BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0134.0023.p (736 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767085.1| primosome assembly protein PriA [Bradyrhizobium... 1281 0.0 ref|YP_001202607.1| primosome assembly protein PriA [Bradyrhizob... 1263 0.0 ref|ZP_08627742.1| helicase PriA [Bradyrhizobiaceae bacterium SG... 1260 0.0 ref|YP_001989214.1| primosome assembly protein PriA [Rhodopseudo... 1256 0.0 ref|YP_483892.1| primosome assembly protein PriA [Rhodopseudomon... 1255 0.0 >ref|NP_767085.1| primosome assembly protein PriA [Bradyrhizobium japonicum USDA 110] dbj|BAC45710.1| primosomal protein N' [Bradyrhizobium japonicum USDA 110] Length = 736 Score = 1281 bits (3314), Expect = 0.0, Method: Compositional matrix adjust. Identities = 634/736 (86%), Positives = 687/736 (93%) Query: 1 MDHTTRLGPASASTTRVVDVLVPVALNQTYSYRVPRGMELAPGDVIGVPLGPREVVAVVW 60 MDHT+R ASA+ TR+VDVLVPVAL+QTYSY+VPRGMEL GD++GVPLGPREV+AVVW Sbjct: 1 MDHTSRSSTASANATRMVDVLVPVALDQTYSYKVPRGMELKAGDLVGVPLGPREVLAVVW 60 Query: 61 AENANPDPRLHNRLKDVSEKLDVPPLRPELRQLVDWVSNYTLSARGMVLRMTLRMGDNLG 120 AENANPDPRLHNRLK+VSEKLD+ PL+PELR +VDWV+NYTLS RGMVLRM LRMG+NLG Sbjct: 61 AENANPDPRLHNRLKEVSEKLDLQPLKPELRSVVDWVANYTLSPRGMVLRMCLRMGENLG 120 Query: 121 PERTRLGVRLVGEPPRRLTPARRRVIEVLSDRLLHGKSEAAREAGVSSGVIDGLVDEGTL 180 PER R GVRL+G+PPRRLTPAR+RVI VLSDRLLHGKSEAA+EAGVS+GVIDGLVDEGTL Sbjct: 121 PERVRPGVRLIGDPPRRLTPARQRVIAVLSDRLLHGKSEAAKEAGVSAGVIDGLVDEGTL 180 Query: 181 TVEAMPPPAPPPVPDPSYAQPDFSREQRSAVDVMRALAASGSFHVALLDGVTGSGKTEVY 240 TVE MPPP PPP PDP + +PDF+ QR+AVD MRALAA+G+FHVALLDGVTGSGKTEVY Sbjct: 181 TVEPMPPPPPPPAPDPDFGRPDFTPLQRTAVDTMRALAANGTFHVALLDGVTGSGKTEVY 240 Query: 241 FEAIAENIRRGRQTLILMPEIALTGQFLDRFAQRFGARPLEWHSELTPRTRARNWAAISE 300 FEA+AE IRRGRQ+LILMPEIALTGQFLDRFAQRFG RP+EWHSELTPRTRARNWAAISE Sbjct: 241 FEAVAEAIRRGRQSLILMPEIALTGQFLDRFAQRFGVRPIEWHSELTPRTRARNWAAISE 300 Query: 301 GKAPVVVGARSALFLPYADLGLIIVDEEHDQAYKQDDGAHYHARDMAVVRAHIAKIPIVL 360 G APVVVGARSALFLPYA+LGLI+VDEEHDQAYKQD+G HYHARDMAVVRAHIAKIPIVL Sbjct: 301 GSAPVVVGARSALFLPYANLGLIVVDEEHDQAYKQDEGVHYHARDMAVVRAHIAKIPIVL 360 Query: 361 ASATPSVESEVNARKGRYQRVALPSRFGGQHMPHIEAIDMRRAPPPRGRFISPVLAEQIR 420 ASATPSVESEVNARK RYQR+ALPSRFGGQHMPHIEAIDMRR PP RGRFISP LA +IR Sbjct: 361 ASATPSVESEVNARKNRYQRIALPSRFGGQHMPHIEAIDMRREPPARGRFISPRLAGEIR 420 Query: 421 HAIERREQALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMPR 480 AIERREQALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMPR Sbjct: 421 TAIERREQALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMPR 480 Query: 481 PNICPHCAAEESLVAVGPGVERLQEEAAHIFPEARTMVLSSDLITSIETMRSELNEIAEG 540 P++CP+C+AEESLVAVGPGVERLQEEAA +FPEARTMVLSSDLITSIETMRSEL EIAEG Sbjct: 481 PHVCPNCSAEESLVAVGPGVERLQEEAAALFPEARTMVLSSDLITSIETMRSELAEIAEG 540 Query: 541 RVDIIIGTQLVAKGHNFPRLNLVGVIDADLGLSNGDPRAAERTFQLLNQVVGRAGREQGR 600 RVDIIIGTQLVAKGHNFPRLNLVGV+DADLGLSNGDPRAAERT+QLLNQV+GRAGREQGR Sbjct: 541 RVDIIIGTQLVAKGHNFPRLNLVGVVDADLGLSNGDPRAAERTWQLLNQVIGRAGREQGR 600 Query: 601 GVGFLQTHQPEHPVIKALIANDREAFYASEIEIRERTGYPPFGRLASLIVSAGDRPTAEG 660 GVG+LQTHQP+HPV+KALIA DREAFY SEI++RERT YPPFGRLASLI+SAGDRP+AEG Sbjct: 601 GVGYLQTHQPDHPVMKALIACDREAFYDSEIDLRERTLYPPFGRLASLIISAGDRPSAEG 660 Query: 661 FARKLAAVAPLDERIQVLGPAEAPLAVVKGRYRFRLLVKSLRNVDLSQYLREWLAAGPKT 720 F R+L A+AP DER+ VLGPAEAPLAV+KGRYRFR+LVKS R DLS YLR WLA PK Sbjct: 661 FGRRLVALAPRDERVVVLGPAEAPLAVIKGRYRFRILVKSARGFDLSDYLRNWLAVCPKP 720 Query: 721 KGNLKLEVDVDPQSFL 736 KGN KLEVDVDPQSFL Sbjct: 721 KGNQKLEVDVDPQSFL 736 >ref|YP_001202607.1| primosome assembly protein PriA [Bradyrhizobium sp. ORS 278] emb|CAL74361.1| Primosomal protein N' (replication factor Y) [Bradyrhizobium sp. ORS 278] Length = 736 Score = 1263 bits (3269), Expect = 0.0, Method: Compositional matrix adjust. Identities = 616/736 (83%), Positives = 667/736 (90%) Query: 1 MDHTTRLGPASASTTRVVDVLVPVALNQTYSYRVPRGMELAPGDVIGVPLGPREVVAVVW 60 MD T L P + S VVDVLVPVAL+ TYSYRVPRGM L PGDV+GVPLGPREV+AVVW Sbjct: 1 MDRPTDLFPGATSAAGVVDVLVPVALDHTYSYRVPRGMALKPGDVVGVPLGPREVLAVVW 60 Query: 61 AENANPDPRLHNRLKDVSEKLDVPPLRPELRQLVDWVSNYTLSARGMVLRMTLRMGDNLG 120 AENANPDPRLHNRLKDVSEKLDVPPL+PELR LVDWV+NYTLS RGMVLRM LRMG++LG Sbjct: 61 AENANPDPRLHNRLKDVSEKLDVPPLKPELRSLVDWVANYTLSPRGMVLRMALRMGEHLG 120 Query: 121 PERTRLGVRLVGEPPRRLTPARRRVIEVLSDRLLHGKSEAAREAGVSSGVIDGLVDEGTL 180 PER RLGVRLVGEPP+RLTPARRRVIE +SD LLHGKS+ RE GVS+ VIDGLVDEGTL Sbjct: 121 PERVRLGVRLVGEPPKRLTPARRRVIEAVSDGLLHGKSDLVREIGVSASVIDGLVDEGTL 180 Query: 181 TVEAMPPPAPPPVPDPSYAQPDFSREQRSAVDVMRALAASGSFHVALLDGVTGSGKTEVY 240 TVEAMP PPP PDPS+AQP+F Q + V+ MRALAA G+F+VALLDGVTGSGKTEVY Sbjct: 181 TVEAMPRVLPPPTPDPSFAQPEFFDAQLAGVEAMRALAACGTFNVALLDGVTGSGKTEVY 240 Query: 241 FEAIAENIRRGRQTLILMPEIALTGQFLDRFAQRFGARPLEWHSELTPRTRARNWAAISE 300 FEA+AE +RRGRQ+LILMPEIALTGQFL+RF++RFG RPLEWHSELTPRTR RNWAAI+ Sbjct: 241 FEAVAETVRRGRQSLILMPEIALTGQFLERFSRRFGVRPLEWHSELTPRTRQRNWAAIAA 300 Query: 301 GKAPVVVGARSALFLPYADLGLIIVDEEHDQAYKQDDGAHYHARDMAVVRAHIAKIPIVL 360 G+APVVVGARSALFLPYADLGLI+VDEEHDQAYKQD+GAHYHARDMAVVR HIAK P+VL Sbjct: 301 GEAPVVVGARSALFLPYADLGLIVVDEEHDQAYKQDEGAHYHARDMAVVRGHIAKFPVVL 360 Query: 361 ASATPSVESEVNARKGRYQRVALPSRFGGQHMPHIEAIDMRRAPPPRGRFISPVLAEQIR 420 ASATPSVE+EVNARKGRYQRVALPSRFGGQHMPHIEAID+RR PPPRGR++SP LA IR Sbjct: 361 ASATPSVETEVNARKGRYQRVALPSRFGGQHMPHIEAIDLRREPPPRGRYVSPRLAGHIR 420 Query: 421 HAIERREQALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMPR 480 AIER EQALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSM R Sbjct: 421 TAIERGEQALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMAR 480 Query: 481 PNICPHCAAEESLVAVGPGVERLQEEAAHIFPEARTMVLSSDLITSIETMRSELNEIAEG 540 P CPHCAAEESLVAVGPGVERLQEEAA +FP+AR+MVLSSDLITSIETMR+EL IAEG Sbjct: 481 PPTCPHCAAEESLVAVGPGVERLQEEAAALFPDARSMVLSSDLITSIETMRAELTAIAEG 540 Query: 541 RVDIIIGTQLVAKGHNFPRLNLVGVIDADLGLSNGDPRAAERTFQLLNQVVGRAGREQGR 600 RVD+IIGTQLVAKGHNFPRLNLVGV+DADLGL NGDPRAAERT+QLLNQV+GRAGREQGR Sbjct: 541 RVDLIIGTQLVAKGHNFPRLNLVGVVDADLGLGNGDPRAAERTWQLLNQVIGRAGREQGR 600 Query: 601 GVGFLQTHQPEHPVIKALIANDREAFYASEIEIRERTGYPPFGRLASLIVSAGDRPTAEG 660 G G+LQTHQPEHPV+KAL+A DREAFY SEIE RERTGYPPFGRLASLI+SAGDRPTAEG Sbjct: 601 GRGYLQTHQPEHPVMKALVACDREAFYTSEIEARERTGYPPFGRLASLIISAGDRPTAEG 660 Query: 661 FARKLAAVAPLDERIQVLGPAEAPLAVVKGRYRFRLLVKSLRNVDLSQYLREWLAAGPKT 720 FAR+L A AP +E + +LGPAEAPLAV+KGRYRFRLL+KS RN DLS YLR WLA K Sbjct: 661 FARRLVASAPREEGVLLLGPAEAPLAVIKGRYRFRLLLKSARNFDLSDYLRHWLAHAEKP 720 Query: 721 KGNLKLEVDVDPQSFL 736 KGNLKLEVDVDPQSFL Sbjct: 721 KGNLKLEVDVDPQSFL 736 >ref|ZP_08627742.1| helicase PriA [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09646.1| helicase PriA [Bradyrhizobiaceae bacterium SG-6C] Length = 713 Score = 1260 bits (3261), Expect = 0.0, Method: Compositional matrix adjust. Identities = 607/713 (85%), Positives = 656/713 (92%) Query: 24 VALNQTYSYRVPRGMELAPGDVIGVPLGPREVVAVVWAENANPDPRLHNRLKDVSEKLDV 83 +ALNQTYSYRVP G+EL PGDV+ VPLGPREV AVVWAEN NPDPRLHNRLKD +KLDV Sbjct: 1 MALNQTYSYRVPDGVELNPGDVVSVPLGPREVTAVVWAENPNPDPRLHNRLKDTGDKLDV 60 Query: 84 PPLRPELRQLVDWVSNYTLSARGMVLRMTLRMGDNLGPERTRLGVRLVGEPPRRLTPARR 143 PPL+PELR VDWV+NYTLSARGMVLRMTLRMG++LGPER +GVRLVG PP+R+T AR Sbjct: 61 PPLKPELRSFVDWVANYTLSARGMVLRMTLRMGEHLGPERVHMGVRLVGTPPQRMTAARH 120 Query: 144 RVIEVLSDRLLHGKSEAAREAGVSSGVIDGLVDEGTLTVEAMPPPAPPPVPDPSYAQPDF 203 RVIEVLSDRLLH KSE A+EAGVS GVIDGLVDEGTL E MP PP PDPS+A+PDF Sbjct: 121 RVIEVLSDRLLHAKSETAKEAGVSPGVIDGLVDEGTLATEPMPRDLAPPAPDPSFAEPDF 180 Query: 204 SREQRSAVDVMRALAASGSFHVALLDGVTGSGKTEVYFEAIAENIRRGRQTLILMPEIAL 263 S EQR A D M+AL A F VALLDGVTGSGKTEVYFEA+AENIRRGRQT+ILMPEIAL Sbjct: 181 SPEQRIAADAMKALVAKNEFQVALLDGVTGSGKTEVYFEAVAENIRRGRQTMILMPEIAL 240 Query: 264 TGQFLDRFAQRFGARPLEWHSELTPRTRARNWAAISEGKAPVVVGARSALFLPYADLGLI 323 TGQFLDRFA RFG RP+EWHSELTPRTRARNWAA++ G+APVVVGARSALFLPYADLGLI Sbjct: 241 TGQFLDRFASRFGVRPIEWHSELTPRTRARNWAAVALGEAPVVVGARSALFLPYADLGLI 300 Query: 324 IVDEEHDQAYKQDDGAHYHARDMAVVRAHIAKIPIVLASATPSVESEVNARKGRYQRVAL 383 IVDEEHDQAYKQD+GAHYHARDMAVVR IAKIP+VL SATPSVESEVNARKGRY+RVAL Sbjct: 301 IVDEEHDQAYKQDEGAHYHARDMAVVRGSIAKIPVVLCSATPSVESEVNARKGRYRRVAL 360 Query: 384 PSRFGGQHMPHIEAIDMRRAPPPRGRFISPVLAEQIRHAIERREQALLFLNRRGYAPLTL 443 PSRFGGQHMP IEAID+RR P RGRFISP LAE+IR AIER+EQALLF+NRRGYAPLTL Sbjct: 361 PSRFGGQHMPQIEAIDLRREGPVRGRFISPRLAEEIRIAIERKEQALLFINRRGYAPLTL 420 Query: 444 CRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMPRPNICPHCAAEESLVAVGPGVERL 503 CRACGHRFACTICDAWLVDHRFRQRLVCHHCGFS PRP+ CPHC AEESL A+GPGVERL Sbjct: 421 CRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSTPRPHQCPHCGAEESLAAIGPGVERL 480 Query: 504 QEEAAHIFPEARTMVLSSDLITSIETMRSELNEIAEGRVDIIIGTQLVAKGHNFPRLNLV 563 QEEAA++FPEARTMVLSSDLIT IETMRSELNEIAEGRVDIIIGTQLVAKGHNFPRLNLV Sbjct: 481 QEEAANLFPEARTMVLSSDLITDIETMRSELNEIAEGRVDIIIGTQLVAKGHNFPRLNLV 540 Query: 564 GVIDADLGLSNGDPRAAERTFQLLNQVVGRAGREQGRGVGFLQTHQPEHPVIKALIANDR 623 GV+DADLGL NGDPRAAERTFQLLNQV+GRAGREQGRGVGFLQTHQPEHPV+KAL+A+DR Sbjct: 541 GVVDADLGLGNGDPRAAERTFQLLNQVIGRAGREQGRGVGFLQTHQPEHPVMKALVASDR 600 Query: 624 EAFYASEIEIRERTGYPPFGRLASLIVSAGDRPTAEGFARKLAAVAPLDERIQVLGPAEA 683 EAFYASEIE RERT YPPFGRLASLI+SAGDRPTAEGFARKLA+ APLDER+QVLGPAEA Sbjct: 601 EAFYASEIEARERTLYPPFGRLASLIISAGDRPTAEGFARKLASAAPLDERVQVLGPAEA 660 Query: 684 PLAVVKGRYRFRLLVKSLRNVDLSQYLREWLAAGPKTKGNLKLEVDVDPQSFL 736 PLAV+KGRYRFR+LVKS+R++DLS Y+R+WL+AGP TKGNLKLEVD+DPQSFL Sbjct: 661 PLAVIKGRYRFRILVKSVRSIDLSAYMRDWLSAGPTTKGNLKLEVDIDPQSFL 713 >ref|YP_001989214.1| primosome assembly protein PriA [Rhodopseudomonas palustris TIE-1] gb|ACE98738.1| primosomal protein N' [Rhodopseudomonas palustris TIE-1] Length = 736 Score = 1256 bits (3250), Expect = 0.0, Method: Compositional matrix adjust. Identities = 613/736 (83%), Positives = 662/736 (89%) Query: 1 MDHTTRLGPASASTTRVVDVLVPVALNQTYSYRVPRGMELAPGDVIGVPLGPREVVAVVW 60 MD PAS + VVDVLVPVA++Q YSYRVPRG+ L PGDV+ VPLG REV+ VVW Sbjct: 1 MDDLPTSSPASHAPASVVDVLVPVAIDQAYSYRVPRGLSLKPGDVVAVPLGAREVLGVVW 60 Query: 61 AENANPDPRLHNRLKDVSEKLDVPPLRPELRQLVDWVSNYTLSARGMVLRMTLRMGDNLG 120 AEN NPDPRLHNRLKDV+EKLDVPPLR ELR++VDWVS YTLSARGMVLRM LRMG++LG Sbjct: 61 AENPNPDPRLHNRLKDVAEKLDVPPLRDELRRMVDWVSTYTLSARGMVLRMCLRMGEHLG 120 Query: 121 PERTRLGVRLVGEPPRRLTPARRRVIEVLSDRLLHGKSEAAREAGVSSGVIDGLVDEGTL 180 PER R+GVRLVG PP+R+TPARRR++++LSD LLHGKS+ A+EAGVS GVIDGLVDEGTL Sbjct: 121 PERQRMGVRLVGSPPQRMTPARRRLLQILSDGLLHGKSDVAKEAGVSPGVIDGLVDEGTL 180 Query: 181 TVEAMPPPAPPPVPDPSYAQPDFSREQRSAVDVMRALAASGSFHVALLDGVTGSGKTEVY 240 VE MP P P PDP +A DFS EQ A + MR L +G F AL+DGVTGSGKTEVY Sbjct: 181 QVEQMPRENPAPEPDPDFAPADFSPEQARAAETMRGLVTAGGFQAALIDGVTGSGKTEVY 240 Query: 241 FEAIAENIRRGRQTLILMPEIALTGQFLDRFAQRFGARPLEWHSELTPRTRARNWAAISE 300 FEA+AE IR+GRQ+LILMPEIALTGQFLDRFAQRFG RPLEWHSELTPRTRARNWA+I+ Sbjct: 241 FEAVAEVIRQGRQSLILMPEIALTGQFLDRFAQRFGVRPLEWHSELTPRTRARNWASIAA 300 Query: 301 GKAPVVVGARSALFLPYADLGLIIVDEEHDQAYKQDDGAHYHARDMAVVRAHIAKIPIVL 360 G+A VVVGARSALFLPYADLGLIIVDEEHDQAYKQ+DGAHYHARDMAVVRA IAKIPIVL Sbjct: 301 GEARVVVGARSALFLPYADLGLIIVDEEHDQAYKQEDGAHYHARDMAVVRASIAKIPIVL 360 Query: 361 ASATPSVESEVNARKGRYQRVALPSRFGGQHMPHIEAIDMRRAPPPRGRFISPVLAEQIR 420 ASATPSVE+EVNARKGRY R+ LPSRFGGQHMP IEAID+RR PP RGRFISP LAEQI Sbjct: 361 ASATPSVETEVNARKGRYTRIPLPSRFGGQHMPQIEAIDLRREPPMRGRFISPRLAEQIG 420 Query: 421 HAIERREQALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMPR 480 AIERREQALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMPR Sbjct: 421 FAIERREQALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMPR 480 Query: 481 PNICPHCAAEESLVAVGPGVERLQEEAAHIFPEARTMVLSSDLITSIETMRSELNEIAEG 540 P CPHC AE SLVAVGPGVERLQEEAA++FP ARTMVLSSDLITSIETMR+ELNEIAEG Sbjct: 481 PPACPHCGAEGSLVAVGPGVERLQEEAANLFPNARTMVLSSDLITSIETMRAELNEIAEG 540 Query: 541 RVDIIIGTQLVAKGHNFPRLNLVGVIDADLGLSNGDPRAAERTFQLLNQVVGRAGREQGR 600 RVDIIIGTQLVAKGHNFPRLNLVGV+DADLGLSNGDPRAAERTFQLLNQV+GRAGR+QGR Sbjct: 541 RVDIIIGTQLVAKGHNFPRLNLVGVVDADLGLSNGDPRAAERTFQLLNQVIGRAGRDQGR 600 Query: 601 GVGFLQTHQPEHPVIKALIANDREAFYASEIEIRERTGYPPFGRLASLIVSAGDRPTAEG 660 GVGFLQTHQPEHPV+KAL+A DREAFYASEI+IRERT YPPFGRLASLI+SAGDRPTAEG Sbjct: 601 GVGFLQTHQPEHPVMKALVACDREAFYASEIDIRERTLYPPFGRLASLIISAGDRPTAEG 660 Query: 661 FARKLAAVAPLDERIQVLGPAEAPLAVVKGRYRFRLLVKSLRNVDLSQYLREWLAAGPKT 720 F R+LA+ AP DER+QVLGPAEAPLAV+KGRYRFRLLVKS+R DLS YLR WLA GPKT Sbjct: 661 FGRQLASAAPFDERVQVLGPAEAPLAVIKGRYRFRLLVKSVRGFDLSNYLRSWLAKGPKT 720 Query: 721 KGNLKLEVDVDPQSFL 736 KGNLKLEVDVDPQSFL Sbjct: 721 KGNLKLEVDVDPQSFL 736 >ref|YP_483892.1| primosome assembly protein PriA [Rhodopseudomonas palustris HaA2] gb|ABD04981.1| replication restart DNA helicase PriA [Rhodopseudomonas palustris HaA2] Length = 735 Score = 1255 bits (3247), Expect = 0.0, Method: Compositional matrix adjust. Identities = 618/729 (84%), Positives = 665/729 (91%), Gaps = 2/729 (0%) Query: 9 PASASTTRVVDVLVPVALNQTYSYRVPRGMELAPGDVIGVPLGPREVVAVVWAENANPDP 68 PAS S RVVDV VPVA++Q YSYRVPRG+EL PGDV+ VPLG REV+ VVWAEN NPDP Sbjct: 8 PASPSAMRVVDVQVPVAIDQAYSYRVPRGLELKPGDVVAVPLGSREVMGVVWAENENPDP 67 Query: 69 RLHNRLKDVSEKLDVPPLRPELRQLVDWVSNYTLSARGMVLRMTLRMGDNLGPERTRLGV 128 RLHNRLKDV+EKLDVPPLR ELR+LVDWV+NYTLS RG VLRMTLRMG+ LGPER R GV Sbjct: 68 RLHNRLKDVAEKLDVPPLREELRRLVDWVANYTLSPRGQVLRMTLRMGE-LGPERVRTGV 126 Query: 129 RLVGEPPRRLTPARRRVIEVLSDRLLHGKSEAAREAGVSSGVIDGLVDEGTLTVEAMPPP 188 RL+G PP+R+TPARRR+IE+LSD LLHGKS+AA+EAG S+GVIDGLVDEGTL+VE MP Sbjct: 127 RLIGPPPQRMTPARRRLIEILSDGLLHGKSDAAKEAGCSAGVIDGLVDEGTLSVEPMPRE 186 Query: 189 APPPVPDPSYAQPDFSREQRSAVDVMRALAASGS-FHVALLDGVTGSGKTEVYFEAIAEN 247 P PDP +A DFS EQ +A + MR L SG F ALLDGVTGSGKTEVYFEA+AE Sbjct: 187 PAAPTPDPDFAPADFSPEQAAAAETMRELVKSGGGFQAALLDGVTGSGKTEVYFEAVAEI 246 Query: 248 IRRGRQTLILMPEIALTGQFLDRFAQRFGARPLEWHSELTPRTRARNWAAISEGKAPVVV 307 IR+GRQTLILMPEIALTGQFLDRFA RFG RPLEWHSELTPRTRARNWAAI+ G+A VVV Sbjct: 247 IRQGRQTLILMPEIALTGQFLDRFALRFGVRPLEWHSELTPRTRARNWAAIAAGEAQVVV 306 Query: 308 GARSALFLPYADLGLIIVDEEHDQAYKQDDGAHYHARDMAVVRAHIAKIPIVLASATPSV 367 GARSALFLPYADLGLIIVDEEHDQAYKQ+DGAHYHARDMAVVRA IAKIPIVLASATPSV Sbjct: 307 GARSALFLPYADLGLIIVDEEHDQAYKQEDGAHYHARDMAVVRASIAKIPIVLASATPSV 366 Query: 368 ESEVNARKGRYQRVALPSRFGGQHMPHIEAIDMRRAPPPRGRFISPVLAEQIRHAIERRE 427 E+EVNARKGRY+R+ LPSRFGGQHMP IEAID+RRAPP RGRFISP LAEQI HAIER E Sbjct: 367 ETEVNARKGRYRRIPLPSRFGGQHMPQIEAIDLRRAPPMRGRFISPPLAEQIGHAIERGE 426 Query: 428 QALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMPRPNICPHC 487 QALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMPRP+ CPHC Sbjct: 427 QALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMPRPHQCPHC 486 Query: 488 AAEESLVAVGPGVERLQEEAAHIFPEARTMVLSSDLITSIETMRSELNEIAEGRVDIIIG 547 AEESLVAVGPGVERLQEEAA +FP+ARTMVLSSDLITSIE MRSELN+IAEGRVDIIIG Sbjct: 487 GAEESLVAVGPGVERLQEEAASLFPQARTMVLSSDLITSIEAMRSELNDIAEGRVDIIIG 546 Query: 548 TQLVAKGHNFPRLNLVGVIDADLGLSNGDPRAAERTFQLLNQVVGRAGREQGRGVGFLQT 607 TQLVAKGHNFPRLNLVGV+DADLGLSNGDPRAAERTFQLLNQV+GRAGR+QGRGVGFLQT Sbjct: 547 TQLVAKGHNFPRLNLVGVVDADLGLSNGDPRAAERTFQLLNQVIGRAGRDQGRGVGFLQT 606 Query: 608 HQPEHPVIKALIANDREAFYASEIEIRERTGYPPFGRLASLIVSAGDRPTAEGFARKLAA 667 HQPEHPV+KAL+A DREAFYASEI+ RERT YPPFGRLASLIVSAGDRP+AEGFARKLA+ Sbjct: 607 HQPEHPVMKALVACDREAFYASEIDARERTLYPPFGRLASLIVSAGDRPSAEGFARKLAS 666 Query: 668 VAPLDERIQVLGPAEAPLAVVKGRYRFRLLVKSLRNVDLSQYLREWLAAGPKTKGNLKLE 727 AP+DER+QVLGPAEAPLAV+KGRYRFRLLVKS+R+ DLS YLR WLA GPKTKGNLKLE Sbjct: 667 CAPVDERVQVLGPAEAPLAVIKGRYRFRLLVKSVRSFDLSNYLRSWLAQGPKTKGNLKLE 726 Query: 728 VDVDPQSFL 736 VDVDPQSFL Sbjct: 727 VDVDPQSFL 735