BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0137.0005.p (196 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08629481.1| hypothetical protein CSIRO_2570 [Bradyrhizobi... 127 6e-28 ref|NP_770676.1| hypothetical protein bll4036 [Bradyrhizobium ja... 108 3e-22 ref|YP_002289375.1| hypothetical protein OCAR_6397 [Oligotropha ... 106 2e-21 ref|ZP_07026868.1| conserved hypothetical protein [Afipia sp. 1N... 102 4e-20 ref|YP_004108353.1| hypothetical protein Rpdx1_2011 [Rhodopseudo... 77 2e-12 >ref|ZP_08629481.1| hypothetical protein CSIRO_2570 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07974.1| hypothetical protein CSIRO_2570 [Bradyrhizobiaceae bacterium SG-6C] Length = 200 Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 72/179 (40%), Positives = 101/179 (56%), Gaps = 7/179 (3%) Query: 1 VVRSVTQRVLLNAWLRALRIPDALPLLGDFHTDGTADERADMMGFDVVGSGEAARFLITQ 60 +V+S+ QR LN WLR + LP ++ + A+E AD++ + V G+G+ RF I Sbjct: 10 IVKSIKQRDFLNVWLRLYARHERLPGFDEYRPERFAEEAADLVTYTVHGTGQHPRFRIES 69 Query: 61 EGARLTTAYGNEHVEPRLRTNRYLDDAIGPERYAGVILSYRACVARKRPTYTVATVADAD 120 EG R++ AYG RYLD+ +G + V+ Y CV R+ P YT++ V D Sbjct: 70 EGTRMSNAYGATG------QGRYLDEYVGAKLEPIVVPIYLECVRRRLPVYTISKVNDLY 123 Query: 121 GKEVSYERLLLPFGRGDAVEHIIGSYKAISIEGGFRLHNLMGVAAKSAPVVTERAVIDR 179 G++V YERLLLPF G V HI+ S K IS +G F + NLM A P+ R+VIDR Sbjct: 124 GRKVDYERLLLPFSDGAGVTHILASLKTISDDGSFEIRNLMR-ANDVLPIYQLRSVIDR 181 >ref|NP_770676.1| hypothetical protein bll4036 [Bradyrhizobium japonicum USDA 110] dbj|BAC49301.1| bll4036 [Bradyrhizobium japonicum USDA 110] Length = 264 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 71/179 (39%), Positives = 93/179 (51%), Gaps = 9/179 (5%) Query: 2 VRSVTQRVLLNAWLRALRIPDALPLLGDFHTDGTADERADMMGFDVVGSGEAARFLITQE 61 V+S+ QR LLN WLR P + ++ +E +D++ + V S R +I E Sbjct: 60 VKSIRQRDLLNTWLRLYARQQIAPAIWEYQPARLEEELSDLIYYTVDASTPVPRLIIQSE 119 Query: 62 GARLTTAYGNEHVEPRLRTNRYLDDAIGPERYAGVILSYRACVARKRPTYTVATVADADG 121 G R++ AYG+ LD+ IGP V+ Y CVAR P Y+VA V D G Sbjct: 120 GTRISRAYGHTG------KGVPLDEYIGPRLVPSVMPIYYECVARGLPVYSVADVDDIYG 173 Query: 122 KEVSYERLLLPFGRGDAVEHIIGSYKAISIEGGFRLHNLM-GVAAKSAPVVTERAVIDR 179 + V+YERLLLPF V HII S K +GGF + NLM G A P + RAVIDR Sbjct: 174 RIVAYERLLLPFLTDGKVCHIIASLKTFCEDGGFEIKNLMRGNDAPPRPKL--RAVIDR 230 >ref|YP_002289375.1| hypothetical protein OCAR_6397 [Oligotropha carboxidovorans OM5] ref|YP_004632605.1| hypothetical protein OCA5_c16500 [Oligotropha carboxidovorans OM5] gb|ACI93510.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5] gb|AEI02788.1| hypothetical protein OCA4_c16500 [Oligotropha carboxidovorans OM4] gb|AEI06364.1| hypothetical protein OCA5_c16500 [Oligotropha carboxidovorans OM5] Length = 210 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 95/197 (48%), Gaps = 11/197 (5%) Query: 1 VVRSVTQRVLLNAWLRALRIPDALPLLGDFHTDGTADERADMMGFDVVGSGEAARFLITQ 60 V+R++ QR LLN WL + P DF + E + + V F+I Sbjct: 22 VIRAIQQRDLLNKWLSLYTLHGRAPPFDDFKMECCDGECDSAVYYTVEIENGHPSFIIDS 81 Query: 61 EGARLTTAYGNEHVEPRLRTNRYLDDAIGPERYAGVILSYRACVARKRPTYTVATVADAD 120 G RL AYG R L + +G + ++ Y C RK P YTV+ V D Sbjct: 82 VGTRLAKAYGATG------GGRELGNYLGAKLARVILPLYEECFRRKLPVYTVSRVQDRK 135 Query: 121 GKEVSYERLLLPFGRGDAVEHIIGSYKAISIEGGFRLHNLMGVAAKSAPVVTERAVIDRR 180 G+EV +ERLLLPF G+ + ++GS++ IS+EG F L +M + P+ RAVID+ Sbjct: 136 GREVDFERLLLPFSNGERITRVVGSFETISLEGHFDLEKMM---HERMPIDVVRAVIDKN 192 Query: 181 --FVPTDRPVSHDSVEL 195 F P R + D +E Sbjct: 193 LYFKPPSRIAAQDKIEF 209 >ref|ZP_07026868.1| conserved hypothetical protein [Afipia sp. 1NLS2] gb|EFI51711.1| conserved hypothetical protein [Afipia sp. 1NLS2] Length = 210 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 94/197 (47%), Gaps = 11/197 (5%) Query: 1 VVRSVTQRVLLNAWLRALRIPDALPLLGDFHTDGTADERADMMGFDVVGSGEAARFLITQ 60 VVR++ QR LLN WL P +FH + + A + + V R +I Sbjct: 22 VVRAIQQRDLLNKWLSLYTPLQHAPPFEEFHLECNETDCASAVLYTVKVENGHQRIMIDS 81 Query: 61 EGARLTTAYGNEHVEPRLRTNRYLDDAIGPERYAGVILSYRACVARKRPTYTVATVADAD 120 G RL AYG + R L + +GP+ ++ Y C+ R P YTV+ + D D Sbjct: 82 GGTRLAKAYGATGI------GRELSEYLGPKLIPVIMPIYEECIRRGLPVYTVSRLHDRD 135 Query: 121 GKEVSYERLLLPFGRGDAVEHIIGSYKAISIEGGFRLHNLMGVAAKSAPVVTERAVIDRR 180 ++V ERLLLPF G + I S++ IS EG F ++ LM + P+ RAVID++ Sbjct: 136 KRKVDLERLLLPFSDGKRITRIFASFETISPEGHFDINQLM---RERLPIDVVRAVIDKK 192 Query: 181 --FVPTDRPVSHDSVEL 195 F P R D +E Sbjct: 193 LYFKPPPRISPRDKIEF 209 >ref|YP_004108353.1| hypothetical protein Rpdx1_2011 [Rhodopseudomonas palustris DX-1] gb|ADU43620.1| hypothetical protein Rpdx1_2011 [Rhodopseudomonas palustris DX-1] Length = 193 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 89/189 (47%), Gaps = 12/189 (6%) Query: 1 VVRSVTQRVLLNAWLRALRIPDALPLLGDFHTDGTADERADMMGFDVVGSGEAARFLITQ 60 VVR V R L++ W R RIPD P + F + + + + + VVG E R+ I Sbjct: 10 VVRHVPHRWLISQWARGGRIPD--PAMVPFAFEPASLDMSRSIVTRVVGLAEPRRYQILH 67 Query: 61 EGARLTTAYGNEHVEPRLRTNRYLDDAIGPERYAGVILSYRACVARKRPTYTVATVADAD 120 G+ L+ A G +EPR +LD+ + P ++ Y C ++P Y++++V+DA Sbjct: 68 YGSLLSAATG---LEPR---GLHLDEFLSPAARDHMLAQYELCRRSRKPVYSISSVSDAH 121 Query: 121 GKEVSYERLLLPF-GRGDAVEHIIGSYKAISIEGGFRLHNLMGVAAKSAP---VVTERAV 176 V YE+LLLPF G V I + IS EG F + AP VV V Sbjct: 122 DVPVDYEKLLLPFTNAGGEVHCIFTTSLLISTEGRFERDGIFANGDFPAPRSAVVYTINV 181 Query: 177 IDRRFVPTD 185 + VP+ Sbjct: 182 ARQNLVPSS 190