BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0137.0053.p         (155 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770653.1| transcriptional regulator [Bradyrhizobium japon...   252   2e-65
ref|YP_470043.1| MarR family transcriptional regulator [Rhizobiu...   236   9e-61
ref|YP_002976267.1| MarR family transcriptional regulator [Rhizo...   235   2e-60
ref|ZP_03506739.1| probable transcriptional regulator protein, M...   234   2e-60
ref|YP_768509.1| MarR family transcriptional regulator [Rhizobiu...   234   4e-60

>ref|NP_770653.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49278.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
           110]
          Length = 156

 Score =  252 bits (643), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/154 (79%), Positives = 137/154 (88%)

Query: 1   VTRSSKAETRGRKLSNFLCFAVYSANLAFGRAYKPILDAVGLTYTQYIAMVALSEADEQT 60
           + RS KA  +GRKLSNFLCFAVYSANLAFGRAYKP+LD VGLTYTQYIA+VALSE DEQT
Sbjct: 1   MARSPKAAGKGRKLSNFLCFAVYSANLAFGRAYKPLLDKVGLTYTQYIALVALSEEDEQT 60

Query: 61  VSALGEKLFLESNTLTPILKKLEQSSYISRVRDPADERQVRVSLTPAGRRLLDKDINVSL 120
           VSALGEKLFLESNTLTPILKKLEQ+ YI R RDPADERQVRVSLTP GR+L+++D+  SL
Sbjct: 61  VSALGEKLFLESNTLTPILKKLEQTGYIRRHRDPADERQVRVSLTPGGRKLIEQDLGESL 120

Query: 121 VEATGLGDEFPVVQKTVARLRDNLLRNTRADPKK 154
           +EATGLGD+FPVVQKTV+ LRDNLLR T+   +K
Sbjct: 121 IEATGLGDDFPVVQKTVSTLRDNLLRATQTGAEK 154


>ref|YP_470043.1| MarR family transcriptional regulator [Rhizobium etli CFN 42]
 gb|ABC91316.1| probable transcriptional regulator protein, MarR family [Rhizobium
           etli CFN 42]
          Length = 164

 Score =  236 bits (602), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 130/144 (90%), Gaps = 1/144 (0%)

Query: 11  GRKLSNFLCFAVYSANLAFGRAYKPILDAVGLTYTQYIAMVALSEADEQTVSALGEKLFL 70
           GRKLS FLCFAVYSANLAFGRAYKPILDA+GLTYTQYIAMVALSE D+QTVS LGEKLFL
Sbjct: 21  GRKLSTFLCFAVYSANLAFGRAYKPILDALGLTYTQYIAMVALSEEDDQTVSTLGEKLFL 80

Query: 71  ESNTLTPILKKLEQSSYISRVRDPADERQVRVSLTPAGRRLLDKDINVSLVEATGLGDEF 130
           ESNTLTPILKKLE + +I+R RDPADERQVRVSLTPAGR +L+ D + +L++A GLGD+F
Sbjct: 81  ESNTLTPILKKLESAGFITRHRDPADERQVRVSLTPAGREILETDPSSALIDAVGLGDDF 140

Query: 131 PVVQKTVARLRDNLLRNTRADPKK 154
           PVVQK+V RLRDNLLR  +A+P+K
Sbjct: 141 PVVQKSVTRLRDNLLR-AQAEPQK 163


>ref|YP_002976267.1| MarR family transcriptional regulator [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gb|ACS56728.1| transcriptional regulator, MarR family [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 168

 Score =  235 bits (599), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 113/151 (74%), Positives = 130/151 (86%)

Query: 4   SSKAETRGRKLSNFLCFAVYSANLAFGRAYKPILDAVGLTYTQYIAMVALSEADEQTVSA 63
           S  A   GRKLSNFLCFAVYSANLAFGRAYKPILD +GLTYTQYIAMVALSE D+QTV  
Sbjct: 17  SPPAGKEGRKLSNFLCFAVYSANLAFGRAYKPILDELGLTYTQYIAMVALSEEDDQTVGV 76

Query: 64  LGEKLFLESNTLTPILKKLEQSSYISRVRDPADERQVRVSLTPAGRRLLDKDINVSLVEA 123
           LGEK+FLESNTLTPILKKLE + +I+R RDPADERQVRVSLTPAGR+L++ D   +L+ A
Sbjct: 77  LGEKMFLESNTLTPILKKLESNGFITRHRDPADERQVRVSLTPAGRQLVETDPGNALLGA 136

Query: 124 TGLGDEFPVVQKTVARLRDNLLRNTRADPKK 154
            GLGD+FPVVQK+V  LRDNLLR+T+ +P+K
Sbjct: 137 IGLGDDFPVVQKSVTTLRDNLLRSTQGEPEK 167


>ref|ZP_03506739.1| probable transcriptional regulator protein, MarR family [Rhizobium
           etli Brasil 5]
          Length = 165

 Score =  234 bits (598), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 115/143 (80%), Positives = 128/143 (89%), Gaps = 1/143 (0%)

Query: 12  RKLSNFLCFAVYSANLAFGRAYKPILDAVGLTYTQYIAMVALSEADEQTVSALGEKLFLE 71
           RKLSNFLCFAVYSANLAFGRAYKPILDA+GLTYTQYIAMVALSE D+QTVS LGEKLFLE
Sbjct: 23  RKLSNFLCFAVYSANLAFGRAYKPILDALGLTYTQYIAMVALSEEDDQTVSTLGEKLFLE 82

Query: 72  SNTLTPILKKLEQSSYISRVRDPADERQVRVSLTPAGRRLLDKDINVSLVEATGLGDEFP 131
           SNTLTPILKKLE   +I+R RDPADERQVRVSLTPAGR LL+ D   +L++A GLGD+FP
Sbjct: 83  SNTLTPILKKLESVGFITRHRDPADERQVRVSLTPAGRDLLETDPGSALIDAIGLGDDFP 142

Query: 132 VVQKTVARLRDNLLRNTRADPKK 154
           VVQK+V RLRDNLLR  +A+P+K
Sbjct: 143 VVQKSVTRLRDNLLR-AQAEPQK 164


>ref|YP_768509.1| MarR family transcriptional regulator [Rhizobium leguminosarum bv.
           viciae 3841]
 emb|CAK08414.1| putative MarR family transcriptional regulator [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 157

 Score =  234 bits (596), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 114/151 (75%), Positives = 130/151 (86%)

Query: 4   SSKAETRGRKLSNFLCFAVYSANLAFGRAYKPILDAVGLTYTQYIAMVALSEADEQTVSA 63
           S  A   GRKLSNFLCFAVYSANLAFGRAYKPILD +GLTYTQYIAMVALSE D+QTV  
Sbjct: 6   SPLAGKEGRKLSNFLCFAVYSANLAFGRAYKPILDRLGLTYTQYIAMVALSEEDDQTVGV 65

Query: 64  LGEKLFLESNTLTPILKKLEQSSYISRVRDPADERQVRVSLTPAGRRLLDKDINVSLVEA 123
           LGEK+FLESNTLTPILKKLE + +I+R RDPADERQVRVSLTPAGR+L++ D   +L+ A
Sbjct: 66  LGEKMFLESNTLTPILKKLESNGFITRHRDPADERQVRVSLTPAGRQLVETDPGNALLGA 125

Query: 124 TGLGDEFPVVQKTVARLRDNLLRNTRADPKK 154
           TGLGD+FPVVQK+V  LRDNLLR+T+ +P K
Sbjct: 126 TGLGDDFPVVQKSVTTLRDNLLRSTQGEPGK 156