BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0137.0025.p         (75 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001971663.1| putative LuxR family transcriptional regulat...   103   1e-20
ref|ZP_05133878.1| transcriptional regulator, LuxR family [Steno...   101   4e-20
ref|YP_002027963.1| LuxR family transcriptional regulator [Steno...    99   2e-19
ref|YP_347979.1| LuxR family transcriptional regulator [Pseudomo...    99   3e-19
ref|ZP_08143015.1| LuxR family transcriptional regulator [Pseudo...    96   2e-18

>ref|YP_001971663.1| putative LuxR family transcriptional regulator [Stenotrophomonas
           maltophilia K279a]
 emb|CAQ45360.1| putative LuxR family transcriptional regulatory protein
           [Stenotrophomonas maltophilia K279a]
          Length = 234

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 59/66 (89%)

Query: 10  ASSLSPREREVLRWISAGRRQADIAASLGLSERTVENHLRHARLRLGVATTAQAIRLAIR 69
            S+LS REREVLRW++AGRRQA+IAA+LGLS RTVENHLRHAR RLGVATTAQA+R A R
Sbjct: 169 GSALSTREREVLRWVAAGRRQAEIAATLGLSTRTVENHLRHARQRLGVATTAQAVRAANR 228

Query: 70  SGEIED 75
            GEIED
Sbjct: 229 RGEIED 234


>ref|ZP_05133878.1| transcriptional regulator, LuxR family [Stenotrophomonas sp. SKA14]
 gb|EED37939.1| transcriptional regulator, LuxR family [Stenotrophomonas sp. SKA14]
          Length = 230

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/66 (78%), Positives = 57/66 (86%)

Query: 10  ASSLSPREREVLRWISAGRRQADIAASLGLSERTVENHLRHARLRLGVATTAQAIRLAIR 69
            S LS REREVLRW++AGRRQA+IA +LGLS RTVENHLRHAR RLGVATTAQA+R A R
Sbjct: 165 GSLLSTREREVLRWVAAGRRQAEIATTLGLSARTVENHLRHARQRLGVATTAQAVRAATR 224

Query: 70  SGEIED 75
            GEIED
Sbjct: 225 RGEIED 230


>ref|YP_002027963.1| LuxR family transcriptional regulator [Stenotrophomonas maltophilia
           R551-3]
 gb|ACF51280.1| transcriptional regulator, LuxR family [Stenotrophomonas
           maltophilia R551-3]
          Length = 234

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/72 (76%), Positives = 60/72 (83%), Gaps = 2/72 (2%)

Query: 4   AHEPNGASSLSPREREVLRWISAGRRQADIAASLGLSERTVENHLRHARLRLGVATTAQA 63
           A  P GA  LS REREVLRW++AGRRQA+IAA+LGLS RTVENHLR AR RLGVATTAQA
Sbjct: 165 AELPVGA--LSAREREVLRWVAAGRRQAEIAATLGLSARTVENHLRRARQRLGVATTAQA 222

Query: 64  IRLAIRSGEIED 75
           +R A R GEIED
Sbjct: 223 VRAASRRGEIED 234


>ref|YP_347979.1| LuxR family transcriptional regulator [Pseudomonas fluorescens
           Pf0-1]
 gb|ABA73990.1| putative transcriptional regulator, LuxR family [Pseudomonas
           fluorescens Pf0-1]
          Length = 239

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 52/73 (71%), Positives = 59/73 (80%)

Query: 2   MEAHEPNGASSLSPREREVLRWISAGRRQADIAASLGLSERTVENHLRHARLRLGVATTA 61
           +EA     A  LS REREVL W++AGRRQADIAA+LGLS RTVENHLR AR  LGVATTA
Sbjct: 166 LEAPLDETAGKLSTREREVLAWVAAGRRQADIAATLGLSGRTVENHLRSARRHLGVATTA 225

Query: 62  QAIRLAIRSGEIE 74
           QAI++AIR GEI+
Sbjct: 226 QAIKIAIRKGEIK 238


>ref|ZP_08143015.1| LuxR family transcriptional regulator [Pseudomonas sp. TJI-51]
 gb|EGB95694.1| LuxR family transcriptional regulator [Pseudomonas sp. TJI-51]
          Length = 242

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/64 (76%), Positives = 57/64 (89%)

Query: 10  ASSLSPREREVLRWISAGRRQADIAASLGLSERTVENHLRHARLRLGVATTAQAIRLAIR 69
           A+ LS REREVLRW +AG RQADIAA+LGLSERTVENHLR AR RLGVATTAQAI++A+ 
Sbjct: 174 ATQLSAREREVLRWTAAGSRQADIAATLGLSERTVENHLRAARRRLGVATTAQAIKIALH 233

Query: 70  SGEI 73
           +GE+
Sbjct: 234 NGEL 237