BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0134.0027.p (466 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767089.1| dihydrolipoamide dehydrogenase [Bradyrhizobium ... 874 0.0 ref|YP_575887.1| dihydrolipoamide dehydrogenase [Nitrobacter ham... 858 0.0 ref|YP_001236591.1| dihydrolipoamide dehydrogenase [Bradyrhizobi... 839 0.0 ref|YP_317044.1| dihydrolipoamide dehydrogenase [Nitrobacter win... 837 0.0 ref|YP_001202603.1| dihydrolipoamide dehydrogenase [Bradyrhizobi... 835 0.0 >ref|NP_767089.1| dihydrolipoamide dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC45714.1| dihydrolipoamide dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 466 Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/466 (91%), Positives = 455/466 (97%) Query: 1 MASYDLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASEMF 60 MA+YDLVVIGTGPGGYVCA+RAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASEMF Sbjct: 1 MATYDLVVIGTGPGGYVCAVRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASEMF 60 Query: 61 EEAAHSFAKMGVSVPAPKLDLPAMMNFKQQGIDGNVKGVEFLMKKNKIDVLKGTGKILGA 120 EEAAHSFAKMGVSV PKL+LPAMMNFKQQGIDGNVKGVEFLMKKNKIDVLKGTGKILG Sbjct: 61 EEAAHSFAKMGVSVSEPKLELPAMMNFKQQGIDGNVKGVEFLMKKNKIDVLKGTGKILGT 120 Query: 121 GKVEVSGDGKTETVETRNIVIATGSDIARLKGIDIDEKRIVSSTGALSLEKVPEKLLIIG 180 GKVEVS DGK++ VET++IVIATGSDIARLKGI+IDEKRIVSSTGALSL+KVP KLL++G Sbjct: 121 GKVEVSADGKSQVVETKSIVIATGSDIARLKGIEIDEKRIVSSTGALSLDKVPGKLLVVG 180 Query: 181 AGVIGLELGSVWRRLGADVMVVEFLDRILPGMDGEVAKQFQRMLEKQGFVFKLGAKVTAV 240 AGVIGLELGSVW+RLGA+V+VVEFLDRI+PGMDGE+AKQFQR+LEKQGF FKLGAKVTAV Sbjct: 181 AGVIGLELGSVWKRLGAEVVVVEFLDRIMPGMDGEIAKQFQRILEKQGFAFKLGAKVTAV 240 Query: 241 DTSGKTLQVKVEPASGGAAESIEADVVLVCIGRVPYTEGLGLKEAGVALDNRGRVEIDAH 300 DTSGKTL+ +EPA+GGAAE++EADVVLVCIGRVPYT+GLGLKEAGVALDNRGRV+ID H Sbjct: 241 DTSGKTLKATIEPAAGGAAETLEADVVLVCIGRVPYTDGLGLKEAGVALDNRGRVQIDPH 300 Query: 301 FSTNVKGIYAIGDVVAGPMLAHKAEDEGVACAEIIAGQAGHVNYDVIPGVVYTTPEVSSV 360 F+T++KG+YAIGDVVAGPMLAHKAEDEGVA AEIIAGQAGHVNYDVIPGVVYTTPEVSSV Sbjct: 301 FATSLKGVYAIGDVVAGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTTPEVSSV 360 Query: 361 GKTEEDLKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIVGREAGE 420 GKTEE+LKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHI+GREAGE Sbjct: 361 GKTEEELKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIIGREAGE 420 Query: 421 MIHEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM 466 MIHEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM Sbjct: 421 MIHEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM 466 >ref|YP_575887.1| dihydrolipoamide dehydrogenase [Nitrobacter hamburgensis X14] gb|ABE61427.1| dihydrolipoamide dehydrogenase [Nitrobacter hamburgensis X14] Length = 480 Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/467 (90%), Positives = 445/467 (95%), Gaps = 1/467 (0%) Query: 1 MASYDLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASEMF 60 MA+YDL+VIGTGPGGYVCAIRAAQ GMKVAVVEKN TLGGTCLNVGCMPSKALLHASEMF Sbjct: 14 MATYDLIVIGTGPGGYVCAIRAAQFGMKVAVVEKNPTLGGTCLNVGCMPSKALLHASEMF 73 Query: 61 EEAAHSFAKMGVSVPAPKLDLPAMMNFKQQGIDGNVKGVEFLMKKNKIDVLKGTGKILGA 120 EEA HSFAKMG+ V AP+LDL AMMNFKQQGIDGNVKGVEFLMKKNKIDV+ GTG+ILGA Sbjct: 74 EEAGHSFAKMGIGVSAPRLDLAAMMNFKQQGIDGNVKGVEFLMKKNKIDVISGTGRILGA 133 Query: 121 GKVEVSG-DGKTETVETRNIVIATGSDIARLKGIDIDEKRIVSSTGALSLEKVPEKLLII 179 GKVEV+G DGK +T+ET+NIVIATGSD+A+LK I+IDEKRIVSSTGALSL KVP KLLI+ Sbjct: 134 GKVEVTGNDGKKQTLETKNIVIATGSDVAKLKDIEIDEKRIVSSTGALSLAKVPGKLLIV 193 Query: 180 GAGVIGLELGSVWRRLGADVMVVEFLDRILPGMDGEVAKQFQRMLEKQGFVFKLGAKVTA 239 GAGVIGLELGSVW RLGA V VVEFLDRILPGMDGEVAKQFQRMLEKQGF FKLGAKVT Sbjct: 194 GAGVIGLELGSVWHRLGAQVTVVEFLDRILPGMDGEVAKQFQRMLEKQGFAFKLGAKVTG 253 Query: 240 VDTSGKTLQVKVEPASGGAAESIEADVVLVCIGRVPYTEGLGLKEAGVALDNRGRVEIDA 299 VDTSGKTL KVEPA+GGAAE+IEADVVLV IGR PYT+GLGLKEAGVALD+RGRVEIDA Sbjct: 254 VDTSGKTLTAKVEPAAGGAAETIEADVVLVAIGRTPYTDGLGLKEAGVALDDRGRVEIDA 313 Query: 300 HFSTNVKGIYAIGDVVAGPMLAHKAEDEGVACAEIIAGQAGHVNYDVIPGVVYTTPEVSS 359 HF+TNVKG+YAIGDVVAGPMLAHKAEDEGVACAEI+AGQAGHVNYDVIPGV+YTTPEVSS Sbjct: 314 HFATNVKGVYAIGDVVAGPMLAHKAEDEGVACAEILAGQAGHVNYDVIPGVIYTTPEVSS 373 Query: 360 VGKTEEDLKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIVGREAG 419 VGKTEE+LKQAG AYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHI+GREAG Sbjct: 374 VGKTEEELKQAGTAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIIGREAG 433 Query: 420 EMIHEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM 466 EMIHEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM Sbjct: 434 EMIHEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM 480 >ref|YP_001236591.1| dihydrolipoamide dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ32685.1| dihydrolipoamide dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 467 Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/467 (87%), Positives = 441/467 (94%), Gaps = 1/467 (0%) Query: 1 MASYDLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASEMF 60 MA+YDLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASE+F Sbjct: 1 MANYDLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASELF 60 Query: 61 EEAAHSFAKMGVSVPAPKLDLPAMMNFKQQGIDGNVKGVEFLMKKNKIDVLKGTGKILGA 120 EEA HSFAKMG+ VPAP++DLPAMMNFKQQGIDGNVKGVEFLMKKNKIDVL+G GKILG Sbjct: 61 EEAGHSFAKMGIKVPAPEIDLPAMMNFKQQGIDGNVKGVEFLMKKNKIDVLQGKGKILGT 120 Query: 121 GKVEVSG-DGKTETVETRNIVIATGSDIARLKGIDIDEKRIVSSTGALSLEKVPEKLLII 179 GKV+V+G DG +TVET+NIVIATGSDIARLKGI+IDEKRIVSSTGALSL+K+P LL++ Sbjct: 121 GKVQVTGNDGTAQTVETKNIVIATGSDIARLKGIEIDEKRIVSSTGALSLDKIPSSLLVV 180 Query: 180 GAGVIGLELGSVWRRLGADVMVVEFLDRILPGMDGEVAKQFQRMLEKQGFVFKLGAKVTA 239 GAGVIGLELGSVWRRLGA V VVEFLDRILPGMD E+AKQFQR+LEKQGF FKLGAKVT Sbjct: 181 GAGVIGLELGSVWRRLGAKVTVVEFLDRILPGMDLEIAKQFQRILEKQGFAFKLGAKVTG 240 Query: 240 VDTSGKTLQVKVEPASGGAAESIEADVVLVCIGRVPYTEGLGLKEAGVALDNRGRVEIDA 299 VDTSG TL +EPA+GGAAE IEADVVLV IGRVPYT+GLGL+EAGV LDNRGRV+ID Sbjct: 241 VDTSGATLAATIEPAAGGAAEKIEADVVLVAIGRVPYTDGLGLQEAGVVLDNRGRVQIDH 300 Query: 300 HFSTNVKGIYAIGDVVAGPMLAHKAEDEGVACAEIIAGQAGHVNYDVIPGVVYTTPEVSS 359 HF+T+V G+YAIGDVVAGPMLAHKAEDEGVA AEI+AGQAGHVNYDVIPGVVYTTPEV+S Sbjct: 301 HFATSVPGVYAIGDVVAGPMLAHKAEDEGVAVAEILAGQAGHVNYDVIPGVVYTTPEVAS 360 Query: 360 VGKTEEDLKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIVGREAG 419 VGKTE++LKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLG HI+GREAG Sbjct: 361 VGKTEDELKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGAHIIGREAG 420 Query: 420 EMIHEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM 466 E+IHEA VLMEFGGSAEDLARTCHAHPTRSEA+KEAALAVGKRAIHM Sbjct: 421 ELIHEAAVLMEFGGSAEDLARTCHAHPTRSEAVKEAALAVGKRAIHM 467 >ref|YP_317044.1| dihydrolipoamide dehydrogenase [Nitrobacter winogradskyi Nb-255] gb|ABA03692.1| dihydrolipoamide dehydrogenase [Nitrobacter winogradskyi Nb-255] Length = 467 Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/467 (86%), Positives = 440/467 (94%), Gaps = 1/467 (0%) Query: 1 MASYDLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASEMF 60 M +YDL++IGTGPGGYVCA+RAAQLGMKVAVVEKN TLGGTCLNVGCMPSKALLHASE F Sbjct: 1 MTTYDLIIIGTGPGGYVCAVRAAQLGMKVAVVEKNPTLGGTCLNVGCMPSKALLHASEAF 60 Query: 61 EEAAHSFAKMGVSVPAPKLDLPAMMNFKQQGIDGNVKGVEFLMKKNKIDVLKGTGKILGA 120 +EA HSFA+MG+ V APKLDL AMM+FKQQGIDGNVKGVE+LMKKNKIDVL+G G+++ A Sbjct: 61 QEAGHSFARMGIGVSAPKLDLSAMMDFKQQGIDGNVKGVEYLMKKNKIDVLRGAGRVVAA 120 Query: 121 GKVEVSG-DGKTETVETRNIVIATGSDIARLKGIDIDEKRIVSSTGALSLEKVPEKLLII 179 G+VEV+G DGK +T ET+NIVIATGSD A+LKG++IDEKRIVSSTGALSL+KVPEKLL++ Sbjct: 121 GQVEVTGKDGKIQTAETKNIVIATGSDAAKLKGVEIDEKRIVSSTGALSLDKVPEKLLVV 180 Query: 180 GAGVIGLELGSVWRRLGADVMVVEFLDRILPGMDGEVAKQFQRMLEKQGFVFKLGAKVTA 239 GAGVIGLELGSVWRRLGA V VVEFLDRILPGMDGE+AKQFQR+LEKQGF FKLGAKVT Sbjct: 181 GAGVIGLELGSVWRRLGAQVTVVEFLDRILPGMDGEIAKQFQRILEKQGFAFKLGAKVTG 240 Query: 240 VDTSGKTLQVKVEPASGGAAESIEADVVLVCIGRVPYTEGLGLKEAGVALDNRGRVEIDA 299 VDTSGKTL ++EPA+GGAAE+IEADVVLV IGR PYT GLGLKEAGVALD+RGRVEID Sbjct: 241 VDTSGKTLSARIEPAAGGAAETIEADVVLVAIGRAPYTNGLGLKEAGVALDDRGRVEIDK 300 Query: 300 HFSTNVKGIYAIGDVVAGPMLAHKAEDEGVACAEIIAGQAGHVNYDVIPGVVYTTPEVSS 359 HF+T+VKGIYAIGDVV GPMLAHKA DEGVACAEI+AGQAGHVNYDVIPGV+YTTPEVSS Sbjct: 301 HFATSVKGIYAIGDVVRGPMLAHKAADEGVACAEILAGQAGHVNYDVIPGVIYTTPEVSS 360 Query: 360 VGKTEEDLKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIVGREAG 419 VGKTEE+LKQAG AY VGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHI+GREAG Sbjct: 361 VGKTEEELKQAGTAYAVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIIGREAG 420 Query: 420 EMIHEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM 466 E+IHEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM Sbjct: 421 ELIHEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM 467 >ref|YP_001202603.1| dihydrolipoamide dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL74357.1| dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes [Bradyrhizobium sp. ORS 278] Length = 467 Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/467 (86%), Positives = 440/467 (94%), Gaps = 1/467 (0%) Query: 1 MASYDLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASEMF 60 MA+YDLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASE+F Sbjct: 1 MATYDLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASELF 60 Query: 61 EEAAHSFAKMGVSVPAPKLDLPAMMNFKQQGIDGNVKGVEFLMKKNKIDVLKGTGKILGA 120 EEA HSFAKMG+ V AP++DLP+MMNFKQQGIDGNVKGVEFLMKKNKIDVL+G GKILG Sbjct: 61 EEAGHSFAKMGIKVSAPEVDLPSMMNFKQQGIDGNVKGVEFLMKKNKIDVLQGKGKILGT 120 Query: 121 GKVEVSG-DGKTETVETRNIVIATGSDIARLKGIDIDEKRIVSSTGALSLEKVPEKLLII 179 GKV+V+G DG +TVET+NIVIATGSDIARLKGI+IDEKRIVSSTGAL+L+KVP LL++ Sbjct: 121 GKVQVTGNDGAAQTVETKNIVIATGSDIARLKGIEIDEKRIVSSTGALALDKVPSSLLVV 180 Query: 180 GAGVIGLELGSVWRRLGADVMVVEFLDRILPGMDGEVAKQFQRMLEKQGFVFKLGAKVTA 239 GAGVIGLELGSVWRRLGA V VVEFLDRILPGMD E+AKQFQR+LEKQGF FKLGAKVT Sbjct: 181 GAGVIGLELGSVWRRLGAKVTVVEFLDRILPGMDLEIAKQFQRILEKQGFAFKLGAKVTG 240 Query: 240 VDTSGKTLQVKVEPASGGAAESIEADVVLVCIGRVPYTEGLGLKEAGVALDNRGRVEIDA 299 VDTSG L +EPA+GGAAE I+ADVVLV IGRVPYT+GLGL+EAGVALDNRGRV+ID Sbjct: 241 VDTSGAKLSATIEPAAGGAAEKIDADVVLVAIGRVPYTDGLGLQEAGVALDNRGRVQIDH 300 Query: 300 HFSTNVKGIYAIGDVVAGPMLAHKAEDEGVACAEIIAGQAGHVNYDVIPGVVYTTPEVSS 359 HF+T+V G+YAIGDVVAGPMLAHKAEDEGVACAEI+AGQAGHVNYDVIPGVVYTTPEV+S Sbjct: 301 HFATSVPGVYAIGDVVAGPMLAHKAEDEGVACAEILAGQAGHVNYDVIPGVVYTTPEVAS 360 Query: 360 VGKTEEDLKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIVGREAG 419 VGKTE++LKQAG+ YTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLG HI+GREAG Sbjct: 361 VGKTEDELKQAGIVYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGAHIIGREAG 420 Query: 420 EMIHEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM 466 EMIHEA VLMEFGGSAEDLARTCHAHPTRSEA+KEAALAVGKRAIHM Sbjct: 421 EMIHEAAVLMEFGGSAEDLARTCHAHPTRSEAVKEAALAVGKRAIHM 467