAHGYQTSGTSNG+EAL+LVRKLRPDLILMDIQLPQVS
Sbjct: 1   MAKTVLIVEDNELNMKLFRDLLEAHGYQTSGTSNGYEALELVRKLRPDLILMDIQLPQVS 60

Query: 61  GLEVTRWIKDDPDLRTIPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFI 120
           GLEVTRWIKDDP+LR IPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFI
Sbjct: 61  GLEVTRWIKDDPELRAIPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFI 120

Query: 121 G 121
           G
Sbjct: 121 G 121


>ref|YP_577693.1| response regulator receiver domain-containing protein [Nitrobacter
           hamburgensis X14]
 gb|ABE63233.1| response regulator receiver domain protein (CheY-like) [Nitrobacter
           hamburgensis X14]
          Length = 121

 Score =  241 bits (616), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 116/121 (95%), Positives = 120/121 (99%)

Query: 1   MAKTVLIVEDNELNMKLFRDLLEAHGYQTSGTSNGFEALDLVRKLRPDLILMDIQLPQVS 60
           MAKTVLIVEDNELNMKLFRDLLEAHGYQTSGTSNGFEALDLVRKLRPDL+LMDIQLPQVS
Sbjct: 1   MAKTVLIVEDNELNMKLFRDLLEAHGYQTSGTSNGFEALDLVRKLRPDLVLMDIQLPQVS 60

Query: 61  GLEVTRWIKDDPDLRTIPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFI 120
           GL+VTRWIKDDP+LR IPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRF+
Sbjct: 61  GLDVTRWIKDDPELRAIPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFV 120

Query: 121 G 121
           G
Sbjct: 121 G 121


>ref|NP_771764.1| two-component response regulator [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC50389.1| two-component response regulator [Bradyrhizobium japonicum USDA
           110]
          Length = 121

 Score =  241 bits (616), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 115/121 (95%), Positives = 121/121 (100%)

Query: 1   MAKTVLIVEDNELNMKLFRDLLEAHGYQTSGTSNGFEALDLVRKLRPDLILMDIQLPQVS 60
           MAKTVLIVEDNELNMKLFRDLLEAHGYQT+GTSNG+EALDLVRK+RPDL+LMDIQLPQVS
Sbjct: 1   MAKTVLIVEDNELNMKLFRDLLEAHGYQTTGTSNGYEALDLVRKMRPDLVLMDIQLPQVS 60

Query: 61  GLEVTRWIKDDPDLRTIPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFI 120
           GLEVTRWIKDDP+LR+IPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFI
Sbjct: 61  GLEVTRWIKDDPELRSIPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFI 120

Query: 121 G 121
           G
Sbjct: 121 G 121


>ref|YP_318044.1| response regulator receiver [Nitrobacter winogradskyi Nb-255]
 gb|ABA04692.1| response regulator receiver [Nitrobacter winogradskyi Nb-255]
          Length = 121

 Score =  239 bits (611), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 115/121 (95%), Positives = 119/121 (98%)

Query: 1   MAKTVLIVEDNELNMKLFRDLLEAHGYQTSGTSNGFEALDLVRKLRPDLILMDIQLPQVS 60
           MAKTVLIVEDNELNMKLFRDLLEAHGY TSGTSNGFEALDLVRKLRPDL+LMDIQLPQVS
Sbjct: 1   MAKTVLIVEDNELNMKLFRDLLEAHGYHTSGTSNGFEALDLVRKLRPDLVLMDIQLPQVS 60

Query: 61  GLEVTRWIKDDPDLRTIPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFI 120
           GL+VTRWIKDDP+LR IPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRF+
Sbjct: 61  GLDVTRWIKDDPELRAIPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFV 120

Query: 121 G 121
           G
Sbjct: 121 G 121


>ref|NP_948472.1| CheY-like response regulator receiver [Rhodopseudomonas palustris
           CGA009]
 ref|YP_001992517.1| response regulator receiver protein [Rhodopseudomonas palustris
           TIE-1]
 ref|YP_004108618.1| response regulator receiver protein [Rhodopseudomonas palustris
           DX-1]
 emb|CAE28574.1| response regulator receiver (CheY-like protein) [Rhodopseudomonas
           palustris CGA009]
 gb|ACF02042.1| response regulator receiver protein [Rhodopseudomonas palustris
           TIE-1]
 gb|ADU43885.1| response regulator receiver protein [Rhodopseudomonas palustris
           DX-1]
          Length = 121

 Score =  239 bits (610), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 116/121 (95%), Positives = 119/121 (98%)

Query: 1   MAKTVLIVEDNELNMKLFRDLLEAHGYQTSGTSNGFEALDLVRKLRPDLILMDIQLPQVS 60
           MAKTVLIVEDNELNMKLFRDLLEAHGYQT+GTSNG+EALDLVRKLRPDLILMDIQLPQVS
Sbjct: 1   MAKTVLIVEDNELNMKLFRDLLEAHGYQTAGTSNGYEALDLVRKLRPDLILMDIQLPQVS 60

Query: 61  GLEVTRWIKDDPDLRTIPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFI 120
           GLEVTRWIKDD +LR IPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFI
Sbjct: 61  GLEVTRWIKDDAELRHIPVVAVTAFAMKGDEERIREGGCEAYLSKPISVGKFIETVRRFI 120

Query: 121 G 121
           G
Sbjct: 121 G 121