BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0137.0045.p (388 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08103561.1| ABC-type branched-chain amino acid transport ... 220 3e-55 ref|ZP_01166089.1| ABC-type branched-chain amino acid transport ... 220 3e-55 ref|ZP_05120496.1| ABC-type branched-chain amino acid transport ... 212 7e-53 ref|NP_937484.1| ABC-type branched-chain amino acid transport sy... 212 1e-52 ref|NP_762863.1| branched-chain amino acid ABC transporter perip... 212 1e-52 >ref|ZP_08103561.1| ABC-type branched-chain amino acid transport system, periplasmic component [Vibrio sinaloensis DSM 21326] gb|EGA69475.1| ABC-type branched-chain amino acid transport system, periplasmic component [Vibrio sinaloensis DSM 21326] Length = 392 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 115/376 (30%), Positives = 206/376 (54%), Gaps = 6/376 (1%) Query: 6 ITCMTLALLACSALLQPARAAEPGEAIRVGAVLPFSGGVELYGQQAKLGLDLAARDINAA 65 C ++L+A LL + EP + I++GAVLP +G +YGQQA G LA +IN + Sbjct: 7 FNCCVVSLMA---LLSSSCTPEPSK-IKIGAVLPLTGTFSIYGQQALKGAQLAIDEINES 62 Query: 66 GGILGRPVEVIYADDKTRPEAAAEAMRSLVEKQGVFAVVGPITSRNLNALVPIAESSKTP 125 GG+LGR +E+I D++T P + + R LV++ VF+++GP++S + A+ +AE+ +TP Sbjct: 63 GGVLGRQLELIIRDNQTNPAKSVKFSRELVQQYQVFSLLGPVSSASRYAMTEVAETFQTP 122 Query: 126 LFYATNYEGGKCSRYLFSFGAVPNQELGQLLPYMTRTFGNTYFLLGADRVWPHQMFGIAQ 185 LFY +YEG SRYL + +P + ++PY+ +T+++ G D +WPH+M Sbjct: 123 LFYGMDYEGQHTSRYLVCYSTIPEHYIEPIVPYLINNVSDTFYIFGYDYIWPHRMSERIT 182 Query: 186 PLIEKLGGKVVATKYTLGTETDFSPLIKEIAASKAKVLLFALK-GDGMDFIRQADEAGLL 244 + + GKV+ T++T ++ P+ + I S A L+ L GDG F+ Q + Sbjct: 183 QSVNQHNGKVLGTEFTAFGVGNYHPVFERIKQSGADNLMLILPGGDGFSFLTQMKQFDFE 242 Query: 245 KDITVAFLGLSEVDLGIFRGKGQN-MVTVVPAVAASEDPAVKAFVARARAAAGAGVAVSN 303 +DI + E L + N ++T + ++ ++ ++FV+ R G V+ Sbjct: 243 RDIQIVAFAADETYLNNLDDESLNGVLTALHFFSSLDNQVTQSFVSNYRNRYGEDAVVTY 302 Query: 304 YVMTHYNTLIALKAAAEKAGKLDKEAIIDAMAGLAIPSPTGPVTLGQDHHAAMNMFIAKT 363 +HY+ + A +AG++DKE +I+A+ ++ +T+ QDHH + M++ + Sbjct: 303 SSKSHYDLVYLFADALSQAGEVDKEKMINALPSTSLYQGGLKLTVRQDHHIDLPMYLGQF 362 Query: 364 QGLELVQVRPLGEIAP 379 + +L ++ LG I+P Sbjct: 363 KDHKLKVIKSLGIISP 378 >ref|ZP_01166089.1| ABC-type branched-chain amino acid transport system, periplasmic component [Oceanospirillum sp. MED92] gb|EAR61657.1| ABC-type branched-chain amino acid transport system, periplasmic component [Oceanospirillum sp. MED92] Length = 383 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 120/386 (31%), Positives = 198/386 (51%), Gaps = 15/386 (3%) Query: 1 MASRSITCMTLALL----ACSALLQPARAAEPGEAIRVGAVLPFSGGVELYGQQAKLGLD 56 M + TC+ L +CSA +P I++G VLP +G E+YGQQ G Sbjct: 1 MGTLYKTCLVLLTFLLIASCSAQKEP---------IKIGVVLPLTGPFEIYGQQGLNGAL 51 Query: 57 LAARDINAAGGILGRPVEVIYADDKTRPEAAAEAMRSLVEKQGVFAVVGPITSRNLNALV 116 LA DIN GG+LG P+E++ D++T P + R L++ + VFA++GP++S A+ Sbjct: 52 LAVEDINQRGGVLGHPIELVVRDNQTDPALSVRLSRELIQIEDVFALLGPVSSAARYAMF 111 Query: 117 PIAESSKTPLFYATNYEGGKCSRYLFSFGAVPNQELGQLLPYMTRTFGNTYFLLGADRVW 176 +A K P+FY +YEG +RYL + VP + ++PY+ G+ +++ G D +W Sbjct: 112 DVANQFKIPMFYGIDYEGRHYNRYLVCYSTVPEHYVDPVIPYLIERSGDRFYIFGYDYIW 171 Query: 177 PHQMFGIAQPLIEKLGGKVVATKYTLGTETDFSPLIKEIAASKAKVLLFALKG-DGMDFI 235 PH+M + + GGK+ ++T D+S + + I ++ L+ L G DG F+ Sbjct: 172 PHRMSERIVAEVNRAGGKISGREFTAFNIKDYSAVFERINQAETDNLMLILPGADGFRFL 231 Query: 236 RQADEAGLLKDITVAFLGLSEVDLGIFRGKG-QNMVTVVPAVAASEDPAVKAFVARARAA 294 Q E K + E L + + +++ + V+ ++P FV R R Sbjct: 232 EQMAEFKFSKPLKTVAFAADETYLNTVKPSALEGVISPLHFVSERQNPVFSRFVERYRER 291 Query: 295 AGAGVAVSNYVMTHYNTLIALKAAAEKAGKLDKEAIIDAMAGLAIPSPTGPVTLGQDHHA 354 G +V+ +HY+ + K A EKAG++D+E ++DA+ GL + S VTL D+H Sbjct: 292 YGESASVTYASKSHYDLIFFFKGALEKAGEMDRERMLDALEGLTLYSGESKVTLRGDNHF 351 Query: 355 AMNMFIAKTQGLELVQVRPLGEIAPE 380 + MF+A+ Q L + LG I P+ Sbjct: 352 NLPMFLAEYQSNRLNVTKALGTIYPD 377 >ref|ZP_05120496.1| ABC-type branched-chain amino acid transport system, periplasmic component [Vibrio parahaemolyticus 16] gb|EED25692.1| ABC-type branched-chain amino acid transport system, periplasmic component [Vibrio parahaemolyticus 16] Length = 384 Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 109/351 (31%), Positives = 193/351 (54%), Gaps = 2/351 (0%) Query: 31 AIRVGAVLPFSGGVELYGQQAKLGLDLAARDINAAGGILGRPVEVIYADDKTRPEAAAEA 90 +I++GAVLP +G +YG+QA G LA +INA GG+LGRP+E+I D++T P + + Sbjct: 24 SIKLGAVLPLTGTFAIYGEQALKGAQLAVDEINANGGVLGRPLELIVRDNQTNPAKSVKL 83 Query: 91 MRSLVEKQGVFAVVGPITSRNLNALVPIAESSKTPLFYATNYEGGKCSRYLFSFGAVPNQ 150 R L+++ VF+++GP++S + A+ +AE +TPLFY +YEG SRYL + +P Sbjct: 84 SRELIQQYQVFSLLGPVSSASRYAMTEVAEEFQTPLFYGIDYEGRHFSRYLICYSTIPEH 143 Query: 151 ELGQLLPYMTRTFGNTYFLLGADRVWPHQMFGIAQPLIEKLGGKVVATKYTLGTETDFSP 210 + ++PY+ G+ +++ G D +WPH+M +E+ GKV T++T D++P Sbjct: 144 YIEPIVPYLVNNVGDNFYIFGYDYIWPHRMSERIVESVERHNGKVSNTEFTAFGVGDYTP 203 Query: 211 LIKEIAASKAKVLLFALKG-DGMDFIRQADEAGLLKDITVAFLGLSEVDLGIFRGKGQN- 268 + + I S+A L+ L G DG +F+ Q ++I V E L + Sbjct: 204 VFERIKQSQANNLMLILPGQDGFNFLNQMASFDFEREIEVVAFAADETYLTNLPSSALDG 263 Query: 269 MVTVVPAVAASEDPAVKAFVARARAAAGAGVAVSNYVMTHYNTLIALKAAAEKAGKLDKE 328 ++T + ++ + A ++FV + G V+ HY+ + + A+ E+ G++DKE Sbjct: 264 VLTALHFFSSLQATAAQSFVTNYQKHFGQESVVTYSSKAHYDLIYLIAASLEEVGEVDKE 323 Query: 329 AIIDAMAGLAIPSPTGPVTLGQDHHAAMNMFIAKTQGLELVQVRPLGEIAP 379 +IDA+ + + + +DHH + M++A+ + L ++ LG I P Sbjct: 324 KLIDALPNTTLYLGDSELRVREDHHVDLPMYLAQFRDGSLSVIKNLGTIRP 374 >ref|NP_937484.1| ABC-type branched-chain amino acid transport system, periplasmic component [Vibrio vulnificus YJ016] ref|YP_004191559.1| branched-chain amino acid ABC transporter periplasmic protein [Vibrio vulnificus MO6-24/O] dbj|BAC97454.1| ABC-type branched-chain amino acid transport system, periplasmic component [Vibrio vulnificus YJ016] gb|ADV89356.1| ABC-type branched-chain amino acid transport system, periplasmic component [Vibrio vulnificus MO6-24/O] Length = 387 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 11/372 (2%) Query: 11 LALLACSALLQPARAAEPGEAIRVGAVLPFSGGVELYGQQAKLGLDLAARDINAAGGILG 70 ++L++CS +P I++GAVLP +G +YG+QA G +LA INA GG+LG Sbjct: 18 VSLVSCS---------QPQTPIKIGAVLPLTGTFAVYGEQAVRGAELAVEQINAKGGVLG 68 Query: 71 RPVEVIYADDKTRPEAAAEAMRSLVEKQGVFAVVGPITSRNLNALVPIAESSKTPLFYAT 130 RP+E++ D+ T P + R L+ + VFA++GP++S + A+ IA +TP+FY Sbjct: 69 RPLELVIRDNATDPAKTVKYSRELILNEDVFALLGPVSSSSRYAMSEIATELRTPMFYGI 128 Query: 131 NYEGGKCSRYLFSFGAVPNQELGQLLPYMTRTFGNTYFLLGADRVWPHQMFGIAQPLIEK 190 +YEG S YL + +P + ++PY+ G+++++ G D +WPH+M +EK Sbjct: 129 DYEGRHYSPYLICYSTIPEHYIAPIVPYLAENVGSSFYIFGYDYIWPHRMSQRIVEEVEK 188 Query: 191 LGGKVVATKYTLGTETDFSPLIKEIAASKAKVLLFALKG-DGMDFIRQADEAGLLKDITV 249 + G++ ++T D++P+++ I S VL+ L G DG +F++Q ++I V Sbjct: 189 VEGEISGIEFTAFGVKDYTPVLERIKRSGTNVLMLILPGSDGFNFLKQMKAFEFEREIQV 248 Query: 250 AFLGLSEVDLGIFRGKG-QNMVTVVPAVAASEDPAVKAFVARARAAAGAGVAVSNYVMTH 308 E L + Q ++T + + ++ + FV GA V+ H Sbjct: 249 VAFAADETYLSNVDSQSLQGVMTALHFFSGLDNAVAREFVQNYHRFHGADAVVTYSSKAH 308 Query: 309 YNTLIALKAAAEKAGKLDKEAIIDAMAGLAIPSPTGPVTLGQDHHAAMNMFIAKTQGLEL 368 Y+ + +KAA EK+G++D E ++ + GL + S V L DHH + M++A+ Q EL Sbjct: 309 YDLIYLIKAAIEKSGRVDGEQLLINLPGLTLYSGEDAVHLRNDHHFDLPMYLAQFQQGEL 368 Query: 369 VQVRPLGEIAPE 380 +R LG I PE Sbjct: 369 NVIRNLGIIKPE 380 >ref|NP_762863.1| branched-chain amino acid ABC transporter periplasmic protein [Vibrio vulnificus CMCP6] gb|AAO07853.1|AE016811_94 ABC-type branched-chain amino acid transport system, periplasmic component [Vibrio vulnificus CMCP6] Length = 387 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 11/372 (2%) Query: 11 LALLACSALLQPARAAEPGEAIRVGAVLPFSGGVELYGQQAKLGLDLAARDINAAGGILG 70 ++L++CS +P I++GAVLP +G +YG+QA G +LA INA GG+LG Sbjct: 18 VSLVSCS---------QPQTPIKIGAVLPLTGTFAVYGEQAVRGAELAVEQINAKGGVLG 68 Query: 71 RPVEVIYADDKTRPEAAAEAMRSLVEKQGVFAVVGPITSRNLNALVPIAESSKTPLFYAT 130 RP+E++ D+ T P + R L+ + VFA++GP++S + A+ IA +TP+FY Sbjct: 69 RPLELVIRDNATDPAKTVKYSRELILNEDVFALLGPVSSSSRYAMSEIATELRTPMFYGI 128 Query: 131 NYEGGKCSRYLFSFGAVPNQELGQLLPYMTRTFGNTYFLLGADRVWPHQMFGIAQPLIEK 190 +YEG S YL + +P + ++PY+ G+++++ G D +WPH+M +EK Sbjct: 129 DYEGRHFSPYLICYSTIPEHYIAPIVPYLAENVGSSFYIFGYDYIWPHRMSQRIVEEVEK 188 Query: 191 LGGKVVATKYTLGTETDFSPLIKEIAASKAKVLLFALKG-DGMDFIRQADEAGLLKDITV 249 + G++ ++T D++P+++ I S VL+ L G DG +F++Q ++I V Sbjct: 189 VEGEISGIEFTAFGVKDYTPVLERIKRSGTNVLMLILPGSDGFNFLKQMKAFEFEREIQV 248 Query: 250 AFLGLSEVDLGIFRGKG-QNMVTVVPAVAASEDPAVKAFVARARAAAGAGVAVSNYVMTH 308 E L + Q ++T + + ++ + FV GA V+ H Sbjct: 249 VAFAADETYLSNVDSQSLQGVMTALHFFSGLDNAVAREFVQNYHRFHGADAVVTYSSKAH 308 Query: 309 YNTLIALKAAAEKAGKLDKEAIIDAMAGLAIPSPTGPVTLGQDHHAAMNMFIAKTQGLEL 368 Y+ + +KAA EK+G++D E ++ + GL + S V L DHH + M++A+ Q EL Sbjct: 309 YDLIYLIKAAIEKSGRVDGEQLLINLPGLTLYSGEDAVHLRNDHHFDLPMYLAQFQQGEL 368 Query: 369 VQVRPLGEIAPE 380 +R LG I PE Sbjct: 369 NVIRNLGIIKPE 380