BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0137.0067.p         (145 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001520157.1| MarR family transcriptional regulator [Acary...    79   2e-13
ref|ZP_08199483.1| transcriptional regulator PecS [Nocardioidace...    73   1e-11
ref|YP_003513675.1| MarR family transcriptional regulator [Stack...    73   1e-11
ref|ZP_05038922.1| transcriptional regulator, MarR family [Synec...    73   1e-11
ref|YP_929438.1| MarR family transcriptional regulator [Shewanel...    72   3e-11

>ref|YP_001520157.1| MarR family transcriptional regulator [Acaryochloris marina
           MBIC11017]
 gb|ABW30838.1| transcriptional regulator, MarR family [Acaryochloris marina
           MBIC11017]
          Length = 163

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 57/90 (63%)

Query: 33  DSTLYDDIEAAWLAQRPDLDLAAACTLLRLERVNQLHEMRLQDIAKAVGLQTGELYVLLA 92
           D+   D+I A W  +RPDLD++   T+ R+ R+ +  +  + D     GL +GE  VL  
Sbjct: 2   DTDAVDEILAQWRRERPDLDVSPMGTIGRMTRLAKHFQGAMGDTFAKFGLNSGEFDVLAT 61

Query: 93  LRRSGKPYELRPTDLFRALLVTSGAMTKRV 122
           LRRSG+PY+L PT LF A++V+SG MT R+
Sbjct: 62  LRRSGQPYQLSPTQLFHAMMVSSGTMTHRI 91


>ref|ZP_08199483.1| transcriptional regulator PecS [Nocardioidaceae bacterium Broad-1]
 gb|EGD40973.1| transcriptional regulator PecS [Nocardioidaceae bacterium Broad-1]
          Length = 162

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 51/85 (60%)

Query: 38  DDIEAAWLAQRPDLDLAAACTLLRLERVNQLHEMRLQDIAKAVGLQTGELYVLLALRRSG 97
           DD+  AW  +RPDLDL       RL R+++  ++  +D     G+++ E  VL ALRR+G
Sbjct: 6   DDLSEAWAHERPDLDLGPVEIFSRLSRLSRHLDLARRDAFSGSGIESWEFDVLAALRRAG 65

Query: 98  KPYELRPTDLFRALLVTSGAMTKRV 122
            PYEL P  L R  LVTSG MT RV
Sbjct: 66  DPYELSPGRLLRETLVTSGTMTNRV 90


>ref|YP_003513675.1| MarR family transcriptional regulator [Stackebrandtia nassauensis
           DSM 44728]
 gb|ADD44582.1| transcriptional regulator, MarR family [Stackebrandtia nassauensis
           DSM 44728]
          Length = 173

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 55/95 (57%)

Query: 28  QPPTSDSTLYDDIEAAWLAQRPDLDLAAACTLLRLERVNQLHEMRLQDIAKAVGLQTGEL 87
           +P  S +   D I   W  +RPDLDL +     R+ RV++L   RL+ +    G+   E 
Sbjct: 2   EPAQSPADAVDAIVGQWRRERPDLDLDSMAIFGRIHRVSELSRRRLKSVFAPFGIGLSEF 61

Query: 88  YVLLALRRSGKPYELRPTDLFRALLVTSGAMTKRV 122
            V+  LRRSG+P+EL P +L R L++TSG +T R+
Sbjct: 62  DVVATLRRSGEPFELSPKELSRTLMLTSGGLTGRL 96


>ref|ZP_05038922.1| transcriptional regulator, MarR family [Synechococcus sp. PCC 7335]
 gb|EDX87657.1| transcriptional regulator, MarR family [Synechococcus sp. PCC 7335]
          Length = 173

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 50/85 (58%)

Query: 38  DDIEAAWLAQRPDLDLAAACTLLRLERVNQLHEMRLQDIAKAVGLQTGELYVLLALRRSG 97
           D I A W  +RPDLD++    + R  R+       +       GLQ GE  VL  LRRSG
Sbjct: 17  DTILAQWAKERPDLDVSPMGLIGRTTRLAHHFRKAIGATFAEFGLQLGEFDVLATLRRSG 76

Query: 98  KPYELRPTDLFRALLVTSGAMTKRV 122
            PY+L PT+LFR+++V+SG MT R+
Sbjct: 77  APYQLSPTELFRSMMVSSGTMTNRI 101


>ref|YP_929438.1| MarR family transcriptional regulator [Shewanella amazonensis SB2B]
 gb|ABM01769.1| transcriptional regulator, MarR family [Shewanella amazonensis
           SB2B]
          Length = 164

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 52/85 (61%)

Query: 38  DDIEAAWLAQRPDLDLAAACTLLRLERVNQLHEMRLQDIAKAVGLQTGELYVLLALRRSG 97
           D I A W  ++PD+D  +   + RL R+ +  E  +    KA GL+ GE  VL  LRRSG
Sbjct: 9   DKILAQWAKEKPDMDTLSMGIMGRLARLTKHLEQEITLCHKAYGLKPGEFDVLATLRRSG 68

Query: 98  KPYELRPTDLFRALLVTSGAMTKRV 122
            PY L P+DL  A+++TSGAMT R+
Sbjct: 69  APYRLTPSDLLSAMMLTSGAMTNRL 93