BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0137.0051.p (266 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770345.1| two-component hybrid sensor and regulator [Brad... 288 8e-76 ref|YP_004108129.1| integral membrane sensor signal transduction... 206 2e-51 ref|YP_001242046.1| putative two component sensor histidine kina... 204 1e-50 ref|NP_773292.1| two-component hybrid sensor and regulator [Brad... 202 3e-50 ref|YP_001207590.1| putative two component sensor histidine kina... 198 6e-49 >ref|NP_770345.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC48970.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum USDA 110] Length = 439 Score = 288 bits (736), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 151/270 (55%), Positives = 188/270 (69%), Gaps = 7/270 (2%) Query: 1 MSWTRRIAALFSFHRISGQIAALILLSLVLIHALIGLYFVGQKPRS--FADRPVHQFQLV 58 MS R++ LF+ RISGQIAALIL +LVLIHALI Y + +P+ D P+ QF+L+ Sbjct: 1 MSRLRKLVRLFTLRRISGQIAALILSTLVLIHALIAGYVLVSRPKPSLLTDEPLQQFELI 60 Query: 59 ARLLAEAPAADRATLLRAADRAFPRLHLTLRDAGPGSSDDASSEVPG-----VDDIDEFS 113 R+L + P +R L+ R P L L L + GP +S ++ +P V + Sbjct: 61 VRILDKTPRNERRVLVENIGRGLPDLQLRLTEGGPRASATPTTAIPSPFDGRVQIVQRRP 120 Query: 114 SKTAPAAVRLPDGALFEATIGPTKMPPFFGGFWVSTFLFLFVSVTLLGVWAGRALSAPLS 173 + L DG + +AT+ +P F G W ST LFL +S+TLLGVWAGRALSAPLS Sbjct: 121 PEQDSVLFDLGDGEVLDATVRTPSIPGFITGLWASTLLFLVISITLLGVWAGRALSAPLS 180 Query: 174 AFARAAENFSISQAAAPLPETGPEEIRAAAVALNRMRERITTLMNDRTRMLAAISHDLRT 233 AFARAAE+FS+S+++APLPE+GPEEIR+AA ALN MR RIT+LMNDRTRMLAAISHDLRT Sbjct: 181 AFARAAESFSLSRSSAPLPESGPEEIRSAAKALNLMRNRITSLMNDRTRMLAAISHDLRT 240 Query: 234 PITRLRLRSEYIENDAQRAETLHDLDQMQA 263 PITRLRLRSEYIE+D QR +TL DLDQMQA Sbjct: 241 PITRLRLRSEYIEDDTQRTQTLRDLDQMQA 270 >ref|YP_004108129.1| integral membrane sensor signal transduction histidine kinase [Rhodopseudomonas palustris DX-1] gb|ADU43396.1| integral membrane sensor signal transduction histidine kinase [Rhodopseudomonas palustris DX-1] Length = 445 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 132/283 (46%), Positives = 171/283 (60%), Gaps = 27/283 (9%) Query: 1 MSWTRRIAAL---FSFHRISGQIAALILLSLVLIHALIGLYFVGQKPRSFADRPV----- 52 MS RR+AAL + GQIA L+L S++ H +I + F +P DRP+ Sbjct: 1 MSAPRRLAALKFGLGLEGVRGQIAILVLASIIASHLIIAVVFFVNRP----DRPMPSPAE 56 Query: 53 -HQFQLVARLLAEAPAADRATLLRAADRAFPRLHLTLRDAGPGSSDDASSEVPGVDDIDE 111 Q +A+L+ + AADR L+ AFPRL LT + +D + P DI E Sbjct: 57 PQQLHALAQLIGRSAAADRPQLIATIAAAFPRLELTAAASP--PADADQRQWP-PHDIAE 113 Query: 112 FSSKTAP-----------AAVRLPDGALFEATIGPTKMPPFFGGFWVSTFLFLFVSVTLL 160 + P + LPDGA A + P + P +G W+++ L VS+ LL Sbjct: 114 LGWRLGPNYRVASLGDGKVVITLPDGAAIGARMPPERRRPPWGNPWMASLLIGVVSLALL 173 Query: 161 GVWAGRALSAPLSAFARAAENFSISQAAAPLPETGPEEIRAAAVALNRMRERITTLMNDR 220 G+WA R L+APLS+FA AAENFS+ + APLPE GP EIR+ A ALNRMR RITTL+ DR Sbjct: 174 GLWAARTLAAPLSSFAAAAENFSLDSSDAPLPERGPAEIRSLARALNRMRGRITTLIEDR 233 Query: 221 TRMLAAISHDLRTPITRLRLRSEYIENDAQRAETLHDLDQMQA 263 TRMLAAISHDLRTPITR+RLR+E+IE++ QR +TLHDLDQM A Sbjct: 234 TRMLAAISHDLRTPITRMRLRAEFIEDEHQRTQTLHDLDQMGA 276 >ref|YP_001242046.1| putative two component sensor histidine kinase [Bradyrhizobium sp. BTAi1] gb|ABQ38140.1| putative two component sensor histidine kinase [Bradyrhizobium sp. BTAi1] Length = 467 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 123/293 (41%), Positives = 163/293 (55%), Gaps = 40/293 (13%) Query: 9 ALFSFHRISGQIAALILLSLVLIHALIG---LYFVGQKPRSFADRPVHQFQLVARLLAEA 65 + I GQI AL+ +S+V +HA+I L + ++P ++ Q R+L A Sbjct: 5 GFLNLKGIRGQITALVAISIVALHAIITATFLIYRAEQPEGESEAGPFQLATAIRILGRA 64 Query: 66 PAADRATLLRAADRAFPRLHLTLRDAGPGSSDDASSEVPGVDD----------------- 108 PA DR L+ RA+P + +GP +D + PG + Sbjct: 65 PADDRPRLMADIVRAYPEFDIKPH-SGPLPTDPGRAPEPGAEGAPSAGGPGFEPHHGPDG 123 Query: 109 ------------------IDEFSSKTAPAAVRLPDGALFEA-TIGPTKMPPFFGGFWVST 149 + S T V LPDG L A T + PPF+G W++T Sbjct: 124 RPPGPGGFRGLGPGYRIFMSPPGSGTRRVVVALPDGDLITAKTPDRPRRPPFWGAPWLTT 183 Query: 150 FLFLFVSVTLLGVWAGRALSAPLSAFARAAENFSISQAAAPLPETGPEEIRAAAVALNRM 209 LF +S TLLG+WA RAL++PLS+FARAAENFS+ A LPE GPEEIR+ A ALNRM Sbjct: 184 ILFALISTTLLGLWAARALTSPLSSFARAAENFSLDGDAPALPERGPEEIRSLARALNRM 243 Query: 210 RERITTLMNDRTRMLAAISHDLRTPITRLRLRSEYIENDAQRAETLHDLDQMQ 262 R+RIT LMNDRT+MLAAISHDLRTP+TR+RLR E++E++ QR+ L DLDQM Sbjct: 244 RQRITALMNDRTKMLAAISHDLRTPLTRMRLRCEFVEDELQRSRMLADLDQMH 296 >ref|NP_773292.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC51917.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum USDA 110] Length = 441 Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 121/272 (44%), Positives = 158/272 (58%), Gaps = 21/272 (7%) Query: 9 ALFSFHRISGQIAALILLSLVLIHALIGLYFVGQKPRSFADRP------VHQFQLVARLL 62 F I GQIAAL+L S V +H ++ F+ +P DRP HQ A LL Sbjct: 5 GFFHLKGIGGQIAALVLASTVALHLVVTAAFLISRP----DRPDTPPDGAHQLTDAALLL 60 Query: 63 AEAPAADRATLLRAADRAFPRLHLTLRDAGPGSSDDASSEVP----------GVDDIDEF 112 A++R L+ RAFP+L + + G + + S G + Sbjct: 61 GSTEASERPRLVADLSRAFPKLGIEMHAPGTAAIVETSDSQHLRGMRRHLGRGYKVVQLA 120 Query: 113 SSKTAP-AAVRLPDGALFEATIGPTKMPPFFGGFWVSTFLFLFVSVTLLGVWAGRALSAP 171 + TA V LPDG++ + P F+G W++ + F+ VT+LG+WA RAL+AP Sbjct: 121 ADDTAHRVGVELPDGSVIAGRVDGGPRPWFWGAPWLTALMTTFICVTVLGLWAARALAAP 180 Query: 172 LSAFARAAENFSISQAAAPLPETGPEEIRAAAVALNRMRERITTLMNDRTRMLAAISHDL 231 LS+FA AAENFS+ A PLPE GPEEIR+ A ALNRM ERI LM+DRTRMLAAISHDL Sbjct: 181 LSSFAEAAENFSLDGEADPLPERGPEEIRSVARALNRMHERIARLMSDRTRMLAAISHDL 240 Query: 232 RTPITRLRLRSEYIENDAQRAETLHDLDQMQA 263 RTPITRLRLR+E+IE++ R L DLDQM++ Sbjct: 241 RTPITRLRLRAEFIEDEVNRKRMLIDLDQMRS 272 >ref|YP_001207590.1| putative two component sensor histidine kinase osmolarity sensor [Bradyrhizobium sp. ORS 278] emb|CAL79373.1| putative two component sensor histidine kinase; putative osmolarity sensor [Bradyrhizobium sp. ORS 278] Length = 467 Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 121/293 (41%), Positives = 158/293 (53%), Gaps = 38/293 (12%) Query: 9 ALFSFHRISGQIAALILLSLVLIHALIG---LYFVGQKPRSFADRPVHQFQLVARLLAEA 65 + I GQI AL+ +S+V +HA+I L + ++P + Q V R+L A Sbjct: 5 GFLNLKGIRGQITALVAISIVALHAIITATFLIYRAEQPPGENEAGPFQLATVIRVLGHA 64 Query: 66 PAADRATLLRAADRAFPRLHLTLRD-----------AGPGSSDDASSEVPGVDDIDEFSS 114 PA +RA LL RA+P + + AGP A P + Sbjct: 65 PADERARLLADIARAYPEFDIKAQSGPLPSDLAQPAAGPERDGTAHGGEPESGPRGPSET 124 Query: 115 KTAPAAVR-----------------------LPDGALFEATIGP-TKMPPFFGGFWVSTF 150 P R LPDG L A + PPF+G W++T Sbjct: 125 AHGPGGFRGLGPGYRVFMPPPGSSAHRVVFALPDGDLISAKAPERPRRPPFWGAPWLTTI 184 Query: 151 LFLFVSVTLLGVWAGRALSAPLSAFARAAENFSISQAAAPLPETGPEEIRAAAVALNRMR 210 LF +S TLLG+WA RAL++PLS+FA+AAENFS+ LPE GPEEIR+ A ALNRMR Sbjct: 185 LFALISTTLLGLWAARALTSPLSSFAKAAENFSLDGEGPALPERGPEEIRSLARALNRMR 244 Query: 211 ERITTLMNDRTRMLAAISHDLRTPITRLRLRSEYIENDAQRAETLHDLDQMQA 263 RIT L+NDRT+MLAAISHDLRTP+TR+RLR E++E++ QR+ L DLDQM A Sbjct: 245 SRITALINDRTKMLAAISHDLRTPLTRMRLRCEFVEDELQRSRMLADLDQMHA 297