BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0138.0001.p         (133 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771770.1| hypothetical protein bll5130 [Bradyrhizobium ja...   245   2e-63
ref|ZP_08630207.1| endoribonuclease L-PSP [Bradyrhizobiaceae bac...   181   4e-44
ref|ZP_02732204.1| hypothetical protein GobsU_10403 [Gemmata obs...   117   7e-25
ref|ZP_08700613.1| translational inhibitor protein [Citromicrobi...   112   2e-23
ref|ZP_06915375.1| pyrimidine utilization protein C [Streptomyce...   110   9e-23

>ref|NP_771770.1| hypothetical protein bll5130 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50395.1| bll5130 [Bradyrhizobium japonicum USDA 110]
          Length = 218

 Score =  245 bits (625), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 117/133 (87%), Positives = 125/133 (93%)

Query: 1   MSELNHLRPSGLHHNPAYSHVVVASGARTIYISGQVSVDEEGRVVGAGDLAAQTTQVMQN 60
           M +L+HLRPSGLHHNPAYSHVV A+GARTIYISGQVS DEEGR+VG GD+AAQTTQVMQN
Sbjct: 86  MPKLDHLRPSGLHHNPAYSHVVTATGARTIYISGQVSTDEEGRIVGEGDIAAQTTQVMQN 145

Query: 61  LGMALKAAGAGYSNIVKITTFVVGYKPELRPIIGKARLAFFEGMEPPASTLVGVTALAAP 120
           LG+ALKAAGA Y+NIVKITTFVV YKPELRPIIGKAR AFFEGMEPPASTLVGV+ALAAP
Sbjct: 146 LGLALKAAGASYANIVKITTFVVNYKPELRPIIGKARSAFFEGMEPPASTLVGVSALAAP 205

Query: 121 EWLIEIEAVAVTD 133
           EWLIEIEAVAV D
Sbjct: 206 EWLIEIEAVAVAD 218


>ref|ZP_08630207.1| endoribonuclease L-PSP [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07080.1| endoribonuclease L-PSP [Bradyrhizobiaceae bacterium SG-6C]
          Length = 133

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 92/132 (69%), Positives = 112/132 (84%)

Query: 1   MSELNHLRPSGLHHNPAYSHVVVASGARTIYISGQVSVDEEGRVVGAGDLAAQTTQVMQN 60
           M++L    P+GL  NPAYS VVVASGARTIYISGQV++DE+G +VGAGDL+AQTTQVM+N
Sbjct: 1   MAKLEQPHPTGLFQNPAYSQVVVASGARTIYISGQVALDEKGAIVGAGDLSAQTTQVMKN 60

Query: 61  LGMALKAAGAGYSNIVKITTFVVGYKPELRPIIGKARLAFFEGMEPPASTLVGVTALAAP 120
           +G+AL AA A ++++ KITT+VVGY+PE R II KAR  FF  M PPASTLVGV+ALAAP
Sbjct: 61  IGLALAAANATFADVAKITTYVVGYRPEHRAIIAKARTPFFANMPPPASTLVGVSALAAP 120

Query: 121 EWLIEIEAVAVT 132
           EWLIEIEA+A+T
Sbjct: 121 EWLIEIEAIAIT 132


>ref|ZP_02732204.1| hypothetical protein GobsU_10403 [Gemmata obscuriglobus UQM 2246]
          Length = 133

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 67/127 (52%), Positives = 85/127 (66%)

Query: 5   NHLRPSGLHHNPAYSHVVVASGARTIYISGQVSVDEEGRVVGAGDLAAQTTQVMQNLGMA 64
            ++ P  L+    YSHVVVA   +TIY+SGQVS++E+  VVG GD+ AQ   V QNL  A
Sbjct: 4   QYINPPELNPANGYSHVVVAPAGKTIYVSGQVSLNEKAEVVGKGDVRAQVEHVFQNLKAA 63

Query: 65  LKAAGAGYSNIVKITTFVVGYKPELRPIIGKARLAFFEGMEPPASTLVGVTALAAPEWLI 124
           L AAGA + ++VK+T +VVG KPE  P I + R  +     PPASTLVGV ALA  +WL+
Sbjct: 64  LGAAGATFDDVVKVTYYVVGLKPEHLPHIREIRAKYLNQKTPPASTLVGVAALAVADWLV 123

Query: 125 EIEAVAV 131
           EIE VAV
Sbjct: 124 EIEVVAV 130


>ref|ZP_08700613.1| translational inhibitor protein [Citromicrobium sp. JLT1363]
          Length = 134

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/116 (50%), Positives = 80/116 (68%)

Query: 18  YSHVVVASGARTIYISGQVSVDEEGRVVGAGDLAAQTTQVMQNLGMALKAAGAGYSNIVK 77
           +SH V + G RT++++GQV+ D E  VVGA DLAAQT Q + NL   L  AGAG  ++V+
Sbjct: 19  FSHAVESRGQRTLHLAGQVAWDPECNVVGADDLAAQTRQALANLKAVLAEAGAGPEHVVR 78

Query: 78  ITTFVVGYKPELRPIIGKARLAFFEGMEPPASTLVGVTALAAPEWLIEIEAVAVTD 133
           + T++V +KPE   ++     AF++G  P A+TL+GV ALA PE+LIEIEA AV D
Sbjct: 79  LRTYIVDHKPEKLGVVLPEIGAFYDGATPAANTLIGVAALAMPEFLIEIEATAVLD 134


>ref|ZP_06915375.1| pyrimidine utilization protein C [Streptomyces sviceus ATCC 29083]
 gb|EDY59053.1| pyrimidine utilization protein C [Streptomyces sviceus ATCC 29083]
          Length = 135

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/130 (47%), Positives = 82/130 (63%), Gaps = 3/130 (2%)

Query: 7   LRPSGLHHNPAYSHVVVASGARTIYISGQVSVDEEGRVVGAGDLAAQTTQVMQNLGMALK 66
           L P GL     Y  V VASG+R ++++GQV+ D EGR VGAGDLAAQ  Q   N+G AL 
Sbjct: 6   LNPDGLPEIDVYRQVAVASGSRLVFVAGQVAWDAEGRTVGAGDLAAQVEQSYLNVGTALA 65

Query: 67  AAGAGYSNIVKITTFVVGYKPELRPII--GKARLAFFEGMEP-PASTLVGVTALAAPEWL 123
           AAGA + ++ K+   VV + P+  P +  G +R A   G+ P P +TL+GV AL  P+ L
Sbjct: 66  AAGASFDDVAKLNVHVVDWTPDKMPQLLEGISRAAAKLGVTPVPPATLLGVAALDVPDHL 125

Query: 124 IEIEAVAVTD 133
           +EIEA AV D
Sbjct: 126 VEIEATAVLD 135