BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0135.0018.p (317 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004557108.1| beta-lactamase domain-containing protein [Si... 521 e-146 gb|AEG07827.1| beta-lactamase domain protein [Sinorhizobium meli... 521 e-146 ref|ZP_08530969.1| hypothetical protein AGRO_4981 [Agrobacterium... 515 e-144 ref|NP_356347.2| hypothetical protein Atu4307 [Agrobacterium tum... 515 e-144 ref|YP_004632492.1| metal-dependent hydrolase [Oligotropha carbo... 514 e-144 >ref|YP_004557108.1| beta-lactamase domain-containing protein [Sinorhizobium meliloti AK83] gb|AEG56228.1| beta-lactamase domain protein [Sinorhizobium meliloti AK83] gb|AEH83271.1| conserved hypothetical protein [Sinorhizobium meliloti SM11] Length = 317 Score = 521 bits (1343), Expect = e-146, Method: Compositional matrix adjust. Identities = 253/317 (79%), Positives = 280/317 (88%) Query: 1 MNQMIRNTQETSMNRDNASHAGQAGPNELVPSRYALKIGEIDVLVVSDGVLPLPTKMLAH 60 MNQM NTQE SM R+NAS+ G+ P ELVPSRYA++IGEI+VLV+SDGVLPLPT ML H Sbjct: 1 MNQMSSNTQEASMKRENASYVGRPAPEELVPSRYAVQIGEIEVLVISDGVLPLPTAMLGH 60 Query: 61 NAEPAVRAAWLDDMFLPPDAFDWALNVVVVRSGGKTILVDAGLGSDPDLHLPKAGQTVKR 120 NA+PA RAAWL DMFLP DAFDWALNVVVVRSG +TIL+DAGLG DPDL+LP+AGQ +KR Sbjct: 61 NADPAARAAWLGDMFLPQDAFDWALNVVVVRSGEQTILIDAGLGLDPDLNLPRAGQLMKR 120 Query: 121 LEAAGIDLGSVTDVVLTHMHMDHVGGLLVEGVKERLRPDLRIHVAAAEVKFWEAPDFSRV 180 L AAGIDL SVTDVVLTHMHMDHVGGLLV+GVKE+L PDLRIHVAAAEVKFWE+PDF+ Sbjct: 121 LAAAGIDLASVTDVVLTHMHMDHVGGLLVDGVKEQLNPDLRIHVAAAEVKFWESPDFTHA 180 Query: 181 SMPPGFPDALRATAKRFRKEYQSRLRLFDEEHEVAPGVVVRRSGGHTPGHSVVRLASGGD 240 MP GFPDALRA AKRF K+YQ+ LRLF++E EVAPGVVV R+GGHTPGHSVVR+ASG D Sbjct: 181 VMPEGFPDALRAAAKRFAKDYQNHLRLFEDEREVAPGVVVSRTGGHTPGHSVVRVASGND 240 Query: 241 RLTFAGDLVFAVGFAHPEWHNGFEHDPEEAARARISLLRELAANRELLVATHMPFPSVGH 300 RL FAGD VFAVGF HP+WHNGFEHDPEEAAR R+ LL+ELAA ELLVATHMPFPSVGH Sbjct: 241 RLMFAGDAVFAVGFDHPDWHNGFEHDPEEAARVRVRLLQELAATGELLVATHMPFPSVGH 300 Query: 301 VAVEGDAFRWVPVFWDY 317 VAV+GD FRWVPVFWDY Sbjct: 301 VAVDGDTFRWVPVFWDY 317 >gb|AEG07827.1| beta-lactamase domain protein [Sinorhizobium meliloti BL225C] Length = 317 Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust. Identities = 253/317 (79%), Positives = 280/317 (88%) Query: 1 MNQMIRNTQETSMNRDNASHAGQAGPNELVPSRYALKIGEIDVLVVSDGVLPLPTKMLAH 60 MNQM NTQE SM R+NAS+ G+ P ELVPSRYA+KIGEI+VLV+SDGVLPLPT ML H Sbjct: 1 MNQMSSNTQEASMKRENASYVGRPAPEELVPSRYAVKIGEIEVLVISDGVLPLPTAMLGH 60 Query: 61 NAEPAVRAAWLDDMFLPPDAFDWALNVVVVRSGGKTILVDAGLGSDPDLHLPKAGQTVKR 120 NA+PA RAAWL DMFLP DAFDWALNVVVVRSG +TIL+DAGLG DPDL+LP+AGQ +KR Sbjct: 61 NADPAARAAWLGDMFLPQDAFDWALNVVVVRSGEQTILIDAGLGLDPDLNLPRAGQLMKR 120 Query: 121 LEAAGIDLGSVTDVVLTHMHMDHVGGLLVEGVKERLRPDLRIHVAAAEVKFWEAPDFSRV 180 L AAGI+L SVTDVVLTHMHMDHVGGLLV+GVKE+L PDLRIHVAAAEVKFWE+PDF+ Sbjct: 121 LAAAGIELASVTDVVLTHMHMDHVGGLLVDGVKEQLNPDLRIHVAAAEVKFWESPDFTHA 180 Query: 181 SMPPGFPDALRATAKRFRKEYQSRLRLFDEEHEVAPGVVVRRSGGHTPGHSVVRLASGGD 240 MP GFPDALRA AKRF K+YQ+ LRLF++E EVAPGVVV R+GGHTPGHSVVR+ASG D Sbjct: 181 VMPEGFPDALRAAAKRFAKDYQNHLRLFEDEREVAPGVVVSRTGGHTPGHSVVRVASGND 240 Query: 241 RLTFAGDLVFAVGFAHPEWHNGFEHDPEEAARARISLLRELAANRELLVATHMPFPSVGH 300 RL FAGD VFAVGF HP+WHNGFEHDPEEAAR R+ LL+ELAA ELLVATHMPFPSVGH Sbjct: 241 RLMFAGDAVFAVGFDHPDWHNGFEHDPEEAARVRVRLLQELAATGELLVATHMPFPSVGH 300 Query: 301 VAVEGDAFRWVPVFWDY 317 VAV+GD FRWVPVFWDY Sbjct: 301 VAVDGDTFRWVPVFWDY 317 >ref|ZP_08530969.1| hypothetical protein AGRO_4981 [Agrobacterium sp. ATCC 31749] gb|EGL62252.1| hypothetical protein AGRO_4981 [Agrobacterium sp. ATCC 31749] Length = 322 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 251/316 (79%), Positives = 277/316 (87%) Query: 2 NQMIRNTQETSMNRDNASHAGQAGPNELVPSRYALKIGEIDVLVVSDGVLPLPTKMLAHN 61 N QET M+ DN H G+ P ELVPSRYA+KIGEI+VLV+SDGVLPLPTKML HN Sbjct: 7 NSRRTGQQETDMSLDNTPHTGRPAPEELVPSRYAVKIGEIEVLVISDGVLPLPTKMLGHN 66 Query: 62 AEPAVRAAWLDDMFLPPDAFDWALNVVVVRSGGKTILVDAGLGSDPDLHLPKAGQTVKRL 121 + A RA WLD+MFLP +AFDWALN VVVRSG + IL+DAGLG DP+L+LP+AGQ VKRL Sbjct: 67 VDAAERAVWLDNMFLPQEAFDWALNAVVVRSGAQVILIDAGLGLDPELNLPRAGQLVKRL 126 Query: 122 EAAGIDLGSVTDVVLTHMHMDHVGGLLVEGVKERLRPDLRIHVAAAEVKFWEAPDFSRVS 181 E+AGIDLGSVTDVVLTHMHMDHVGGLLV+GVKERLRPDLRIHVAAAEVKFWEAPDF+ V+ Sbjct: 127 ESAGIDLGSVTDVVLTHMHMDHVGGLLVDGVKERLRPDLRIHVAAAEVKFWEAPDFTHVN 186 Query: 182 MPPGFPDALRATAKRFRKEYQSRLRLFDEEHEVAPGVVVRRSGGHTPGHSVVRLASGGDR 241 MP GFPDALRATAKRF KEYQ +LRLFD+E++VAPGVVV R+GGHTPGHSVVR+ASG DR Sbjct: 187 MPAGFPDALRATAKRFAKEYQDQLRLFDDEYQVAPGVVVSRTGGHTPGHSVVRVASGKDR 246 Query: 242 LTFAGDLVFAVGFAHPEWHNGFEHDPEEAARARISLLRELAANRELLVATHMPFPSVGHV 301 L FAGD VFAVGF HP+W NGFEHDPEEAAR R+ LLRELAA ELLVATHMPFPSVGHV Sbjct: 247 LMFAGDAVFAVGFEHPDWFNGFEHDPEEAARVRVRLLRELAATGELLVATHMPFPSVGHV 306 Query: 302 AVEGDAFRWVPVFWDY 317 AV+GDAFRWVPVFWDY Sbjct: 307 AVDGDAFRWVPVFWDY 322 >ref|NP_356347.2| hypothetical protein Atu4307 [Agrobacterium tumefaciens str. C58] gb|AAK89132.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 322 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 250/309 (80%), Positives = 276/309 (89%) Query: 9 QETSMNRDNASHAGQAGPNELVPSRYALKIGEIDVLVVSDGVLPLPTKMLAHNAEPAVRA 68 QET M+ DN H G+ P ELVPSRYA+KIGEI+VLV+SDGVLPLPTKML HN + A RA Sbjct: 14 QETDMSLDNTPHTGRPAPEELVPSRYAVKIGEIEVLVISDGVLPLPTKMLGHNVDAAERA 73 Query: 69 AWLDDMFLPPDAFDWALNVVVVRSGGKTILVDAGLGSDPDLHLPKAGQTVKRLEAAGIDL 128 WLD+MFLP +AFDWALN VVVRSG + IL+DAGLG DP+L+LP+AGQ VKRLE+AGIDL Sbjct: 74 VWLDNMFLPQEAFDWALNAVVVRSGAQVILIDAGLGLDPELNLPRAGQLVKRLESAGIDL 133 Query: 129 GSVTDVVLTHMHMDHVGGLLVEGVKERLRPDLRIHVAAAEVKFWEAPDFSRVSMPPGFPD 188 GSVTDVVLTHMHMDHVGGLLV+GVKERLRPDLRIHVAAAEVKFWEAPDF+ V+MP GFPD Sbjct: 134 GSVTDVVLTHMHMDHVGGLLVDGVKERLRPDLRIHVAAAEVKFWEAPDFTHVNMPAGFPD 193 Query: 189 ALRATAKRFRKEYQSRLRLFDEEHEVAPGVVVRRSGGHTPGHSVVRLASGGDRLTFAGDL 248 ALRATAKRF KEYQ +LRLFD+E++VAPGVVV R+GGHTPGHSVVR+ASG DRL FAGD Sbjct: 194 ALRATAKRFAKEYQDQLRLFDDEYQVAPGVVVSRTGGHTPGHSVVRVASGKDRLMFAGDA 253 Query: 249 VFAVGFAHPEWHNGFEHDPEEAARARISLLRELAANRELLVATHMPFPSVGHVAVEGDAF 308 VFAVGF HP+W NGFEHDPEEAAR R+ LLRELAA ELLVATHMPFPSVGHVAV+GDAF Sbjct: 254 VFAVGFEHPDWFNGFEHDPEEAARVRVRLLRELAATGELLVATHMPFPSVGHVAVDGDAF 313 Query: 309 RWVPVFWDY 317 RWVPVFWDY Sbjct: 314 RWVPVFWDY 322 >ref|YP_004632492.1| metal-dependent hydrolase [Oligotropha carboxidovorans OM5] gb|AEI02675.1| metal-dependent hydrolase [Oligotropha carboxidovorans OM4] gb|AEI06251.1| metal-dependent hydrolase [Oligotropha carboxidovorans OM5] Length = 315 Score = 514 bits (1325), Expect = e-144, Method: Compositional matrix adjust. Identities = 256/317 (80%), Positives = 277/317 (87%), Gaps = 2/317 (0%) Query: 1 MNQMIRNTQETSMNRDNASHAGQAGPNELVPSRYALKIGEIDVLVVSDGVLPLPTKMLAH 60 MNQMIR Q+T N +A P+ELVPSRYA+++G+IDVLVVSDGVLPLPTKMLAH Sbjct: 1 MNQMIRTPQKTKAN--TPLPRSKAKPDELVPSRYAVRVGDIDVLVVSDGVLPLPTKMLAH 58 Query: 61 NAEPAVRAAWLDDMFLPPDAFDWALNVVVVRSGGKTILVDAGLGSDPDLHLPKAGQTVKR 120 NA PA RAAWLDDMFLP DAFDWALNVVVVRSGGKTIL+DAGLG DPDLHLP+AGQ KR Sbjct: 59 NAAPADRAAWLDDMFLPQDAFDWALNVVVVRSGGKTILIDAGLGFDPDLHLPRAGQLAKR 118 Query: 121 LEAAGIDLGSVTDVVLTHMHMDHVGGLLVEGVKERLRPDLRIHVAAAEVKFWEAPDFSRV 180 L AAGIDLGSVTDVVLTHMHMDHVGGLLVEGVKE+L PDLRIHVAAAEVKFWE+PDFS Sbjct: 119 LAAAGIDLGSVTDVVLTHMHMDHVGGLLVEGVKEQLHPDLRIHVAAAEVKFWESPDFSHT 178 Query: 181 SMPPGFPDALRATAKRFRKEYQSRLRLFDEEHEVAPGVVVRRSGGHTPGHSVVRLASGGD 240 +MP GFPDALRATAKRF EY+S+ +LFDE HEVAPGVV R+GGHTPGHSVVRLASGG+ Sbjct: 179 AMPQGFPDALRATAKRFMDEYRSQFQLFDETHEVAPGVVAYRTGGHTPGHSVVRLASGGE 238 Query: 241 RLTFAGDLVFAVGFAHPEWHNGFEHDPEEAARARISLLRELAANRELLVATHMPFPSVGH 300 LTFAGD VFAVGF P+WHNGFEHDPEEAAR RI LLRELA E+LVATH+PFPSVG Sbjct: 239 ALTFAGDAVFAVGFDQPDWHNGFEHDPEEAARVRIRLLRELAETGEMLVATHLPFPSVGR 298 Query: 301 VAVEGDAFRWVPVFWDY 317 VAV+GDAFRWVPVFWDY Sbjct: 299 VAVDGDAFRWVPVFWDY 315