BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0135.0001.p (551 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772913.1| biotin sulfoxide reductase [Bradyrhizobium japo... 967 0.0 ref|YP_002490047.1| molybdopterin oxidoreductase [Methylobacteri... 788 0.0 ref|NP_884404.1| putative biotin sulfoxide reductase [Bordetella... 722 0.0 ref|ZP_06689786.1| S/N-oxide reductase [Achromobacter piechaudii... 688 0.0 gb|EGP47280.1| molybdopterin oxidoreductase [Achromobacter xylos... 687 0.0 >ref|NP_772913.1| biotin sulfoxide reductase [Bradyrhizobium japonicum USDA 110] dbj|BAC51538.1| bll6273 [Bradyrhizobium japonicum USDA 110] Length = 788 Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/517 (90%), Positives = 486/517 (94%) Query: 34 TALMLGIVHTLVSEGLHDQAFLDRYTEGWPVFLRYLTGESDGVSKNAEWAAAICGIEAGI 93 TALMLGIVHTLVSE LHDQAFLDRYTEGWPVFLRYLTGESDG K+AEWAAAI G++A Sbjct: 271 TALMLGIVHTLVSEKLHDQAFLDRYTEGWPVFLRYLTGESDGQPKSAEWAAAISGVDADT 330 Query: 94 IRALARRLAGRRALITVSHSLQRAEHGEQPVWMGMVLAAALGQIGLPGGGYAYSLGAIGY 153 IR LARRLAG+RALITVSHSLQRAEHGEQPVWMGMVLAAALGQIGLPGGGYAYSLGAIGY Sbjct: 331 IRTLARRLAGKRALITVSHSLQRAEHGEQPVWMGMVLAAALGQIGLPGGGYAYSLGAIGY 390 Query: 154 YGRRVNAVPGPTLGQGRNGVADFIPVARIADMLLNPGTTYRYNGETRTYPDIRLVYWAGG 213 YGRRVN VPGPTLGQGRNGV DFIPVARIADMLLNPG TYRYNGETRTYPDIRLVYWAGG Sbjct: 391 YGRRVNDVPGPTLGQGRNGVRDFIPVARIADMLLNPGATYRYNGETRTYPDIRLVYWAGG 450 Query: 214 NPFHHHQDLNRLRKAFARLDTLVVHELAWTATARHADIVLPSTMTLEREDIGYSSNDPLM 273 NPFHHHQD+NRLRKAFA+LDT VVHELAWTATARHADIVLPSTMTLEREDIGYSSNDPLM Sbjct: 451 NPFHHHQDINRLRKAFAQLDTFVVHELAWTATARHADIVLPSTMTLEREDIGYSSNDPLM 510 Query: 274 VAMHRIAEPFGLARDDYEIFADLAERLGAREPFTEGRTSRQWLEHLFEPTRKALAARGLE 333 VAMHRIAEPFGLARDDYEIFADLAERLGAREPFTEGRTSR+WL+HL+EPTR +LA RGLE Sbjct: 511 VAMHRIAEPFGLARDDYEIFADLAERLGAREPFTEGRTSREWLKHLYEPTRASLAMRGLE 570 Query: 334 APSFEEFWARGSLVVPQHLDDGGSLRRFREDPLARPLPTPSGRIEIFSQKIASHGDADCP 393 APSF+EFW RGSLVVPQ DDGG LRRFREDP+A LPTPSGRIEIFS +IA HGDADCP Sbjct: 571 APSFDEFWQRGSLVVPQQPDDGGRLRRFREDPVAHALPTPSGRIEIFSTRIAGHGDADCP 630 Query: 394 GHPVWLEKTDTPTSGAPCFLVANQPVTRLHSQLDFGGHSLDAKHRGREVARMNPRDAKPR 453 GHPVWL+KTD P GAPCFLVANQPVTRLHSQLDFGGHSL AKHRGREVARMNP DA R Sbjct: 631 GHPVWLDKTDMPKPGAPCFLVANQPVTRLHSQLDFGGHSLGAKHRGREVARMNPVDADAR 690 Query: 454 GIADGDIIRIFNARGACLAAVHVTDGIAPGVVQLPTGAWYDPMDPEEEAPLCVHGNPNVL 513 GI DGDIIR+FN RGACLAAVHVTDGIAPGVVQLPTGAWYDPMDPE++APLCVHGNPNVL Sbjct: 691 GIKDGDIIRLFNERGACLAAVHVTDGIAPGVVQLPTGAWYDPMDPEDDAPLCVHGNPNVL 750 Query: 514 TRDIGTSSFAQGCTGQLTSVEVERFNGNLPPIRAFDP 550 TRD+GTSSFAQGCTGQLT+VEVE+F GNLPPIRAFDP Sbjct: 751 TRDVGTSSFAQGCTGQLTTVEVEKFTGNLPPIRAFDP 787 >ref|YP_002490047.1| molybdopterin oxidoreductase [Methylobacterium nodulans ORS 2060] gb|ACL62880.1| molybdopterin oxidoreductase [Methylobacterium nodulans ORS 2060] Length = 784 Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/517 (73%), Positives = 430/517 (83%) Query: 34 TALMLGIVHTLVSEGLHDQAFLDRYTEGWPVFLRYLTGESDGVSKNAEWAAAICGIEAGI 93 TALM+ +VHTLV EG HD+AFL+RYT GWP F RYL GE+DG+ K+A WAA + G+ A Sbjct: 255 TALMMAMVHTLVVEGRHDRAFLERYTVGWPTFERYLLGEADGIPKDAHWAAPLTGVPADA 314 Query: 94 IRALARRLAGRRALITVSHSLQRAEHGEQPVWMGMVLAAALGQIGLPGGGYAYSLGAIGY 153 I ALARRL G+RAL+ VSHSLQRA +GEQPVWMGMVLAAALGQIGL GGGYAY LGAI Y Sbjct: 315 IMALARRLHGKRALVVVSHSLQRARYGEQPVWMGMVLAAALGQIGLSGGGYAYPLGAIAY 374 Query: 154 YGRRVNAVPGPTLGQGRNGVADFIPVARIADMLLNPGTTYRYNGETRTYPDIRLVYWAGG 213 YGRR NAV PTL QG N V +FIPVARIADMLL PG YR+NG+T TYP+I+L+YWAGG Sbjct: 375 YGRRKNAVKLPTLSQGSNSVREFIPVARIADMLLGPGEAYRFNGKTLTYPEIKLIYWAGG 434 Query: 214 NPFHHHQDLNRLRKAFARLDTLVVHELAWTATARHADIVLPSTMTLEREDIGYSSNDPLM 273 NPFHHHQDLNRL+KAFA +DTLVVHELAWTATARHADIVLP TMTLER+DIG SSNDPL+ Sbjct: 435 NPFHHHQDLNRLKKAFAAVDTLVVHELAWTATARHADIVLPCTMTLERDDIGGSSNDPLL 494 Query: 274 VAMHRIAEPFGLARDDYEIFADLAERLGAREPFTEGRTSRQWLEHLFEPTRKALAARGLE 333 V M +IA P+G ARDD+ IFADLAERLGAR+ FTEGRT RQWLEHL+EPTR L L Sbjct: 495 VPMRQIAPPYGEARDDFAIFADLAERLGARDAFTEGRTVRQWLEHLYEPTRLGLVQLNLP 554 Query: 334 APSFEEFWARGSLVVPQHLDDGGSLRRFREDPLARPLPTPSGRIEIFSQKIASHGDADCP 393 APSFE+FW ++VPQ DDGG+LR FREDPLA PL TPSG++EIFS+ IAS G+ADCP Sbjct: 555 APSFEDFWESSGILVPQGPDDGGNLRAFREDPLASPLETPSGKLEIFSETIASFGEADCP 614 Query: 394 GHPVWLEKTDTPTSGAPCFLVANQPVTRLHSQLDFGGHSLDAKHRGREVARMNPRDAKPR 453 GHP WL PT AP LV+NQP TRLHSQLDFGGHS KHRGRE+A M+P+DA R Sbjct: 615 GHPAWLGSGYLPTESAPLVLVSNQPRTRLHSQLDFGGHSGSGKHRGREIASMHPKDAAER 674 Query: 454 GIADGDIIRIFNARGACLAAVHVTDGIAPGVVQLPTGAWYDPMDPEEEAPLCVHGNPNVL 513 GIADGDI+R+FN RGACLAA+ +T+ I PGV+QLPTGAWYDP DP EE LCVHGNPNVL Sbjct: 675 GIADGDIVRLFNERGACLAAIALTEDIRPGVIQLPTGAWYDPADPTEEKTLCVHGNPNVL 734 Query: 514 TRDIGTSSFAQGCTGQLTSVEVERFNGNLPPIRAFDP 550 T D+GTS+ AQGCTGQLT+VEVERF+GNLPPIRA+DP Sbjct: 735 TEDVGTSALAQGCTGQLTTVEVERFDGNLPPIRAYDP 771 >ref|NP_884404.1| putative biotin sulfoxide reductase [Bordetella parapertussis 12822] ref|NP_888090.1| biotin sulfoxide reductase [Bordetella bronchiseptica RB50] emb|CAE32042.1| Putative biotin sulfoxide reductase [Bordetella bronchiseptica RB50] emb|CAE37448.1| Putative biotin sulfoxide reductase [Bordetella parapertussis] Length = 779 Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/516 (68%), Positives = 401/516 (77%) Query: 35 ALMLGIVHTLVSEGLHDQAFLDRYTEGWPVFLRYLTGESDGVSKNAEWAAAICGIEAGII 94 ALML ++H LV EGLHD+AF+ RY GW F YL G +DG KN WAAA+ G+ I Sbjct: 257 ALMLALLHVLVDEGLHDRAFVARYCAGWETFEDYLMGRADGQPKNPAWAAALTGLAEADI 316 Query: 95 RALARRLAGRRALITVSHSLQRAEHGEQPVWMGMVLAAALGQIGLPGGGYAYSLGAIGYY 154 ALAR L RR L+ VSHSLQRAEHGEQPVW+G VLAAALGQ+GLPGGGY Y+LG + +Y Sbjct: 317 AALARMLPSRRVLVVVSHSLQRAEHGEQPVWLGAVLAAALGQVGLPGGGYNYALGTLAHY 376 Query: 155 GRRVNAVPGPTLGQGRNGVADFIPVARIADMLLNPGTTYRYNGETRTYPDIRLVYWAGGN 214 G+R NAVP L QGRNGV +IPVARIADMLL PG + YNG+ YP +RL YWAGGN Sbjct: 377 GKRNNAVPIAALPQGRNGVDAYIPVARIADMLLKPGEPFDYNGQRLRYPHVRLAYWAGGN 436 Query: 215 PFHHHQDLNRLRKAFARLDTLVVHELAWTATARHADIVLPSTMTLEREDIGYSSNDPLMV 274 PFHHHQDL RLR AF RLDTL+VHE WTATARHADIVLP TMTLEREDIG + DPL+V Sbjct: 437 PFHHHQDLARLRAAFRRLDTLIVHETVWTATARHADIVLPCTMTLEREDIGGTPTDPLLV 496 Query: 275 AMHRIAEPFGLARDDYEIFADLAERLGAREPFTEGRTSRQWLEHLFEPTRKALAARGLEA 334 AMHR+A P GLARDDY+IFADLA RL R FTEGR SR WL H++E TR ALAARG EA Sbjct: 497 AMHRVAPPVGLARDDYDIFADLAGRLQRRAAFTEGRDSRGWLRHIYETTRAALAARGDEA 556 Query: 335 PSFEEFWARGSLVVPQHLDDGGSLRRFREDPLARPLPTPSGRIEIFSQKIASHGDADCPG 394 P F+ FWARG L +PQ DDGG LR FR+DP RPLPTPSGRI++ S +AS G ADCPG Sbjct: 557 PDFDTFWARGELRLPQADDDGGLLRAFRQDPQGRPLPTPSGRIQVSSPTVASFGYADCPG 616 Query: 395 HPVWLEKTDTPTSGAPCFLVANQPVTRLHSQLDFGGHSLDAKHRGREVARMNPRDAKPRG 454 HP WL D P + P +LVANQP TRLHSQLDFG HS AK GREV +++P DA RG Sbjct: 617 HPAWLAPADAPDAQWPLYLVANQPATRLHSQLDFGAHSAAAKRHGREVCQVHPADAAARG 676 Query: 455 IADGDIIRIFNARGACLAAVHVTDGIAPGVVQLPTGAWYDPMDPEEEAPLCVHGNPNVLT 514 IADGD++R+FNARGACLAA VTD I GVVQLPTGAWYDP D E P+C+HGNPNVLT Sbjct: 677 IADGDVVRLFNARGACLAAARVTDAIMRGVVQLPTGAWYDPQDVHAERPMCMHGNPNVLT 736 Query: 515 RDIGTSSFAQGCTGQLTSVEVERFNGNLPPIRAFDP 550 RD+GTSS AQGCTGQLT+V++ER++G LPP+RA++P Sbjct: 737 RDVGTSSLAQGCTGQLTAVQMERYDGPLPPVRAYEP 772 >ref|ZP_06689786.1| S/N-oxide reductase [Achromobacter piechaudii ATCC 43553] gb|EFF73293.1| S/N-oxide reductase [Achromobacter piechaudii ATCC 43553] Length = 776 Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/518 (65%), Positives = 400/518 (77%), Gaps = 1/518 (0%) Query: 34 TALMLGIVHTLVSEGLHDQAFLDRYTEGWPVFLRYLTGESDGVSKNAEWAAAICGIEAGI 93 ALML +VH LV + LHD+AFL + GW F YL G DG +K+A WAAA+CG+ Sbjct: 253 VALMLALVHELVVKDLHDKAFLAEFCTGWDTFEDYLLGRQDGQAKDAHWAAALCGLTPAH 312 Query: 94 IRALARRLAGRRALITVSHSLQRAEHGEQPVWMGMVLAAALGQIGLPGGGYAYSLGAIGY 153 I +A RL G+R L+TVSHSLQRAEHGEQPVWM VLAAALGQ+GLPGGGYAY+LG + + Sbjct: 313 ILDMAHRLPGKRVLVTVSHSLQRAEHGEQPVWMAAVLAAALGQLGLPGGGYAYALGTLAH 372 Query: 154 YGRRVNAVPGPTLGQGRNGVADFIPVARIADMLLNPGTTYRYNGETRTYPDIRLVYWAGG 213 YG+R NAVP +L QG NGV D+IPVARIADMLL+PG + YNG+ YP IRL YWAGG Sbjct: 373 YGKRSNAVPVASLPQGMNGVKDYIPVARIADMLLHPGQPFDYNGKRMPYPHIRLAYWAGG 432 Query: 214 NPFHHHQDLNRLRKAFARLDTLVVHELAWTATARHADIVLPSTMTLEREDIGYSSNDPLM 273 NPFHHHQDL RL +AFA LDT +VHE+ WTATARHADIVLP TMTLEREDIG + DPL+ Sbjct: 433 NPFHHHQDLKRLTRAFATLDTFIVHEIGWTATARHADIVLPCTMTLEREDIGGAPTDPLL 492 Query: 274 VAMHRIAEPFGLARDDYEIFADLAERLGAREPFTEGRTSRQWLEHLFEPTRKALAARGLE 333 VAMHRIA P G ARDDY+IFADL+ERLG FTEGR+S +WL HL+E TR+ L +GL+ Sbjct: 493 VAMHRIAAPNGQARDDYDIFADLSERLGTHAEFTEGRSSGEWLRHLYEKTRQGLQDKGLD 552 Query: 334 APSFEEFWARGSLVVPQHLDDGGSLRRFREDPLARPLPTPSGRIEIFSQKIASHGDADCP 393 APSF+ FW RG L +PQ DDGG LR FR+DP +PLPTP+G+++I S IA G ADCP Sbjct: 553 APSFDAFWERGELTLPQQDDDGGILRAFRDDPAGKPLPTPTGKVQISSPVIAGFGYADCP 612 Query: 394 GHPVWLEKTDTPTSGAPCFLVANQPVTRLHSQLDFGGHSLDAKHRGREVARMNPRDAKPR 453 GHP WL D PT P FLVANQP TRLHSQ DFG HS+ K +GREV ++P+DA R Sbjct: 613 GHPAWLPPQDAPTPKHPLFLVANQPATRLHSQFDFGAHSVSQKRQGREVCTLHPQDAAAR 672 Query: 454 GIADGDIIRIFNARGACLAAVHVTDGIAPGVVQLPTGAWYDPM-DPEEEAPLCVHGNPNV 512 GI DGDI+R+FNARGACLA+ ++ + PGVVQLPTGAWYDP+ D LC HGNPN+ Sbjct: 673 GIGDGDIVRLFNARGACLASATLSTAVMPGVVQLPTGAWYDPVFDASGNVTLCGHGNPNI 732 Query: 513 LTRDIGTSSFAQGCTGQLTSVEVERFNGNLPPIRAFDP 550 LTRD+GTSS AQGC+GQLT+VE+ER++G LPP+RAFDP Sbjct: 733 LTRDVGTSSLAQGCSGQLTAVEIERYDGELPPLRAFDP 770 >gb|EGP47280.1| molybdopterin oxidoreductase [Achromobacter xylosoxidans AXX-A] Length = 781 Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/517 (66%), Positives = 400/517 (77%), Gaps = 1/517 (0%) Query: 34 TALMLGIVHTLVSEGLHDQAFLDRYTEGWPVFLRYLTGESDGVSKNAEWAAAICGIEAGI 93 ALML +VH LV+ G HDQAFL + EGW F YL G +DG +K+ WAA ICG+ A Sbjct: 253 VALMLALVHELVANGWHDQAFLRDFCEGWDGFEDYLMGRADGQAKDPAWAAPICGVPAAD 312 Query: 94 IRALARRLAGRRALITVSHSLQRAEHGEQPVWMGMVLAAALGQIGLPGGGYAYSLGAIGY 153 I +AR L G+R L+TV+HSLQRAEHGEQPVWMG VLAAALGQ+GLPGGGYAY+LG + + Sbjct: 313 IARIARSLPGKRVLVTVAHSLQRAEHGEQPVWMGAVLAAALGQLGLPGGGYAYALGTLAH 372 Query: 154 YGRRVNAVPGPTLGQGRNGVADFIPVARIADMLLNPGTTYRYNGETRTYPDIRLVYWAGG 213 YG+R NAVP +L QG NGV FIPVARIADMLL+PG + YNG+ YP IRL YWAGG Sbjct: 373 YGKRSNAVPVASLPQGVNGVKAFIPVARIADMLLHPGEPFDYNGKRMDYPHIRLAYWAGG 432 Query: 214 NPFHHHQDLNRLRKAFARLDTLVVHELAWTATARHADIVLPSTMTLEREDIGYSSNDPLM 273 NPFHH QDL RL +AFA LDT VVHE+ WTATARHADIVLP TMTLEREDIG + DPL+ Sbjct: 433 NPFHHRQDLKRLSRAFATLDTFVVHEIGWTATARHADIVLPCTMTLEREDIGGAPTDPLL 492 Query: 274 VAMHRIAEPFGLARDDYEIFADLAERLGAREPFTEGRTSRQWLEHLFEPTRKALAARGLE 333 VAMHRIA P GLARDDY+IFADLAERLG RE FTEGR+S +WL HL+E TR AL +GLE Sbjct: 493 VAMHRIAAPNGLARDDYDIFADLAERLGTREAFTEGRSSGEWLRHLYERTRAALEEKGLE 552 Query: 334 APSFEEFWARGSLVVPQHLDDGGSLRRFREDPLARPLPTPSGRIEIFSQKIASHGDADCP 393 AP F++FW RG L +PQ DDGG LR FR DP +PLPTPSG+++I S +A G DCP Sbjct: 553 APDFDQFWTRGELTLPQQDDDGGILRAFRGDPAGKPLPTPSGKVQISSPTVAGFGYPDCP 612 Query: 394 GHPVWLEKTDTPTSGAPCFLVANQPVTRLHSQLDFGGHSLDAKHRGREVARMNPRDAKPR 453 GHP WL D PT P FLVANQP TRLHSQLDFG HS K +GREV ++P DA R Sbjct: 613 GHPAWLAPQDAPTPAHPLFLVANQPATRLHSQLDFGAHSASQKRQGREVCTLHPDDAAAR 672 Query: 454 GIADGDIIRIFNARGACLAAVHVTDGIAPGVVQLPTGAWYDPM-DPEEEAPLCVHGNPNV 512 GIA+GDI+R+FN RGACLA+ +++ I PGV QLPTGAWYDP+ D E LC HGNPN+ Sbjct: 673 GIAEGDIVRLFNERGACLASATLSEAIMPGVAQLPTGAWYDPVRDERGEVTLCGHGNPNI 732 Query: 513 LTRDIGTSSFAQGCTGQLTSVEVERFNGNLPPIRAFD 549 LTRD+GTSS AQGC+GQLT+V+VER++G LPP+RAFD Sbjct: 733 LTRDVGTSSLAQGCSGQLTAVQVERYDGVLPPMRAFD 769