BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0135.0005.p (168 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769244.1| transcriptional regulator [Bradyrhizobium japon... 264 4e-69 ref|ZP_08630144.1| transcriptional regulator, HxlR family [Brady... 264 4e-69 ref|YP_001241054.1| hypothetical protein BBta_5152 [Bradyrhizobi... 264 4e-69 ref|ZP_08627909.1| transcriptional regulator, HxlR family [Brady... 253 6e-66 ref|YP_001566372.1| HxlR family transcriptional regulator [Delft... 212 2e-53 >ref|NP_769244.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC47869.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 182 Score = 264 bits (674), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 117/152 (76%), Positives = 138/152 (90%) Query: 1 MKWDALEEEPCSVARTVAVIGDRWSLLVLRECFLRIRRFDDFQASLGITRHLLADRLKKL 60 MKWD L+EE CS++RTVAV+GDRW+LL+LRECFLR+RRF+ FQ+SL ITRHLL++RLKKL Sbjct: 29 MKWDTLDEESCSLSRTVAVVGDRWTLLILRECFLRVRRFEGFQSSLQITRHLLSERLKKL 88 Query: 61 VRFGVLRKIPYQEAPKRYEYILTQKGLDLYPIIMSIVHWGNVHMVDSRGRPMLHEHKTCK 120 VRFG+LR++PY EAPKRYEYILTQKGLDLYPIIM++VHWG+ HM D RGRPMLHEH+TC Sbjct: 89 VRFGILRRVPYSEAPKRYEYILTQKGLDLYPIIMAMVHWGDTHMGDERGRPMLHEHRTCG 148 Query: 121 KMFDPVMVCSECGEPLSAKAVHVHPGPGARKS 152 K+FDPVMVCSECGE L AK VHVH GPG R++ Sbjct: 149 KLFDPVMVCSECGEVLHAKQVHVHAGPGRRET 180 >ref|ZP_08630144.1| transcriptional regulator, HxlR family [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07017.1| transcriptional regulator, HxlR family [Bradyrhizobiaceae bacterium SG-6C] Length = 173 Score = 264 bits (674), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 122/161 (75%), Positives = 141/161 (87%), Gaps = 2/161 (1%) Query: 1 MKWDALEEEPCSVARTVAVIGDRWSLLVLRECFLRIRRFDDFQASLGITRHLLADRLKKL 60 M+WD LEEEPCS+ART+ VIGDRWSLL+LRECFLR RRF+ FQ++LGITRHLLA+RLKKL Sbjct: 1 MRWDELEEEPCSMARTIGVIGDRWSLLILRECFLRTRRFEAFQSALGITRHLLAERLKKL 60 Query: 61 VRFGVLRKIPYQEAPKRYEYILTQKGLDLYPIIMSIVHWGNVHMVDSRGRPMLHEHKTCK 120 VR GVLR++ YQE+PKR+EYILTQKGLDLYPI+M+IVHWG++HMVD RGRP+LHEH+ C Sbjct: 61 VRLGVLRRVVYQESPKRHEYILTQKGLDLYPIMMAIVHWGDIHMVDERGRPLLHEHQKCG 120 Query: 121 KMFDPVMVCSECGEPLSAKAVHVHPGPGARK--SSPVHAKA 159 MF+PV VCSECGEPL AK VHVHPGPGAR SP AK Sbjct: 121 HMFNPVTVCSECGEPLLAKEVHVHPGPGARPKIDSPKPAKT 161 >ref|YP_001241054.1| hypothetical protein BBta_5152 [Bradyrhizobium sp. BTAi1] gb|ABQ37148.1| hypothetical protein BBta_5152 [Bradyrhizobium sp. BTAi1] Length = 188 Score = 264 bits (674), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 118/153 (77%), Positives = 138/153 (90%) Query: 1 MKWDALEEEPCSVARTVAVIGDRWSLLVLRECFLRIRRFDDFQASLGITRHLLADRLKKL 60 MKW LEEEPCS+ART+AVIGDRW+LL+LRECFLR RRF+ FQ+SLGITRHLLA+RLKKL Sbjct: 1 MKWKELEEEPCSMARTIAVIGDRWTLLILRECFLRKRRFEAFQSSLGITRHLLAERLKKL 60 Query: 61 VRFGVLRKIPYQEAPKRYEYILTQKGLDLYPIIMSIVHWGNVHMVDSRGRPMLHEHKTCK 120 VR G+LR++PYQE+PKR+EYILTQKGLDLYPI+M+IVHWG+ HMVD RGRP+LHEHK C Sbjct: 61 VRQGILRRVPYQESPKRHEYILTQKGLDLYPIMMAIVHWGDTHMVDERGRPVLHEHKKCG 120 Query: 121 KMFDPVMVCSECGEPLSAKAVHVHPGPGARKSS 153 K+F+PVM+CSECGEPL AK VH HPGPG +S Sbjct: 121 KLFEPVMICSECGEPLLAKEVHTHPGPGGWAAS 153 >ref|ZP_08627909.1| transcriptional regulator, HxlR family [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09438.1| transcriptional regulator, HxlR family [Bradyrhizobiaceae bacterium SG-6C] Length = 165 Score = 253 bits (647), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 116/163 (71%), Positives = 140/163 (85%) Query: 1 MKWDALEEEPCSVARTVAVIGDRWSLLVLRECFLRIRRFDDFQASLGITRHLLADRLKKL 60 MKWD L+EE CS++RTV+VIGDRW+LL+LR+CF RIRRFD+FQ+ LGITRHLLA+RL+KL Sbjct: 1 MKWDRLDEEACSMSRTVSVIGDRWTLLILRDCFRRIRRFDEFQSRLGITRHLLAERLRKL 60 Query: 61 VRFGVLRKIPYQEAPKRYEYILTQKGLDLYPIIMSIVHWGNVHMVDSRGRPMLHEHKTCK 120 VR GVLRK+ YQE PKRYEYILTQKGL+L+PI+M+IVHWG+VHM D RGRP+LH+HKTC Sbjct: 61 VRQGVLRKVVYQERPKRYEYILTQKGLELHPIMMAIVHWGDVHMADERGRPVLHQHKTCG 120 Query: 121 KMFDPVMVCSECGEPLSAKAVHVHPGPGARKSSPVHAKAQERA 163 FDPVM CS C EPL+AK VHVHPGPGA KS + +++A Sbjct: 121 HHFDPVMTCSVCNEPLTAKEVHVHPGPGADKSKTLLPSLEQQA 163 >ref|YP_001566372.1| HxlR family transcriptional regulator [Delftia acidovorans SPH-1] gb|ABX37987.1| transcriptional regulator, HxlR family [Delftia acidovorans SPH-1] Length = 149 Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 97/149 (65%), Positives = 119/149 (79%) Query: 1 MKWDALEEEPCSVARTVAVIGDRWSLLVLRECFLRIRRFDDFQASLGITRHLLADRLKKL 60 MKW+ LEEE CS+ARTV+VIGDRW+LLVLR+CFL +RRFD+F LGI+R +L+DRL +L Sbjct: 1 MKWNELEEERCSIARTVSVIGDRWTLLVLRDCFLGVRRFDEFLGRLGISRPMLSDRLARL 60 Query: 61 VRFGVLRKIPYQEAPKRYEYILTQKGLDLYPIIMSIVHWGNVHMVDSRGRPMLHEHKTCK 120 V GVL+K+ YQEAP RYEY LT KGLDL+P++M+IVHWG+VHM GRP+LH H C Sbjct: 61 VEAGVLKKVAYQEAPVRYEYRLTPKGLDLHPVVMAIVHWGDVHMSGEEGRPLLHRHTVCG 120 Query: 121 KMFDPVMVCSECGEPLSAKAVHVHPGPGA 149 FDP++VCSEC PL A+ V V PGPGA Sbjct: 121 HTFDPLVVCSECLAPLHARDVAVEPGPGA 149