BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0136.0001.p (251 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766782.1| hypothetical protein bll0142 [Bradyrhizobium ja... 400 e-110 ref|ZP_08627567.1| hypothetical protein CSIRO_0629 [Bradyrhizobi... 353 1e-95 ref|YP_484178.1| hypothetical protein RPB_0556 [Rhodopseudomonas... 352 2e-95 ref|YP_004106518.1| hypothetical protein Rpdx1_0141 [Rhodopseudo... 347 1e-93 ref|YP_567414.1| hypothetical protein RPD_0273 [Rhodopseudomonas... 345 4e-93 >ref|NP_766782.1| hypothetical protein bll0142 [Bradyrhizobium japonicum USDA 110] dbj|BAC45407.1| bll0142 [Bradyrhizobium japonicum USDA 110] Length = 251 Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/251 (78%), Positives = 212/251 (84%), Gaps = 2/251 (0%) Query: 1 MAEYMRLRQICLVAPQLAPVIADISAIMGLDVCYRDGNVAKYGLENALLPVDTILLEVVA 60 MA Y+RLRQICLVAPQLAPVI+DI+ IMGL VCYRDGNVAKYGLENALLPVDTILLEVVA Sbjct: 3 MAPYVRLRQICLVAPQLAPVISDIADIMGLAVCYRDGNVAKYGLENALLPVDTILLEVVA 62 Query: 61 PFQPGPGTAAGRFIEKTGGRGGYMAIFACEDPDARGAKANAMGVRTANVITHAPYHGVQL 120 PF+ G T AGRFIEKTGGRGGYMAIF C DPD RG ANA+GVRTANVI HAPYHGVQL Sbjct: 63 PFKDG--TTAGRFIEKTGGRGGYMAIFCCNDPDERGRNANALGVRTANVIDHAPYHGVQL 120 Query: 121 HPRDCRAAFIEFNHTDGSDDILGPYPPAGPDWQKSIRKDTTLSLTEVEMQSPEPEGLAAH 180 HPRDCRAAFIEFNHT GSDDILGPYPPAGPDWQK IRKD T +LT VEMQSP+P GLA H Sbjct: 121 HPRDCRAAFIEFNHTKGSDDILGPYPPAGPDWQKFIRKDVTQALTAVEMQSPDPAGLAEH 180 Query: 181 WGRIIGIPADGPVVKLPNNTFRFVKGDSEIMSGLTFKVVDKAKVLEAAKARGCAVKGDEF 240 WG IIG+ ++LPN TFRFVKG SEIMS L F+V D A VL AA+A+G AV G+EF Sbjct: 181 WGGIIGVAPSDAELRLPNATFRFVKGPSEIMSALEFRVADVAGVLHAARAKGLAVAGNEF 240 Query: 241 LLSGVTFKLTA 251 LL GVTF+L A Sbjct: 241 LLGGVTFRLNA 251 >ref|ZP_08627567.1| hypothetical protein CSIRO_0629 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09821.1| hypothetical protein CSIRO_0629 [Bradyrhizobiaceae bacterium SG-6C] Length = 249 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 173/251 (68%), Positives = 199/251 (79%), Gaps = 2/251 (0%) Query: 1 MAEYMRLRQICLVAPQLAPVIADISAIMGLDVCYRDGNVAKYGLENALLPVDTILLEVVA 60 M R+RQ+CLVAP L PV+ DI+AIMGL VCYRD NVA+YGLENALLPVD ILLEVVA Sbjct: 1 MTGTTRMRQVCLVAPHLEPVVGDIAAIMGLSVCYRDPNVARYGLENALLPVDDILLEVVA 60 Query: 61 PFQPGPGTAAGRFIEKTGGRGGYMAIFACEDPDARGAKANAMGVRTANVITHAPYHGVQL 120 P Q G TAAGRFIEKTGGRGGYMAI +C DP R A+AMGVRT++VI PY GVQL Sbjct: 61 PLQDG--TAAGRFIEKTGGRGGYMAILSCADPRERQKTADAMGVRTSHVIDRPPYLGVQL 118 Query: 121 HPRDCRAAFIEFNHTDGSDDILGPYPPAGPDWQKSIRKDTTLSLTEVEMQSPEPEGLAAH 180 HPRDCRAAFIEFNHT SD++ GPYPPAGPDW ++IR + TL+LTEV + SP+P+GLAAH Sbjct: 119 HPRDCRAAFIEFNHTADSDNVRGPYPPAGPDWHRAIRDEVTLALTEVTLASPDPQGLAAH 178 Query: 181 WGRIIGIPADGPVVKLPNNTFRFVKGDSEIMSGLTFKVVDKAKVLEAAKARGCAVKGDEF 240 W RIIG+PA G + L N R VKG+SEIMSGLTF+V D A VL AA+ARG AV+GD F Sbjct: 179 WSRIIGVPATGADIGLVNCRIRVVKGESEIMSGLTFRVRDPAAVLRAAQARGHAVQGDTF 238 Query: 241 LLSGVTFKLTA 251 L GV F++TA Sbjct: 239 ALGGVDFRITA 249 >ref|YP_484178.1| hypothetical protein RPB_0556 [Rhodopseudomonas palustris HaA2] gb|ABD05267.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 254 Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 174/255 (68%), Positives = 200/255 (78%), Gaps = 7/255 (2%) Query: 1 MAEYMRLRQICLVAPQLAPVIADISAIMGLDVCYRDGNVAKYGLENALLPVDTILLEVVA 60 M ++RLRQICLVA + P + ++A+MGL VCYRD +V KYGLEN L+PVDT LLE+VA Sbjct: 1 MTPFLRLRQICLVADAIEPAASQLAAMMGLTVCYRDPHVGKYGLENLLIPVDTTLLEIVA 60 Query: 61 PFQPGPGTAAGRFIEKTGGRGGYMAIFACEDPDARGAKANAMGVRTANVITHAPYHGVQL 120 P QPG TAAGRF+EKTGGRGGYMAIF C+DPDARG A ++GVRTANVI HAPYHGVQL Sbjct: 61 PIQPG--TAAGRFLEKTGGRGGYMAIFCCDDPDARGRHAASLGVRTANVIDHAPYHGVQL 118 Query: 121 HPRDCRAAFIEFNHTDGSDDILGPYPPAGPDWQKSIRKDTTLSLTEVEMQSPEPEGLAAH 180 HPRDCRAAFIE NHT+GSD+I GPYPPAGPDW K+IR DTT +LT VEMQSP+P LAAH Sbjct: 119 HPRDCRAAFIELNHTEGSDNIRGPYPPAGPDWDKAIRTDTTQALTAVEMQSPDPADLAAH 178 Query: 181 WGRIIGIP----ADG-PVVKLPNNTFRFVKGDSEIMSGLTFKVVDKAKVLEAAKARGCAV 235 WGRI+ +P ADG ++LPN T RFV+G SE M LTFKV D KV EAAKA+G Sbjct: 179 WGRILELPVRKGADGVSELQLPNATLRFVQGGSEAMMALTFKVTDVDKVREAAKAQGVTC 238 Query: 236 KGDEFLLSGVTFKLT 250 D F L+GV FKLT Sbjct: 239 TADGFNLAGVNFKLT 253 >ref|YP_004106518.1| hypothetical protein Rpdx1_0141 [Rhodopseudomonas palustris DX-1] gb|ADU41785.1| hypothetical protein Rpdx1_0141 [Rhodopseudomonas palustris DX-1] Length = 254 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 168/255 (65%), Positives = 197/255 (77%), Gaps = 7/255 (2%) Query: 1 MAEYMRLRQICLVAPQLAPVIADISAIMGLDVCYRDGNVAKYGLENALLPVDTILLEVVA 60 MA ++RLRQICLV + P + I+AI+GL++CYRD +V KYGLEN LLPVDT LLE+VA Sbjct: 1 MAPFLRLRQICLVTEPIEPAASQIAAILGLNICYRDPHVGKYGLENVLLPVDTTLLEIVA 60 Query: 61 PFQPGPGTAAGRFIEKTGGRGGYMAIFACEDPDARGAKANAMGVRTANVITHAPYHGVQL 120 P QPG TAAGRF+EKTGGRGGYMAIF C+DPDARG A +GVRTANVI HAPYHGVQL Sbjct: 61 PTQPG--TAAGRFLEKTGGRGGYMAIFCCDDPDARGRHAATLGVRTANVIDHAPYHGVQL 118 Query: 121 HPRDCRAAFIEFNHTDGSDDILGPYPPAGPDWQKSIRKDTTLSLTEVEMQSPEPEGLAAH 180 HPRDCRAAFIE NHT+GSD+I GPYPPAGPDW +IR DTT +LT VEMQSP+P LA+H Sbjct: 119 HPRDCRAAFIELNHTEGSDNIRGPYPPAGPDWAAAIRTDTTQALTAVEMQSPDPADLASH 178 Query: 181 WGRIIGIPADGPV-----VKLPNNTFRFVKGDSEIMSGLTFKVVDKAKVLEAAKARGCAV 235 WGRI+ +P D ++LPN TFRFV+G SE M+ L FKV D KV AA+A+G Sbjct: 179 WGRILELPVDRDADSVAELRLPNATFRFVQGASETMTALKFKVADVNKVRAAAEAQGVGC 238 Query: 236 KGDEFLLSGVTFKLT 250 D F L+GV F+LT Sbjct: 239 TADGFNLAGVEFRLT 253 >ref|YP_567414.1| hypothetical protein RPD_0273 [Rhodopseudomonas palustris BisB5] gb|ABE37513.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 254 Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 166/255 (65%), Positives = 201/255 (78%), Gaps = 7/255 (2%) Query: 1 MAEYMRLRQICLVAPQLAPVIADISAIMGLDVCYRDGNVAKYGLENALLPVDTILLEVVA 60 MA ++RLRQICLVA L P + ++AIMGL+VCYRD +V KYGLEN LLPVD LLE+VA Sbjct: 1 MAPFLRLRQICLVADSLEPATSRLAAIMGLEVCYRDPHVGKYGLENVLLPVDATLLEIVA 60 Query: 61 PFQPGPGTAAGRFIEKTGGRGGYMAIFACEDPDARGAKANAMGVRTANVITHAPYHGVQL 120 P + G TAAGRF+EKTGG GGYMAIF C+DPDARG A +GVRTANVI HAPYHGVQL Sbjct: 61 PTRAG--TAAGRFLEKTGGHGGYMAIFCCDDPDARGRHAATLGVRTANVIDHAPYHGVQL 118 Query: 121 HPRDCRAAFIEFNHTDGSDDILGPYPPAGPDWQKSIRKDTTLSLTEVEMQSPEPEGLAAH 180 HPRDCRAAFIE NHT GSD++ GPYPPAGPDW K+IR + T +LT VE+QSP+P+ LAAH Sbjct: 119 HPRDCRAAFIELNHTAGSDNVRGPYPPAGPDWHKAIRTEVTQALTAVELQSPDPDDLAAH 178 Query: 181 WGRIIGIP----ADGPV-VKLPNNTFRFVKGDSEIMSGLTFKVVDKAKVLEAAKARGCAV 235 WGRI+ +P A+G +++PN T RFVKGDSE ++ LTFKV D K+ EAA+++G A Sbjct: 179 WGRILELPVTKGAEGVAELQVPNATLRFVKGDSEALTALTFKVADPTKIREAAQSQGVAT 238 Query: 236 KGDEFLLSGVTFKLT 250 GD F L+GV F+L+ Sbjct: 239 TGDGFTLAGVAFRLS 253