BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0137.0036.p (1112 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004087982.1| snf2-like protein [Asticcacaulis excentricus... 863 0.0 ref|YP_001767889.1| non-specific serine/threonine protein kinase... 837 0.0 ref|YP_003329341.1| putative helicase [Sinorhizobium meliloti] >... 833 0.0 ref|YP_438039.1| SNF2 family DNA/RNA helicase [Hahella chejuensi... 765 0.0 ref|ZP_01452073.1| Superfamily II DNA/RNA helicase, SNF2 family ... 701 0.0 >ref|YP_004087982.1| snf2-like protein [Asticcacaulis excentricus CB 48] gb|ADU13831.1| SNF2-related protein [Asticcacaulis excentricus CB 48] Length = 1107 Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust. Identities = 487/1100 (44%), Positives = 658/1100 (59%), Gaps = 31/1100 (2%) Query: 27 KAFAYRAQGRVSGLEVSEDLTHVQARVSGTERKPYRVDIALEFDGDRLV--DLDGDCSCP 84 + YR +GRV ++ D ++ARV G+ + YRV++++ G R+ +C+CP Sbjct: 22 RGLTYRLEGRVLSTQLMGDW--LEARVRGSGKTDYRVEVSMR--GFRVSPPQFTAECTCP 77 Query: 85 MAVNCKHVAATLFEALRSPAQAAGAVSQQPQGPAGNGRARPEAAVLPYQIAEWIETVGRS 144 + NCKH A + A + G S+ NG PE LP +WIE + R Sbjct: 78 VQYNCKHAVAAVIAYF---ASSEGEGSEGVPSDETNGAEAPE---LPLSARQWIEDLARL 131 Query: 145 VRDTDYPPDVTQRLLYCLQPGVSGSGIPCMDVSLVSVKILKTGELGSKVSQPSFSEFSVD 204 YP + QR++Y L G P + VS+ S ++ K+G +++ + +F + Sbjct: 132 EAPDTYPDTINQRVVYILSSSGGGVRTPELRVSIKSARLNKSGVFSARLERANFDRAANW 191 Query: 205 RAPKYYLGSDIDILTRLSSEFRS-GYLF---GRRAYSAEVLKWIVATGRAFWRDHSGAPL 260 R P Y L SD+ + L+ S Y + + +L+ +V TGR +W + G Sbjct: 192 RRPAYILDSDVKLYEALNQATHSHTYAYSPLNLKVADFSMLQRLVETGRLYW-EELGPVF 250 Query: 261 RWSEARDGRIEWRQVSKDG-IGPLLIVEGATTLNAEPPVYVDEAAGLIGPIRLNLPGRLS 319 R+GRI+W + D + P L+V+ AT + EPPVYVD L+G I L L + Sbjct: 251 AMGAPRNGRIDWELSASDKHLHPRLLVDQATAFDTEPPVYVDVENALVGRIELPLNPAQA 310 Query: 320 SRLLLAPAIPHAHVAQVAQHLGQKLPGLDPGWLPEPPAAAVKINVDPEPVLRLMLGRKMT 379 L APA+ H V+Q L + P P A + P R Sbjct: 311 RAFLRAPALRPEHAPLVSQALQKAFPQAL---ALAPKALLPPLESHAPPNARFSFTTAKV 367 Query: 380 HAYYYGGDRTPDRVPVARVSFRYGPVE----IEQSESAHRVESFSDGSIHVVTRRKAKEK 435 + DR+PV VSFRYG + + + A +E D TR K EK Sbjct: 368 KPRGWSPLPGADRIPVLEVSFRYGEISRLWRSLKFDPAGTLEVVKDARFIRATRFKEVEK 427 Query: 436 EMAARLTSLGLVDARSAFPLLDAVHTKDLTFAQPAEWLDFLNVEAAGLQAAGFEIRIDDD 495 ++ L + G A +P L + +F P WL FL + L+A G EI D+D Sbjct: 428 DVIDALEATGAELAPILYPELSSTFDGHYSFETPDAWLWFLENDLPRLKALGIEIHFDED 487 Query: 496 FPYRLATSSGVFDADF-ESSGIDWFELALGIEIDGERRDLAPLLAALLSQPGFSPETVKQ 554 FPY+LATS G D ESSGIDW EL GI++DGER DLAPLLA L+ P F E +K Sbjct: 488 FPYQLATSRGELSFDLNESSGIDWLELHAGIDVDGERVDLAPLLADLIKNPTFQIEDLKA 547 Query: 555 LADDGDSVYLPLADGRYLAVAADRFLPIVLALHTL--GEAFVDRSGKIRLSRAQTVPLLG 612 L++ + +Y A GRY +VA R LP++L+LH L G + ++G++R+++A + L Sbjct: 548 LSEGDEPIYFKNAAGRYFSVAVGRLLPLILSLHELRLGAFELAKNGRLRIAKAARI-FLD 606 Query: 613 LEADHFVFRGAENLRRMA--GLLSARGLPCPVLPSDFNAALRPYQTQGVAWLDLLRESGL 670 +D + + ++ R + L+ L LP FNA LRPYQ GVAWL+ LRE+GL Sbjct: 607 FGSDSALSQRDKDALRASYRALVEPSTLRPVTLPDTFNATLRPYQETGVAWLNALRETGL 666 Query: 671 GGVLADDMGLGKTVQILALLALEKARGHLTDPAIVIAPTSLMTNWFNEARKFTPGLRVLV 730 GG+LADDMGLGKTVQ+LA LA EKA G L PA++I PTSL+ NW EA +F PGL++ V Sbjct: 667 GGILADDMGLGKTVQVLAFLAKEKADGRLEKPALIIMPTSLVGNWTAEAARFAPGLKLTV 726 Query: 731 LHGPDRRQSFEAIADHDLVLTTYPLIARDHEVLLAREWHVAVLDEAQTIKNSNTATTRRL 790 LHG R+ E + + D+V+TTYPL+ RDHE L + W +LDEAQ IKN+N ATTR + Sbjct: 727 LHGKSRQDLLEQVPESDVVITTYPLVVRDHEWLKSNAWFAIILDEAQAIKNANAATTRHI 786 Query: 791 QGIRARHRFCLTGTPMENHLGELWSIMSFANPGYLGDRATFVRDWRTPIEKRADLGRARV 850 + + A HRFCL+GTPMENHLGELWS+M F NPG+LGD F R++RTPIEK + R+ Sbjct: 787 RSLEAPHRFCLSGTPMENHLGELWSLMDFVNPGFLGDATRFAREFRTPIEKTRNEEIKRL 846 Query: 851 LTHRIKPFLLRRTKQEVAAELPPKSEFTEGVVLEGSQRELYDAIRLSTSEKVRKAIRERG 910 L R++PFLLRRTK +VA ELPPKS+ E + L G QR+LYD IRLS +VRKAI ERG Sbjct: 847 LVRRVRPFLLRRTKADVAKELPPKSDIIERITLTGKQRDLYDTIRLSLHTQVRKAIAERG 906 Query: 911 LAKSHIVVLEALLRMRQACCDPALLNLGDGVQRPSAKLDRLMEMVEELLSEKRKIIVFSQ 970 LAKSHI+VL+ALL++RQ CCDP+LL + PSAKLDRLMEMV L E R++I+FSQ Sbjct: 907 LAKSHIIVLDALLKLRQVCCDPSLLKIDGTEDAPSAKLDRLMEMVTALAEEGRRLIIFSQ 966 Query: 971 FTSMLALIRKRCDALAIRYSVLTGETKDRRSAIDGFQNGASDLFLISLKAGGVGLNLTAA 1030 FTSML LI R D + Y +LTG+T++R+ +D FQ+G + +FLISLKAGG GLNLT+A Sbjct: 967 FTSMLDLIAARLDKAGLGYGILTGKTQNRKKEVDAFQSGDNPIFLISLKAGGTGLNLTSA 1026 Query: 1031 DTVIIFDPWWNPAVEEQAIDRAHRIGQDKAVFVYRLVAAGTIEEKMDELKARKRALADSI 1090 DTVI++DPWWNPAVE QAIDRA+RIGQDK VFVYRL A GTIE+KMDE+KARK+AL+ ++ Sbjct: 1027 DTVILYDPWWNPAVEAQAIDRAYRIGQDKPVFVYRLCAEGTIEDKMDEMKARKQALSHAL 1086 Query: 1091 FDSQGRIGAALTEEDVQKLF 1110 FD + LT+ D++ LF Sbjct: 1087 FDEDADMVERLTDADIEALF 1106 >ref|YP_001767889.1| non-specific serine/threonine protein kinase [Methylobacterium sp. 4-46] gb|ACA15455.1| Non-specific serine/threonine protein kinase [Methylobacterium sp. 4-46] Length = 1120 Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust. Identities = 523/1130 (46%), Positives = 676/1130 (59%), Gaps = 44/1130 (3%) Query: 13 QKDILGFFSRSAVDKAFAYRAQGRVSGLEVSEDLTHVQARVSGTERKPYRVDIALEFDGD 72 + DI+ +A +Y +GRV LE + + + V G++ +PYR+ + L G Sbjct: 5 RSDIVAACGPNATRAGQSYLREGRV--LEATRNGAGISGEVQGSD-EPYRLVVDLRERGK 61 Query: 73 RLVDLDGDCSCPMAVNCKHVAATLFEALRSPAQAAG-AVSQQPQ---GPAGNGRARPEAA 128 L ++G CSCP+A NCKHVAA L L ++ G V+Q+ + PA R A Sbjct: 62 GL-RIEGTCSCPVARNCKHVAAVLLSLLDEASEPPGDPVAQRLERLLAPAPTARGAARAG 120 Query: 129 -------VLPYQIAEWIETVGRS--VRDTDYPPDVTQRLLYCLQPGVSGSGIPCMDVSLV 179 LP +A W+ + R+ DYP + QRL+Y L ++G G+P + + ++ Sbjct: 121 RPAAQAEALPPALARWVAQLDRAQATAGEDYPRSINQRLVYVLGSLLAGEGLPRLALQVI 180 Query: 180 SVKILKTGELGSKVSQPSFSEFSVDRAPKYYLGSDIDILTRLSSEFRSGYLFGRRAYSAE 239 S ++ K G S+ P + A ++ SD+ I L+ R +GR AY+ + Sbjct: 181 STRLRKDGTF-SEGGSPYLLQAGASPA-RFLRPSDLRIHRLLAGRQRHSIGYGR-AYAYD 237 Query: 240 V--------LKWIVATGRAFWRDHSGAPLRWSEARDGRIEWRQVSKDGIGPLLIVEGATT 291 + L ++ATGR WR+ +G L R GRI WR+ + + + Sbjct: 238 LSDEDAAEILAALLATGRVRWREPNGPALAAGPPRAGRIAWREEADALRAEVTCEDPGAV 297 Query: 292 LNAEPPVYVDEAAGLIGPIRLNLPGRLSSRLLLAPAIPHAHVAQVAQHLGQKLPGLDPGW 351 L A PP YVDEAAGLIGP+ L RL+ L LAP +P VA + L +K+P L Sbjct: 298 LAAAPPAYVDEAAGLIGPVETGLAPRLAGALALAPPVPAEAVAALNAVLAEKVPDLAAHR 357 Query: 352 LPEPPAAAVKINVDPEPVLRLMLGR-KMTHAYYYGGDRTPDRVPVARVSFRYGPVEIEQS 410 P P AA + V P PVLRL + T Y + VP+AR++F YGPV E Sbjct: 358 PPSP--AAEPLRVAPRPVLRLTTAPIRTTIGYGPYAMIDHETVPIARLAFAYGPVRTELG 415 Query: 411 ESAHRVESFSDGSIHVVTRRKAKEKEMAARLTSLGLVDARSAFPLLDAVHTKDLTF-AQP 469 E V S G ++ V R E+E A RL V +P +A H +D Sbjct: 416 EMRAVVPRLSGGRLYAVARDPEAEREAARRLIRENFVPVCERYPA-EAAHGRDFVREGGT 474 Query: 470 AEWLDFLNVEAAGLQAAGFEIRIDDDFPYRLATSSGVFDADF-ESSGIDWFELALGIEID 528 A+W D L+ G+EI DFP RL + G FDA+ E SGIDW EL LG+E+D Sbjct: 475 AQWADAQYWLLPRLREEGWEIETAADFPLRLMRADGAFDAEIREGSGIDWLELQLGVELD 534 Query: 529 GERRDLAPLLAALLSQPGFSPETVKQLADDGDSVYLPLADGRYLAVAADRFLPIVLALHT 588 GER DL + ALL +PGF P + + ++ LPL DGR LA+ R I+ A+ Sbjct: 535 GERIDLVGPILALLRRPGFDPAILDG-PEGEKALVLPLPDGRMLALPPGRLRGILAAI-- 591 Query: 589 LGEAFVDR--SGKIRLSRAQTVPLLGLE---ADHFVFRGAENLRRMAGLLSARGLPCPV- 642 E + R G++RLSRA L LE + ++RG E +R M LSA G PV Sbjct: 592 -AELLIGRDDEGRLRLSRADAAGLAALEEEGGERVIWRGGEAIRAMGRRLSASGGIPPVE 650 Query: 643 LPSDFNAALRPYQTQGVAWLDLLRESGLGGVLADDMGLGKTVQILALLALEKARGHLTDP 702 P+ F A+LRPYQ QG+AWL LRE+G GGVLADDMGLGKTVQ LALLALEKA G L P Sbjct: 651 PPAAFRASLRPYQAQGLAWLAFLRETGFGGVLADDMGLGKTVQALALLALEKAEGRLDRP 710 Query: 703 AIVIAPTSLMTNWFNEARKFTPGLRVLVLHGPDRRQSFEAIADHDLVLTTYPLIARDHEV 762 A+V+APTSLM NW E +F P LRVL LHG DR++ F A+A+HDLVLTTYPLI RDH V Sbjct: 711 ALVVAPTSLMGNWRRETERFAPSLRVLTLHGLDRKEQFGAMAEHDLVLTTYPLIPRDHAV 770 Query: 763 LLAREWHVAVLDEAQTIKNSNTATTRRLQGIRARHRFCLTGTPMENHLGELWSIMSFANP 822 L A+EWH+ +LDEAQ IKN + TTR L GIRARHRFCLTGTP+EN L E+WS+ +FA P Sbjct: 771 LTAQEWHILLLDEAQAIKNPDAQTTRLLHGIRARHRFCLTGTPLENSLAEVWSLFAFACP 830 Query: 823 GYLGDRATFVRDWRTPIEKRADLGRARVLTHRIKPFLLRRTKQEVAAELPPKSEFTEGVV 882 G LGDR F R WR PIEK+ D R R+L R+KPFLLRRTK EVAAELPPK+E E V Sbjct: 831 GLLGDRRHFTRAWRMPIEKQGDRERGRLLARRLKPFLLRRTKDEVAAELPPKTEIVERVD 890 Query: 883 LEGSQRELYDAIRLSTSEKVRKAIRERGLAKSHIVVLEALLRMRQACCDPALLNLGDGVQ 942 L QR+LY++IRL+ +VR AI E+G A+S IV+L+ALL++RQACCDP LL L + Sbjct: 891 LAAGQRDLYESIRLAMHARVRAAIAEKGFARSRIVILDALLKLRQACCDPRLLKLAPPPK 950 Query: 943 RPSAKLDRLMEMVEELLSEKRKIIVFSQFTSMLALIRKRCDALAIRYSVLTGETKDRRSA 1002 SAKLDRL E++E L++E R+++VFSQFTSML LI+ R LTG ++DR Sbjct: 951 AGSAKLDRLDELLESLIAEGRRVLVFSQFTSMLDLIKPRLTLAKTPCLELTGRSRDRAEV 1010 Query: 1003 IDGFQNGASDLFLISLKAGGVGLNLTAADTVIIFDPWWNPAVEEQAIDRAHRIGQDKAVF 1062 + F+ G + +FLISLKAGG GLNL AADTVI++DPWWNPAVE QAIDRAHRIGQDK VF Sbjct: 1011 VRRFEAGEAPVFLISLKAGGTGLNLVAADTVILYDPWWNPAVEAQAIDRAHRIGQDKPVF 1070 Query: 1063 VYRLVAAGTIEEKMDELKARKRALADSIFDSQGRIGAALTEEDVQKLFVD 1112 V++LVA+ TIEEKM LK RK ALADS+FD G +A+T ED+ L D Sbjct: 1071 VHKLVASRTIEEKMGVLKERKGALADSLFDHDGAPTSAMTAEDLDLLLGD 1120 >ref|YP_003329341.1| putative helicase [Sinorhizobium meliloti] gb|ABA56014.1| putative helicase [Sinorhizobium meliloti] Length = 1126 Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/1144 (45%), Positives = 674/1144 (58%), Gaps = 63/1144 (5%) Query: 10 RLKQKDILGFFSRSAVDKAFAYRAQGRVSGLEVSEDLTHVQARVSGTERKPYRVDIALEF 69 + + DI+G +A AY+ QGRV E +D + ++V G+ KPYR I ++ Sbjct: 2 KYSENDIIGAVGVNAFSAGRAYQRQGRVIAFEWGDD-GDITSQVRGSSPKPYRQRIFIDT 60 Query: 70 DGDRLVDLDGDCSCPMAVNCKHVAATLFEALRSPAQAAGAVSQQPQGPAGNGRARPEAAV 129 + V ++G+CSCP+A +CKHVAA+L L A+ A + GP GN A Sbjct: 61 NRKGRVAVEGNCSCPVAFSCKHVAASLLHGLIRVAEPASFPTLTAPGPMGNSVAPGTQVQ 120 Query: 130 LPYQ----IAEWIETV----GRSVRDTDYPPDVTQRLLYCLQPGVSGSGIPCMDVSLVSV 181 P +A+W+ + +S+R + P QRL+Y L P + + +P + + + S Sbjct: 121 TPLSLSSPVADWLNRLRQADAKSLRGAENLP---QRLIYVLSPERTSTAMPRLRLEIRSG 177 Query: 182 KILKTGELGSKVSQPSFSEFSVDRAPKYYLGSDIDILTRLSSEFRSGYLFGRRAYS---- 237 ++LK G + S S + K+ +D IL ++S RS A + Sbjct: 178 RVLKDGTMSPTSSAYSLDNWHSRSEAKFLRDADRKILQVITSIPRSAVHGSNYALTTERG 237 Query: 238 AEVLKWIVATGRAFWRDHSGAPLRWSEARDGRIEWRQVSKDGIGPLLIVEGAT------T 291 AEVL I+ATGRA W G L A GRI+W + L +E + Sbjct: 238 AEVLDQILATGRARWMTIDGVDLSQGAAISGRIQWEPGKGGSLRAALRLEDPSQAEKRVC 297 Query: 292 LNAEPPVYVDEAAGLIGPIRLNLPGRLSSRLLLAPAIPHAHVAQVAQHL---GQKLPGLD 348 LNA PPVYVD AAG++G I L + +L P IP A V VA HL G +L Sbjct: 298 LNAMPPVYVDAAAGVVGRIETALAPMVVYEMLDGPDIPAAQVPLVAAHLRASGARLATTA 357 Query: 349 PGWLPEPPAAAVKINVDP-EPVLRLMLGRK----MTHAYYYGGDRTPDRVPVARVSFRYG 403 P P A V+I P +PVL+LM + Y YG + V +ARV+F YG Sbjct: 358 P-----PQLAEVQIIKGPFQPVLQLMTVQMPLPYRPGLYTYG---QTEAVGIARVAFCYG 409 Query: 404 PVEIEQSESAHRVESFSDGSIHVVTRRKAKEKEMAARLTSLGLVDARSAFPLLDAV---- 459 + +E+A + DG V R K +++A L L L + A + D V Sbjct: 410 GWAVVATETAA-IALHMDGLTPVEVHRNPKAEKVA--LNQLRLANFLPAPRVRDGVPAVN 466 Query: 460 HTKDLTFAQPAEWLDFLNVEAAGLQAAGFEIRIDDDFPYRLATSSGVFDADFESSGIDWF 519 H L + W D L + L+ G+ I I DFP RL G F+A + SG+DWF Sbjct: 467 HKDFLPDEGESNWYDALYHDIPDLEQHGWRIEIAADFPCRLLRGDGAFEARLQGSGLDWF 526 Query: 520 ELALGIEIDGERRDLAPLLAALLSQPGFSPETVKQLADDGDSVYLPLADGRYLAVAADRF 579 E LG+ + GER DL L LLS PET+ L DD L G+ LAV R Sbjct: 527 EFDLGVIVGGERLDLIGPLIRLLSM--IQPETLDLLDDDDPLFLP-LQHGQVLAVPVGRI 583 Query: 580 LPIVLALHTL----GEAFVDRSGKIRLSRAQTVPLLGLEADH---FVFRGAENLRRMAGL 632 LP++ L L GE D G +RLS L LEA +++G E +R + Sbjct: 584 LPLIRTLFDLFNLTGEPGAD--GSLRLSSLDAASLADLEAAAGAGVLWQGGEGVRALGQK 641 Query: 633 LSARG-LPCPVLPSDFNAALRPYQTQGVAWLDLLRESGLGGVLADDMGLGKTVQILALLA 691 L G +P LP F+A LRPYQ +G+AWL L+++GLGG+L+DDMGLGKTVQ L L+A Sbjct: 642 LRDHGGIPDVELPPWFSATLRPYQARGLAWLAFLKDAGLGGILSDDMGLGKTVQALGLIA 701 Query: 692 LEKARGHLTDPAIVIAPTSLMTNWFNEARKFTPGLRVLVLHGPDRRQSFEAIADHDLVLT 751 +EKA G L+ PA+VIAPTSLM NW EA KF P L +LVL G DR+Q F+++ DLVLT Sbjct: 702 IEKAAGRLSGPALVIAPTSLMVNWATEAEKFAPDLSILVLQGSDRKQRFDSLDTVDLVLT 761 Query: 752 TYPLIARDHEVLLAREWHVAVLDEAQTIKNSNTATTRRLQGIRARHRFCLTGTPMENHLG 811 TYPL+ARD +L R+W++ LDEAQ IKN+N TT+ + +++ HRFCLTGTP+ENHLG Sbjct: 762 TYPLLARDQAILAERDWYMIFLDEAQVIKNANATTTKLVHALKSPHRFCLTGTPLENHLG 821 Query: 812 ELWSIMSFANPGYLGDRATFVRDWRTPIEKRADLGRARVLTHRIKPFLLRRTKQEVAAEL 871 E+WS+ F PG+LGD TF R+WRTPIEK+ D RAR+L RIKPFLLRRTK+EVA++L Sbjct: 822 EVWSLFHFIAPGFLGDLKTFTRNWRTPIEKKGDTARARLLAGRIKPFLLRRTKEEVASDL 881 Query: 872 PPKSEFTEGVVLEGSQRELYDAIRLSTSEKVRKAIRERGLAKSHIVVLEALLRMRQACCD 931 PPK+ TE V QR +Y++IRL+ +V+ AI E+GLA+SHIV+L+ALL++RQACCD Sbjct: 882 PPKTVITERVEFTSGQRTIYESIRLAMHTRVQAAIAEKGLARSHIVILDALLKLRQACCD 941 Query: 932 PALLNLGD-----GVQRPSAKLDRLMEMVEELLSEKRKIIVFSQFTSMLALIRKRCDALA 986 P LL L D VQ SAKLDRLME+V EL E RK+IVFSQFTSML LIR+R D Sbjct: 942 PRLLKLTDTKKPSSVQAESAKLDRLMELVGELADEGRKVIVFSQFTSMLDLIRRRLDDAD 1001 Query: 987 IRYSVLTGETKDRRSAIDGFQNGASDLFLISLKAGGVGLNLTAADTVIIFDPWWNPAVEE 1046 I Y++LTG+T DR + ++ FQ+G +FLISLKAGGVGLNLTAADTVI++DPWWNPAVEE Sbjct: 1002 IAYALLTGDTVDRGTQVESFQHGTMPVFLISLKAGGVGLNLTAADTVILYDPWWNPAVEE 1061 Query: 1047 QAIDRAHRIGQDKAVFVYRLVAAGTIEEKMDELKARKRALADSIFDSQGRIGAALTEEDV 1106 QAIDRAHRIGQDK VFVYRLVAA TIEEKMD LK +KRALA S+FD G+ A+TE D Sbjct: 1062 QAIDRAHRIGQDKPVFVYRLVAADTIEEKMDVLKDKKRALAASLFDHDGQPTLAMTEADF 1121 Query: 1107 QKLF 1110 L Sbjct: 1122 DLLL 1125 >ref|YP_438039.1| SNF2 family DNA/RNA helicase [Hahella chejuensis KCTC 2396] gb|ABC33614.1| Superfamily II DNA/RNA helicase, SNF2 family [Hahella chejuensis KCTC 2396] Length = 1106 Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/1118 (40%), Positives = 645/1118 (57%), Gaps = 36/1118 (3%) Query: 11 LKQKDILGFFSRSAVDKAFAYRAQGRVSGLEVSEDLTHVQARVSGTERKPYRVDIALEFD 70 +K+ I + ++ Y Q RV+ +E ED H A V G+ Y+V + LE + Sbjct: 3 VKESLIAKELGHTYFERGVKYFKQKRVTVVEYGED--HASATVRGSGDSAYQVLVTLE-N 59 Query: 71 GDRLVDLDGDCSCPMAVNCKHVAATLFEALRSPAQAAGAVSQQPQGPAGNGRARPEAAVL 130 G + ++G+CSCP+ NCKHVAATL AA ++ P+ + P+ L Sbjct: 60 GAYGLRIEGECSCPIGYNCKHVAATLLAVNERSPVAAQKDTRSDHIPSHH----PDE-TL 114 Query: 131 PYQIAEWIETVGRSVRDTDYPPDVTQRLLYCLQPGVSGSGIPCMDVSLVSVKILKTGELG 190 + + W++ + + + P TQ + L +G C++V + +ILK+G Sbjct: 115 DHHVRRWLDQLVDTTTEKATPDSATQVSVLFLLTRNQMNGNVCVNV--IQARILKSGAYS 172 Query: 191 SKVSQPSFSE-FSVDRAPKYYLGSDIDILTRLSSEFRSGYLFGRRAYSAEVLKWIVATGR 249 ++ + + S F+ + + +D+ I RL L AE L+ I+AT R Sbjct: 173 TRTQRYNISAAFNQSKPAAFLTKADLAIFKRLLWSQWGSDLPLTEESGAEALQRILATER 232 Query: 250 AFWRDHSGAPLRWSEARDGRIEWRQVSKDGIGPLLIVEGATTLNAEPPVY-VDEAAGLIG 308 A+W G L EWR V ++G L +V + A P+Y ++ G G Sbjct: 233 AYWETPQGPKLFKGAPAQAEFEWR-VDREGGQTLEMVPSHLIMVATDPIYYINTHTGECG 291 Query: 309 PIRLNLPGRLSSRLLLAPAIPHAHVAQVAQHLGQKLPGLDPGWLPEPPAAAVKINVDPEP 368 + LP + L AP + QV L Q+LPG LP+P AV+ + +P Sbjct: 292 QLHSELPPSMLMTLNRAPRLSPVQAGQVRSLLEQRLPG---ARLPKPKEIAVEKDTKVKP 348 Query: 369 VLRLMLGRKM-THAYYYGGDRTPDRVPVARVSFRYGPVEIEQSESAHRVESFSDGSIHVV 427 + L LG + A Y+ + +P AR+ F Y + + +V + D + ++ Sbjct: 349 QVHLTLGAASPSQAGYFPYRTSQADIPYARLEFSYRDIRVSYDSDIQQVTTVKDNTHLII 408 Query: 428 TRRKAKEKEMAARLTSLGL--VDARSAFPLLDAVHTKDLTFAQPAEWLDFLNVEAAGLQA 485 R E+ +L +L + ++ +PL+D H DL+F EW F L+ Sbjct: 409 PRDFLVEETALRKLRTLDMRPLNTIETYPLVDEAHQMDLSFPSFGEWHGFAQYGIPLLEK 468 Query: 486 AGFEIRIDDDFPYRLATSSG---VFDADFESSGIDWFELALGIEIDGERRDLAPLLAALL 542 G+ I I++DFP++ + + + + S DWF+ LG+E+DGER +L P+L L+ Sbjct: 469 QGWHITIEEDFPFQYINTDVEELSWYSSLDESDSDWFDFDLGVEVDGERINLLPVLCNLI 528 Query: 543 SQPGFSPET--VKQLAD-DGDS-VYLPLADGRYLAVAADRFLPIVLALHTLGEAFVDRSG 598 +PE ++ LAD GDS V L +A GR++ + +R ++ +L L + + Sbjct: 529 KD---APEEWELQTLADYPGDSDVLLQVAPGRWIKLDVERVRNLLGSLIELYDHDPLVND 585 Query: 599 KIRLSRAQTVPLLGLE----ADHFVFRGAENLRRMAGLLSARGLPCPVLPSD-FNAALRP 653 K RL R Q LL L + + GA+ L R+ L + V P D FNA LR Sbjct: 586 KFRLKRGQVGQLLALNEAMASVSLRWLGADKLTRLIVRLKQQEQMSHVFPPDWFNATLRD 645 Query: 654 YQTQGVAWLDLLRESGLGGVLADDMGLGKTVQILALLALEKARGHLTDPAIVIAPTSLMT 713 YQ +G+ WL LRE +GG+LADDMGLGKT+Q LALL++EKA+G + P +++APTSLM+ Sbjct: 646 YQQEGLNWLGFLREIEMGGILADDMGLGKTIQTLALLSVEKAQGRMDRPCLIVAPTSLMS 705 Query: 714 NWFNEARKFTPGLRVLVLHGPDRRQSFEAIADHDLVLTTYPLIARDHEVLLAREWHVAVL 773 NW EA KF PGL+VLVLHG R + FE IAD+DLVLTTYPL+ RD E LL +++H +L Sbjct: 706 NWRKEAEKFAPGLKVLVLHGSQRAERFERIADNDLVLTTYPLLPRDSEYLLKQDYHYLIL 765 Query: 774 DEAQTIKNSNTATTRRLQGIRARHRFCLTGTPMENHLGELWSIMSFANPGYLGDRATFVR 833 DEAQTIKN T+ + + ARHR CLTGTPMENHLGELWS+ +F PG LGD F Sbjct: 766 DEAQTIKNPKAQATQLVHRLEARHRLCLTGTPMENHLGELWSLFNFLTPGLLGDDRKFKT 825 Query: 834 DWRTPIEKRADLGRARVLTHRIKPFLLRRTKQEVAAELPPKSEFTEGVVLEGSQRELYDA 893 +RTPIEK+ DL R R+L+ RIKPF+LRRTKQEVA ELP K+E V+LEG QR+LY++ Sbjct: 826 LFRTPIEKQGDLERQRLLSRRIKPFMLRRTKQEVATELPEKTEIQRTVLLEGKQRDLYES 885 Query: 894 IRLSTSEKVRKAIRERGLAKSHIVVLEALLRMRQACCDPALLNLGDGVQ-RPSAKLDRLM 952 IR++ +K+R AI ++G+ +SHI +L+ALL++RQ CCDP+LL L + + SAKLD LM Sbjct: 886 IRVAMDKKIRDAIAKKGVKRSHIEILDALLKLRQVCCDPSLLKLDSARKVKSSAKLDTLM 945 Query: 953 EMVEELLSEKRKIIVFSQFTSMLALIRKRCDALAIRYSVLTGETKDRRSAIDGFQNGASD 1012 M+ LL E RKI++FSQFTSML LI + D I Y LTG TKDR + ++ FQNG Sbjct: 946 SMLPSLLEEGRKILLFSQFTSMLGLIEAQLDKAGIEYVKLTGATKDRDTPVNRFQNGEVS 1005 Query: 1013 LFLISLKAGGVGLNLTAADTVIIFDPWWNPAVEEQAIDRAHRIGQDKAVFVYRLVAAGTI 1072 LFLISLKAGGVGLNLTAADTVI +DPWWNPAVE QA DRA+RIGQDK VFVY+L+ GT+ Sbjct: 1006 LFLISLKAGGVGLNLTAADTVIHYDPWWNPAVENQATDRAYRIGQDKPVFVYKLITEGTV 1065 Query: 1073 EEKMDELKARKRALADSIFDSQGRIGAALTEEDVQKLF 1110 EEK+ EL+ +K+ALAD++ + EE+++KLF Sbjct: 1066 EEKIVELQKQKQALADNLLADKAE-KFTFDEEELRKLF 1102 >ref|ZP_01452073.1| Superfamily II DNA/RNA helicase, SNF2 family protein [Mariprofundus ferrooxydans PV-1] gb|EAU55034.1| Superfamily II DNA/RNA helicase, SNF2 family protein [Mariprofundus ferrooxydans PV-1] Length = 1095 Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/1139 (39%), Positives = 614/1139 (53%), Gaps = 75/1139 (6%) Query: 1 MSDLPNLSERLKQKDILGFFSRSAVDKAFAYRAQGRVSGLEVSEDLTHVQARVSGTERKP 60 M++ P +SE+ Q+ + R+ + AY G V L + + L + A V G E P Sbjct: 1 MTEWPRISEKRIQQ----WLGRACSTRGKAYYRLGHVLDLAMDDGL--LAASVRGKESDP 54 Query: 61 YRVDIALEFDGDRLVDLDGDCSCPMAVNCKHVAATLFEALRSPAQAAGAVSQQPQGPAGN 120 Y++ I + L CSCP+ +CKHVAA L+ + + + Sbjct: 55 YKLHIRFTSKAE----LVSHCSCPVGADCKHVAAALYAWMNEQDEV-------------D 97 Query: 121 GRARPEAAV--LPYQIAEWIETV-----GRSVRDTDYPPDVTQRLLYCLQPGVSGSGIPC 173 A+ EAA +P+ +W+ + G+ VRD ++P V QR+LY LQP +G Sbjct: 98 AEAKAEAATGPVPFAFGQWLGALDQVRDGQPVRD-EFPDSVKQRMLYILQP----NGERN 152 Query: 174 MDVSLVSVKILKTGELGSKVSQPSFSEFSVDRAPKYYLGSDIDILTRLSSEFRSGYLFGR 233 + + ++ ++LK G G K S S P+Y L SD IL ++ + G L G Sbjct: 153 VRMQCLTARLLKDGGYG-KASVYSPVNILSHHTPQYLLASDERILREVAMDRSLGSLHGY 211 Query: 234 RAYSAE---VLKWIVATGRAFWRDHSGAPLRWSEARDGRIEWRQVSK-DGIGPLLIVEGA 289 R + +LK IVA+GR W+ ++ E R G W+ S+ D L + Sbjct: 212 RLQGEDGLRILKRIVASGRCHWQSKDAPAIKRGEKRAGEWRWQLNSRGDQYLTLHMPADE 271 Query: 290 TTLNAEPPVYVDEAAGLIGPIRLNLPGRLSSRLLLAPAIPHAHVAQVAQHLGQKLPGLDP 349 + PP ++D + PI P ++ LL PA+ +V + + LP P Sbjct: 272 IVIPTSPPWFLDVHKAICAPIDSAQPATVAEILLNMPAVELDCSDEVLAAVRKHLP---P 328 Query: 350 GWLPEPPA-AAVKINVDPEPVLRLMLGRKMTHAYYYGGDRTPDRVPVARVSFRYGPVEIE 408 G +P P A + V P P L+L R YY R P+ VA + Y I Sbjct: 329 G-VPAPLALTHERRQVTPIPRLQLTTIRPQGRGYY----RKPEAFHVASLCMDYDGKRIT 383 Query: 409 QSESAHRVESFSDGSIHVVTRRKAKEKEMAARLTSLGLVDARSAFPLLDAVHTKDLTFAQ 468 S + S + T A L + GL R + AV + F Sbjct: 384 HSSRTEMIRSIRGDRVIDYTYDAAAHARAVDALCASGLFPLREQ-SMTPAVEVDEHYFIL 442 Query: 469 PA--EWLDFLNVEAAGLQAAGFEIRIDDDFPYRLATSSGVFDADFESSGIDW-------F 519 P +W D++ E A L+ GF I + DDFP+R+ T+ ESSG+ F Sbjct: 443 PDDDQWPDWMLYECADLKEQGFVIEVMDDFPFRMETAHSWHLQLGESSGVSSALMGHASF 502 Query: 520 ELALGIEIDGERRDLAPLLAALL-SQPGFSPETVKQLADDGDSVYLPLADGRYLAVAADR 578 L DGE DL LA + +QP E + S+ LP+ADGR+LA AD Sbjct: 503 TATLD---DGEEVDLIDALARWVGNQPKLLSEASLAAMREQQSIALPMADGRFLAAPADA 559 Query: 579 FLPIVLALHTLGEAFVDRSGKIRLSRAQTVPLLGLEADHFVFRGAENLRRMAGLLSARGL 638 I LH + + F SG + +L LE +HF GA + A L R L Sbjct: 560 IANI---LHYMLDVFA--SGGAAEATLSVPQMLALE-EHFEGGGAVQVSSTAWLQQMRQL 613 Query: 639 ------PCPVLPSDFNAALRPYQTQGVAWLDLLRESGLGGVLADDMGLGKTVQILALLAL 692 P VLP+ A LR YQ +GV W+ +LR+ L G+LADDMGLGKTVQ L + + Sbjct: 614 ADIARVPAAVLPAGLQATLRDYQHEGVNWMQMLRQMQLAGILADDMGLGKTVQALTHILI 673 Query: 693 EKARGHLTDPAIVIAPTSLMTNWFNEARKFTPGLRVLVLHGPDRRQSFEAIADHDLVLTT 752 EK G L P +VIAPTSLM NW EA+KFTP L VLVLHGP+R + F IAD D+VLTT Sbjct: 674 EKEAGRLQQPTLVIAPTSLMHNWRREAKKFTPDLSVLVLHGPNRMERFAEIADFDIVLTT 733 Query: 753 YPLIARDHEVLLAREWHVAVLDEAQTIKNSNTATTRRLQGIRARHRFCLTGTPMENHLGE 812 YPL+ RD EVL ++WH+ +LDEAQ IKN+++ +R++ + A H+ C+TGTPMENHLGE Sbjct: 734 YPLLVRDFEVLEQQQWHLLILDEAQYIKNASSKAAQRVRRLMASHKLCITGTPMENHLGE 793 Query: 813 LWSIMSFANPGYLGDRATFVRDWRTPIEKRADLGRARVLTHRIKPFLLRRTKQEVAAELP 872 LW+ F PGYL D+ F + +R PIE + D R L RI+PFLLRR K +VA ELP Sbjct: 794 LWAQFDFLLPGYLHDKRQFAKVFRKPIEIQGDQARQNALNMRIRPFLLRRGKDQVALELP 853 Query: 873 PKSEFTEGVVLEGSQRELYDAIRLSTSEKVRKAIRERGLAKSHIVVLEALLRMRQACCDP 932 K+E V +EG+QRELY+++RL+ ++VR A+ G+A+S IVVL+AL++MRQ CCDP Sbjct: 854 DKTEIIRSVDMEGAQRELYESVRLAMQKRVRDAVASMGVAQSQIVVLDALMKMRQVCCDP 913 Query: 933 ALLNLGDGVQRPSAKLDRLMEMVEELLSEKRKIIVFSQFTSMLALIRKRCDALAIRYSVL 992 L++ G SAKL LMEM+ E++ E R++++FSQFTSML LI A I Y L Sbjct: 914 RLVSGLQGALPASAKLTMLMEMLPEMIEEGRRVLLFSQFTSMLKLIEAEVTAAGIDYVKL 973 Query: 993 TGETKDRRSAIDGFQNGASDLFLISLKAGGVGLNLTAADTVIIFDPWWNPAVEEQAIDRA 1052 TG+T+DR + ++ FQNG LFLISLKAGGVGLNLTAADTVI +DPWWNPAVE QA DRA Sbjct: 974 TGQTRDRETPVERFQNGEVPLFLISLKAGGVGLNLTAADTVIHYDPWWNPAVEAQATDRA 1033 Query: 1053 HRIGQDKAVFVYRLVAAGTIEEKMDELKARKRALADSIFDSQGRIGAALTEEDVQKLFV 1111 HRIGQDKAVFVY+L+ GT+EE++ E++ RKR LADSI T D++ LF Sbjct: 1034 HRIGQDKAVFVYKLLTEGTVEERILEMQDRKRELADSIHQQGAGKVPLWTPADLESLFT 1092