BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0137.0074.p (408 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002495069.1| branched-chain amino acid ABC transporter pe... 562 e-158 ref|YP_003448590.1| branched chain amino acid binding protein [A... 489 e-136 ref|NP_773288.1| ABC transporter substrate-binding protein [Brad... 472 e-131 ref|YP_568393.1| ABC-type branched-chain amino acid transport sy... 463 e-128 ref|YP_001205085.1| putative branched-chain amino acid ABC trans... 463 e-128 >ref|YP_002495069.1| branched-chain amino acid ABC transporter periplasmic protein [Methylobacterium nodulans ORS 2060] gb|ACL62577.1| ABC-type branched-chain amino acid transport systems, periplasmic component [Methylobacterium nodulans ORS 2060] Length = 411 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 265/396 (66%), Positives = 325/396 (82%), Gaps = 1/396 (0%) Query: 13 GTLFGLALTLATATSASAQNVPVRLGVLTDMSSLYADNGGQGSVVAVQMAVDDFKGRVLG 72 G+L L LA + + + PVR+GVLTD+SSLYADN G GSVVA +MAV+DF GRVLG Sbjct: 15 GSLALTGLWLAVSPAVAEGGPPVRIGVLTDLSSLYADNSGNGSVVAARMAVEDFGGRVLG 74 Query: 73 RPIEIVAGDHQNKADIGSAITRRWLENENVEAILDVPNSAVALAVQGITRDKKKLFLATG 132 RPIE++A DHQNK D+G+A+ RRWL+ ++V+ I DVPNSA+ALAVQ ITR++++ FLA+G Sbjct: 75 RPIEVIAADHQNKTDVGAALARRWLDADDVKVIADVPNSAIALAVQDITRERRRFFLASG 134 Query: 133 AATSRLTGDECSPTGIHWTYDTYALSQGTTRAISRLGAKSWFFLSADYSLGAQLEADSRK 192 AATSRLTGD CSPTGIHWTYDTYAL+QGT RA++R G KSW+F++ADY+LG Q E D R+ Sbjct: 135 AATSRLTGDACSPTGIHWTYDTYALAQGTARAVTRRGGKSWYFVTADYALGTQFEEDGRR 194 Query: 193 VIDATGGKVVGAVKHPINTPDLSSFLLQAQASRADVIALADAGGDFINAVKQAGEFGVT- 251 VI A GG+V+G+V+H I +PD SS+LLQAQ S A V+ LADAGGD I A+KQA EFGV Sbjct: 195 VIQAAGGRVLGSVRHSIGSPDFSSYLLQAQGSGAQVVGLADAGGDLILALKQAAEFGVVQ 254 Query: 252 GGQKLAGLIVFIADIHSLGLQSAQGLMLSSAFYWDLNDETRAWSKRFIEKTKKVPTMIHA 311 GQ LAGL+VFIADIH LGL +AQGL+LS+AFYWDLNDETRAWS+RF+ +T KVPTMIHA Sbjct: 255 SGQTLAGLLVFIADIHGLGLPAAQGLILSTAFYWDLNDETRAWSQRFVARTNKVPTMIHA 314 Query: 312 GTYGAVMHYLKAVEAAGTLDGPTVAAKMRELPVNDFMTRNGRIRPDGRLVRDMYLFRVKS 371 GT+GAV HYL+A+ AA T DGPT AA+MR++PVN+FMTR+G IR DG LVRD+YL +VKS Sbjct: 315 GTFGAVTHYLRAMAAANTDDGPTGAAQMRKMPVNNFMTRDGHIREDGPLVRDIYLMQVKS 374 Query: 372 PEESKYQFDYYQLLAMIPGEEAFRPMEEGGCSLVKK 407 P ESK +FDYY+LL IPGEEAFR + G C LV + Sbjct: 375 PAESKTRFDYYKLLETIPGEEAFRLISAGNCPLVTR 410 >ref|YP_003448590.1| branched chain amino acid binding protein [Azospirillum sp. B510] dbj|BAI72046.1| branched chain amino acid binding protein [Azospirillum sp. B510] Length = 409 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 225/374 (60%), Positives = 292/374 (78%), Gaps = 2/374 (0%) Query: 35 VRLGVLTDMSSLYADNGGQGSVVAVQMAVDDFKGRVLGRPIEIVAGDHQNKADIGSAITR 94 V++GVL D S LYAD GG+GS VA +MA ++F ++LG+PIEI+ DHQNK DIGS + R Sbjct: 36 VKIGVLNDRSGLYADLGGEGSAVAARMAAEEFGNKILGKPIEIITADHQNKPDIGSNLAR 95 Query: 95 RWLENENVEAILDVPNSAVALAVQGITRDKKKLFLATGAATSRLTGDECSPTGIHWTYDT 154 +W++ E V+ I+DVPNS VALAVQ +T++KK +FL G ATSRLTGD CSPTG HW YDT Sbjct: 96 QWIDQEGVDVIVDVPNSGVALAVQEVTKEKKTIFLMEGPATSRLTGDACSPTGFHWAYDT 155 Query: 155 YALSQGTTRAISRLGAKSWFFLSADYSLGAQLEADSRKVIDATGGKVVGAVKHPINTPDL 214 +AL+ GT +A+ + G SW+F++ADY+ G QLEAD+ + GGKV+G+VK P+NT D Sbjct: 156 HALAVGTGQAMVKEGGDSWYFITADYAFGHQLEADTSAEVKKAGGKVLGSVKAPLNTADF 215 Query: 215 SSFLLQAQASRADVIALADAGGDFINAVKQAGEFGVT--GGQKLAGLIVFIADIHSLGLQ 272 SSFLLQAQ+S A ++ LA+AGGD I ++KQA EFG+T G QKLAGL++F++D+H+LGL Sbjct: 216 SSFLLQAQSSGAKIVGLANAGGDTITSIKQASEFGLTQSGQQKLAGLLIFLSDVHALGLP 275 Query: 273 SAQGLMLSSAFYWDLNDETRAWSKRFIEKTKKVPTMIHAGTYGAVMHYLKAVEAAGTLDG 332 AQ LML++ FYWD +DE+RAWSK+F ++ K+PTM+ AG+Y AV HYLKAVEAAGT DG Sbjct: 276 VAQDLMLTTGFYWDRDDESRAWSKKFFDRFGKMPTMVQAGSYSAVRHYLKAVEAAGTDDG 335 Query: 333 PTVAAKMRELPVNDFMTRNGRIRPDGRLVRDMYLFRVKSPEESKYQFDYYQLLAMIPGEE 392 PTVAAKM+E+PVND +NG I P+GR+V DMYL RVK P ESK +DYYQ+L IPG++ Sbjct: 336 PTVAAKMKEMPVNDMFAKNGTILPNGRMVHDMYLARVKKPSESKGAWDYYQILRTIPGKD 395 Query: 393 AFRPMEEGGCSLVK 406 AF +EE GC L K Sbjct: 396 AFASVEESGCKLPK 409 >ref|NP_773288.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51913.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 403 Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust. Identities = 221/398 (55%), Positives = 297/398 (74%), Gaps = 4/398 (1%) Query: 11 VAGTLFGLALTLATATSASAQ--NVPVRLGVLTDMSSLYADNGGQGSVVAVQMAVDDFKG 68 +A T GLAL AT +A AQ + V++GVLTDMSSLYAD G+GS+ AV+MAV D+ Sbjct: 5 IAATAVGLALA-ATCGTAQAQISDDVVKIGVLTDMSSLYADATGKGSLAAVEMAVADYGA 63 Query: 69 RVLGRPIEIVAGDHQNKADIGSAITRRWLENENVEAILDVPNSAVALAVQGITRDKKKLF 128 +V G+P+++VA DHQNK D+G I R W +N+ V+AI DVP S+VAL + +TR+K K+ Sbjct: 64 KVAGKPVQVVAADHQNKPDVGVNIARNWYDNDKVDAIFDVPTSSVALPISALTREKNKIN 123 Query: 129 LATGAATSRLTGDECSPTGIHWTYDTYALSQGTTRAISRLGAKSWFFLSADYSLGAQLEA 188 + +G +S +TG CSP +HWTYDTYALS +A+ + G +W+F++ADY+ G L+ Sbjct: 124 INSGGGSSDITGVACSPNTVHWTYDTYALSNVAGKAMVKRGEDTWYFVTADYAFGMALQR 183 Query: 189 DSRKVIDATGGKVVGAVKHPINTPDLSSFLLQAQASRADVIALADAGGDFINAVKQAGEF 248 D+ V+ +GGKV+G V+HP+N+ D SSFLLQAQAS+A V+ALA+AGGD NA+KQA EF Sbjct: 184 DAANVVKESGGKVLGEVRHPLNSSDFSSFLLQAQASKAKVVALANAGGDTTNALKQAAEF 243 Query: 249 GVT-GGQKLAGLIVFIADIHSLGLQSAQGLMLSSAFYWDLNDETRAWSKRFIEKTKKVPT 307 G+T GGQK+ L+ I D HSLG+++ QGL+++ AFYWD+N+ETRA+SKRF EK +PT Sbjct: 244 GLTQGGQKMIALLQEITDTHSLGIKATQGLIVTDAFYWDMNEETRAFSKRFNEKVGHMPT 303 Query: 308 MIHAGTYGAVMHYLKAVEAAGTLDGPTVAAKMRELPVNDFMTRNGRIRPDGRLVRDMYLF 367 MI AG Y A MHYLKA+EA T + P V +MR PVNDF +NG+IR DGR+V DMYLF Sbjct: 304 MIQAGLYSATMHYLKAIEAIKTDEAPKVMEQMRSTPVNDFFAKNGKIRIDGRMVHDMYLF 363 Query: 368 RVKSPEESKYQFDYYQLLAMIPGEEAFRPMEEGGCSLV 405 VK PEESK ++D Y+L+A +PG+EAFRP+++GGC LV Sbjct: 364 EVKKPEESKGEWDLYKLIATVPGDEAFRPLDKGGCPLV 401 >ref|YP_568393.1| ABC-type branched-chain amino acid transport systems, periplasmic component [Rhodopseudomonas palustris BisB5] gb|ABE38492.1| ABC-type branched-chain amino acid transport systems, periplasmic component [Rhodopseudomonas palustris BisB5] Length = 427 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 217/381 (56%), Positives = 283/381 (74%), Gaps = 2/381 (0%) Query: 29 SAQNVPVRLGVLTDMSSLYADNGGQGSVVAVQMAVDDFKGRVLGRPIEIVAGDHQNKADI 88 SA PVR+GVLTDMS L+AD G G+V+AV+MAVDDF G+VLGRPIE+++ DHQNKAD+ Sbjct: 47 SADTSPVRIGVLTDMSGLFADISGHGAVIAVKMAVDDFGGKVLGRPIEVLSADHQNKADV 106 Query: 89 GSAITRRWLENENVEAILDVPNSAVALAVQGITRDKKKLFLATGAATSRLTGDECSPTGI 148 G ++ R W++ +NV + D+ NS+VAL V +TR+K ++ + GA+TS +T ++C+P I Sbjct: 107 GLSLARAWIDEKNVVMLADLMNSSVALGVMELTRNKDRIAIVNGASTSVITNEKCTPNSI 166 Query: 149 HWTYDTYALSQGTTRAISRLGAKSWFFLSADYSLGAQLEADSRKVIDATGGKVVGAVKHP 208 H+T+DTYAL++GT A+ G K W L AD++ G QL DSR+ ++A GG VV +KHP Sbjct: 167 HYTWDTYALARGTANAVVNRGKKKWALLEADFAYGHQLANDSRRFVEAAGGAVVSEIKHP 226 Query: 209 INTPDLSSFLLQAQASRADVIALADAGGDFINAVKQAGEFGV--TGGQKLAGLIVFIADI 266 INT D SSFLLQAQ+S ADVIALA+ G D IN++K A EFG+ G Q++ GL + + D Sbjct: 227 INTSDFSSFLLQAQSSGADVIALANGGADTINSIKSAAEFGIGRGGKQQVVGLAINLNDT 286 Query: 267 HSLGLQSAQGLMLSSAFYWDLNDETRAWSKRFIEKTKKVPTMIHAGTYGAVMHYLKAVEA 326 +LGL +AQGL+L+ AFYWD NDETRAWSKRF+EK K+PT AG Y + MHYLKAV A Sbjct: 287 KALGLDAAQGLLLTEAFYWDRNDETRAWSKRFLEKFGKMPTSTQAGDYSSTMHYLKAVAA 346 Query: 327 AGTLDGPTVAAKMRELPVNDFMTRNGRIRPDGRLVRDMYLFRVKSPEESKYQFDYYQLLA 386 AGTLD TV AKMR+ PV+DF + G+IR DGR+V DMYL VK P ESK +D+Y +LA Sbjct: 347 AGTLDAQTVMAKMRDTPVDDFFAKGGKIRIDGRMVHDMYLAEVKKPSESKGPWDFYNILA 406 Query: 387 MIPGEEAFRPMEEGGCSLVKK 407 IPG++AFRP+ E C LVKK Sbjct: 407 TIPGDQAFRPLSESACPLVKK 427 >ref|YP_001205085.1| putative branched-chain amino acid ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL76848.1| putative branched-chain amino acid ABC transporter, substrate-binding protein [Bradyrhizobium sp. ORS 278] Length = 409 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 218/403 (54%), Positives = 296/403 (73%), Gaps = 3/403 (0%) Query: 6 RSALSVAGTLFGLALTLATATSASAQNVPVRLGVLTDMSSLYADNGGQGSVVAVQMAVDD 65 R+ L+ G GLALTL TA A AQ P+++GVL+D SS+Y+D GGQG++ A ++A+++ Sbjct: 9 RTCLAAVGLFAGLALTL-TAAPARAQ-APLKIGVLSDFSSVYSDIGGQGNLEATKLAIEE 66 Query: 66 FKGRVLGRPIEIVAGDHQNKADIGSAITRRWLENENVEAILDVPNSAVALAVQGITRDKK 125 F G + G+PIE+++ D QNKADI ++I R+W ENE V+ ++D+P SA ALA +++ + Sbjct: 67 FGGTMFGKPIEVISADPQNKADIAASIVRKWYENEAVDMVIDMPTSATALAGMEMSKQFE 126 Query: 126 KLFLATGAATSRLTGDECSPTGIHWTYDTYALSQGTTRAISRLGAKSWFFLSADYSLGAQ 185 KL + T AA+S +TG CSP IHWTYDTY + +AI + G SWFF++ADY G Sbjct: 127 KLMIVTDAASSDITGKSCSPYTIHWTYDTYGNAHTVGQAIVKTGGDSWFFITADYLFGHS 186 Query: 186 LEADSRKVIDATGGKVVGAVKHPINTPDLSSFLLQAQASRADVIALADAGGDFINAVKQA 245 +E D+ V+ A GGKVVG+ +HP+N D SSFLLQAQAS+A +I +A+ GGD IN +KQA Sbjct: 187 IERDTGDVVRAAGGKVVGSARHPLNNQDFSSFLLQAQASKAKIIGMANGGGDTINTIKQA 246 Query: 246 GEFG-VTGGQKLAGLIVFIADIHSLGLQSAQGLMLSSAFYWDLNDETRAWSKRFIEKTKK 304 EFG V GGQ LAG+++FI+DIHSLGL+ AQGL+++ A+YWDLND TRA+ KRF +K K+ Sbjct: 247 AEFGIVAGGQNLAGIVMFISDIHSLGLKLAQGLIITEAYYWDLNDRTRAFGKRFFDKMKR 306 Query: 305 VPTMIHAGTYGAVMHYLKAVEAAGTLDGPTVAAKMRELPVNDFMTRNGRIRPDGRLVRDM 364 +PTM A TY A +HYL AV+AAGT D V AKMRE PV D T NG +R DGR+V M Sbjct: 307 MPTMNQAATYSATLHYLNAVKAAGTRDTKPVLAKMRETPVRDAFTDNGVVREDGRMVHSM 366 Query: 365 YLFRVKSPEESKYQFDYYQLLAMIPGEEAFRPMEEGGCSLVKK 407 +LF VK PEESK +DYY++LA +PG++AFRP+++G C VK+ Sbjct: 367 FLFEVKKPEESKGPWDYYKVLAEVPGDQAFRPLKDGNCPYVKQ 409