BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0135.0009.p (393 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08630137.1| acyl-CoA dehydrogenase, long-chain specific [... 737 0.0 ref|YP_001241051.1| putative acyl-CoA dehydrogenase [Bradyrhizob... 733 0.0 ref|YP_001412339.1| acyl-CoA dehydrogenase domain-containing pro... 536 e-150 ref|YP_616154.1| acyl-CoA dehydrogenase-like protein [Sphingopyx... 491 e-137 ref|YP_760791.1| acyl-CoA dehydrogenase family protein [Hyphomon... 484 e-134 >ref|ZP_08630137.1| acyl-CoA dehydrogenase, long-chain specific [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07231.1| acyl-CoA dehydrogenase, long-chain specific [Bradyrhizobiaceae bacterium SG-6C] Length = 393 Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/393 (90%), Positives = 371/393 (94%) Query: 1 MELALSPEDAAFRDEVRAFIKDNYPAEMRVANPETDLSKEQMLLWHRILHDKGWIAPLWP 60 MEL LS ED AFRDEVRAFI DNYP EMRV NPETDL+KEQ +LWH+ILH KGWIAPLWP Sbjct: 1 MELKLSKEDEAFRDEVRAFIADNYPQEMRVPNPETDLTKEQSMLWHKILHKKGWIAPLWP 60 Query: 61 KEYGGPGWSITRRFIFEQETTRAGTMPPLAFSVTMVGPVIYTFGNDAQKRKFLPRILSGE 120 KEYGGPGWSIT+RFI+EQETTRAGT+PPLAFSVTMVGPVIYTFGNDAQK+K+LPRILSGE Sbjct: 61 KEYGGPGWSITQRFIWEQETTRAGTLPPLAFSVTMVGPVIYTFGNDAQKKKYLPRILSGE 120 Query: 121 DWWCQGYSEPGSGSDLATVRTKAVRDGDHYIVNGHKTWTTLAQHADWIFCLVRTDPTAKP 180 DWWCQGYSEPGSGSDLA+VRTKAVRDGDHYIVNGHKTWTTLAQHADWIFCLVRTDPTAKP Sbjct: 121 DWWCQGYSEPGSGSDLASVRTKAVRDGDHYIVNGHKTWTTLAQHADWIFCLVRTDPTAKP 180 Query: 181 QSGISFLLIDMKSPGVTVRPIITIDGSHEVNDVFLENVRVPAENLIGEENKGWTYAKFLL 240 QSGISFLLIDMKSPGVTVRPIITIDGSHEVNDVFLENVRVP ENLIGEENKGWTYAKFLL Sbjct: 181 QSGISFLLIDMKSPGVTVRPIITIDGSHEVNDVFLENVRVPVENLIGEENKGWTYAKFLL 240 Query: 241 GNERTSMAGIGRSTRYLERLKRIVKAEIPEDDPAHLEFIRDIARVELDVLALEATELRVV 300 GNERTSMAGIGRS RYL +LK+IVK EI EDDPA+ EF +DIARVELDVLALEATELRVV Sbjct: 241 GNERTSMAGIGRSMRYLGKLKKIVKTEIGEDDPAYDEFTKDIARVELDVLALEATELRVV 300 Query: 301 AQMARGIDPGPAASLFKIRGTEIFQDITELTHRAIGNYGLAIREHPVSANHFMPGPDYGH 360 AQMARGIDPGPAASLFKIRGTEIFQ IT+LTHRAIGNYGLA+REHP S N FMPGP GH Sbjct: 301 AQMARGIDPGPAASLFKIRGTEIFQRITDLTHRAIGNYGLALREHPASPNIFMPGPADGH 360 Query: 361 TASEKYLNSRKLSIYGGSNEIQRNIIAKAVLGL 393 TA EKYLN+RKLSIYGGSNEIQRNIIAKAVLGL Sbjct: 361 TAPEKYLNARKLSIYGGSNEIQRNIIAKAVLGL 393 >ref|YP_001241051.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ37145.1| Putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 393 Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/393 (88%), Positives = 373/393 (94%) Query: 1 MELALSPEDAAFRDEVRAFIKDNYPAEMRVANPETDLSKEQMLLWHRILHDKGWIAPLWP 60 MEL LS EDAAFRDEVRAFI +NYPAEMRV NPETDL+KEQ LLWHRIL+ KGWIAPLWP Sbjct: 1 MELKLSKEDAAFRDEVRAFIAENYPAEMRVPNPETDLTKEQSLLWHRILYRKGWIAPLWP 60 Query: 61 KEYGGPGWSITRRFIFEQETTRAGTMPPLAFSVTMVGPVIYTFGNDAQKRKFLPRILSGE 120 KEYGGPGWSIT+RFIFEQET+RAGT+PPLAFSVTMVGPVIYTFGN AQK +FLPRILSGE Sbjct: 61 KEYGGPGWSITQRFIFEQETSRAGTLPPLAFSVTMVGPVIYTFGNAAQKARFLPRILSGE 120 Query: 121 DWWCQGYSEPGSGSDLATVRTKAVRDGDHYIVNGHKTWTTLAQHADWIFCLVRTDPTAKP 180 DWWCQGYSEPG+GSDLA VRT+AVRDGDHY+VNGHKTWTTLAQHADWIFCLVRTDP AKP Sbjct: 121 DWWCQGYSEPGAGSDLAAVRTRAVRDGDHYVVNGHKTWTTLAQHADWIFCLVRTDPAAKP 180 Query: 181 QSGISFLLIDMKSPGVTVRPIITIDGSHEVNDVFLENVRVPAENLIGEENKGWTYAKFLL 240 Q+GISFLLIDMK+PGVTVRPIITIDGSHEVNDVFLE+VRVP ENLIGEENKGWTYAKFLL Sbjct: 181 QAGISFLLIDMKTPGVTVRPIITIDGSHEVNDVFLEDVRVPVENLIGEENKGWTYAKFLL 240 Query: 241 GNERTSMAGIGRSTRYLERLKRIVKAEIPEDDPAHLEFIRDIARVELDVLALEATELRVV 300 GNERTSMAGIGRSTRYL+RLK+IVK+EI EDDP + +FIR+IARVELD+LALEATELR+V Sbjct: 241 GNERTSMAGIGRSTRYLQRLKQIVKSEIAEDDPTYRDFIREIARVELDLLALEATELRIV 300 Query: 301 AQMARGIDPGPAASLFKIRGTEIFQDITELTHRAIGNYGLAIREHPVSANHFMPGPDYGH 360 AQMARGIDPGPAASLFKIRGTEIFQ ITELTH+AIGN GLA+RE P SAN FMPGPDYGH Sbjct: 301 AQMARGIDPGPAASLFKIRGTEIFQRITELTHQAIGNDGLALREQPSSANRFMPGPDYGH 360 Query: 361 TASEKYLNSRKLSIYGGSNEIQRNIIAKAVLGL 393 TA+EKYLN+RKLSIYGGSNEIQ NIIAKAVLGL Sbjct: 361 TATEKYLNARKLSIYGGSNEIQHNIIAKAVLGL 393 >ref|YP_001412339.1| acyl-CoA dehydrogenase domain-containing protein [Parvibaculum lavamentivorans DS-1] gb|ABS62682.1| acyl-CoA dehydrogenase domain protein [Parvibaculum lavamentivorans DS-1] Length = 397 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 257/399 (64%), Positives = 314/399 (78%), Gaps = 8/399 (2%) Query: 1 MELALSPEDAAFRDEVRAFIKDNYPAEMRVAN-PETDLSKEQMLLWHRILHDKGWIAPLW 59 M+++ SPE+ AFRDEVR FI +NYP E++ ++SKE +L WHRIL+ KGW+ P W Sbjct: 1 MDMSFSPEELAFRDEVREFIANNYPQELKGGRRTRGEMSKEDILKWHRILYKKGWVVPHW 60 Query: 60 PKEYGGPGWSITRRFIFEQETTRAGTMPPLAFSVTMVGPVIYTFGNDAQKRKFLPRILSG 119 P EYGG GW+IT+R+I+ +E RA T P L F ++MVGPVIYTFGN+ QK++FLP ILS Sbjct: 61 PVEYGGTGWTITQRYIWNEENARAETSPLLPFGLSMVGPVIYTFGNEEQKKRFLPGILSA 120 Query: 120 EDWWCQGYSEPGSGSDLATVRTKAVRDGDHYIVNGHKTWTTLAQHADWIFCLVRTDPTAK 179 +DWWCQGYSEPGSGSDLA++RT+AVR+GDHYIVNG KTWTTLAQ ADW+FCLVRTDP AK Sbjct: 121 DDWWCQGYSEPGSGSDLASLRTRAVREGDHYIVNGGKTWTTLAQFADWMFCLVRTDPNAK 180 Query: 180 PQSGISFLLIDMKSPGVTVRPIITIDGSHEVNDVFLENVRVPAENLIGEENKGWTYAKFL 239 Q GISFLLIDMK+PG+TVRPIIT+DGSHEVN+VFLE+V+VP ENLIGEENKGWTYAKFL Sbjct: 181 AQEGISFLLIDMKTPGITVRPIITMDGSHEVNEVFLEDVKVPVENLIGEENKGWTYAKFL 240 Query: 240 LGNERTSMAGIGRSTRYLERLKRIVKAEIPEDDPAHL--EFIRDIARVELDVLALEATEL 297 LGNER+ +AG+ RS + +ERLK+I AE+ + +P EF R +A +E+D+ ALE TEL Sbjct: 241 LGNERSGIAGVARSKKAIERLKKIADAELVDGEPLMKTDEFARKVAELEIDLSALEVTEL 300 Query: 298 RVVAQMARGIDPGPAASLFKIRGTEIFQDITELTHRAIGNYGLAIREHP---VSANHFMP 354 R +A ++G PGP AS+ KI+GTEI Q ITELT A+GNY A + P V+ N F+P Sbjct: 301 RTLAAESKGRGPGPEASILKIKGTEIQQRITELTMEAVGNY--AFVQAPRMEVTGNEFLP 358 Query: 355 GPDYGHTASEKYLNSRKLSIYGGSNEIQRNIIAKAVLGL 393 GPDY S+ Y N RK SIYGGSNEIQ NIIAK VLGL Sbjct: 359 GPDYAPGVSQDYFNMRKTSIYGGSNEIQHNIIAKMVLGL 397 >ref|YP_616154.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] gb|ABF52821.1| acyl-CoA dehydrogenase-like protein [Sphingopyxis alaskensis RB2256] Length = 397 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 249/404 (61%), Positives = 295/404 (73%), Gaps = 18/404 (4%) Query: 1 MELALSPEDAAFRDEVRAFIKDNYPAEMRVANPE-TDLSKEQMLLWHRILHDKGWIAPLW 59 M++ SPED AF+ EVR FI DNYPAE+R E +LSKE L WH+IL+ KGWIAP W Sbjct: 1 MDMEFSPEDLAFQQEVRQFIADNYPAELRGKQDEGEELSKEDFLAWHKILYKKGWIAPAW 60 Query: 60 PKEYGGPGWSITRRFIFEQETTRAGTMPPLAFSVTMVGPVIYTFGNDAQKRKFLPRILSG 119 P EYGG GW+ T+RFI+ +ET RA + + F ++MVGPVIYTFG QK FLPRILSG Sbjct: 61 PVEYGGTGWTPTQRFIWSEETARADCIRLMPFGLSMVGPVIYTFGTPEQKAHFLPRILSG 120 Query: 120 EDWWCQGYSEPGSGSDLATVRTKAVRDGDHYIVNGHKTWTTLAQHADWIFCLVRTDPTAK 179 EDWWCQGYSEPGSGSDLA++RT AVRDGDHYIVNG KTWTTLAQHADW F LVRTD AK Sbjct: 121 EDWWCQGYSEPGSGSDLASLRTTAVRDGDHYIVNGQKTWTTLAQHADWGFFLVRTDKDAK 180 Query: 180 PQSGISFLLIDMKSPGVTVRPIITIDGSHEVNDVFLENVRVPAENLIGEENKGWTYAKFL 239 Q GISFLLIDMKSPG+TVRPIIT+ G HEVN+V+LE+VRVP N + EENKGWT AKFL Sbjct: 181 QQEGISFLLIDMKSPGITVRPIITLGGEHEVNEVWLEDVRVPVANRVYEENKGWTCAKFL 240 Query: 240 LGNERTSMAGIGRSTRYLERLKRIVKAEIPEDDP--AHLEFIRDIARVELDVLALEATEL 297 L +ERT +AG+ S R +E++K I + E+ D P A+ F R +A +E+D+ ALE TEL Sbjct: 241 LAHERTGIAGVAASKRGIEKVKAIARTELDGDKPLLANPFFKRKVAELEVDLTALEFTEL 300 Query: 298 RVVAQMARGIDPGPAASLFKIRGTEIFQDITELTHRAIGNYGLAI--------REHPVSA 349 R +A G PGP +SL KI+G+EI Q +TELT A+G+YG EHP+ Sbjct: 301 RSLAGANAGKGPGPESSLLKIKGSEIQQRLTELTLEAVGHYGAPYFRGFGEGDNEHPI-- 358 Query: 350 NHFMPGPDYGHTASEKYLNSRKLSIYGGSNEIQRNIIAKAVLGL 393 GPDY H A+ Y N RK +IYGGSNEIQRNIIAK VLGL Sbjct: 359 -----GPDYAHRAAPTYFNMRKTTIYGGSNEIQRNIIAKMVLGL 397 >ref|YP_760791.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC 15444] gb|ABI77354.1| acyl-CoA dehydrogenase family protein [Hyphomonas neptunium ATCC 15444] Length = 397 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 232/397 (58%), Positives = 293/397 (73%), Gaps = 4/397 (1%) Query: 1 MELALSPEDAAFRDEVRAFIKDNYPAEMRVANPETDLSKEQMLLWHRILHDKGWIAPLWP 60 M L SPE+ AFRDEVR FI+DNYP E+ DL++EQ L WH+IL KGW AP WP Sbjct: 1 MNLEFSPEEIAFRDEVRTFIRDNYPQELVGLGNREDLTREQFLAWHKILGKKGWSAPAWP 60 Query: 61 KEYGGPGWSITRRFIFEQETTRAGTMPPLAFSVTMVGPVIYTFGNDAQKRKFLPRILSGE 120 ++YGG GW+ T+R+I+ +E R + PL F ++MVGPVIYTFGN+ QK K LP IL+G+ Sbjct: 61 QKYGGTGWTSTQRYIWSEENARVDALMPLPFGISMVGPVIYTFGNEEQKAKHLPGILAGD 120 Query: 121 DWWCQGYSEPGSGSDLATVRTKAVRDGDHYIVNGHKTWTTLAQHADWIFCLVRTDPTAKP 180 WW QGYSEPG+GSDLA+++T AVRDGDHYI+NG KTWTTLAQHADW F L RTDP+AK Sbjct: 121 VWWAQGYSEPGAGSDLASLKTTAVRDGDHYILNGQKTWTTLAQHADWGFFLCRTDPSAKA 180 Query: 181 QSGISFLLIDMKSPGVTVRPIITIDGSHEVNDVFLENVRVPAENLIGEENKGWTYAKFLL 240 Q GISF+L+DMKSPG+ VRPI IDG+HEVN+ +L +VRVP ENL+G+EN+GWTYAKFLL Sbjct: 181 QEGISFILVDMKSPGIEVRPIKLIDGTHEVNETWLTDVRVPVENLVGKENEGWTYAKFLL 240 Query: 241 GNERTSMAGIGRSTRYLERLKRIVKAEIPEDDP--AHLEFIRDIARVELDVLALEATELR 298 +ER+ +AG+ RS R +ERL+ I E + P EF R I+++E+D+ ALE TELR Sbjct: 241 AHERSGIAGVARSKRGVERLRTIATQETMDGTPLIKTDEFARKISQLEIDLTALEFTELR 300 Query: 299 VVAQMARGIDPGPAASLFKIRGTEIFQDITELTHRAIGNYGLAIREHPV--SANHFMPGP 356 +A A G PGP +S+ KI+GTEI Q +TELT A+GNYG + +N GP Sbjct: 301 TLASEAAGKGPGPESSILKIKGTEIQQRLTELTLEAVGNYGAPYARGMMHDGSNEVGVGP 360 Query: 357 DYGHTASEKYLNSRKLSIYGGSNEIQRNIIAKAVLGL 393 DY + +++ Y N RK SIYGGSNEIQRNII+K +LGL Sbjct: 361 DYSNFSADSYFNMRKTSIYGGSNEIQRNIISKMILGL 397