BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0134.0022.p         (163 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767084.1| hypothetical protein blr044 [Bradyrhizobium jap...   236   8e-61
ref|YP_779224.1| rare lipoprotein A [Rhodopseudomonas palustris ...   220   6e-56
ref|YP_567694.1| rare lipoprotein A [Rhodopseudomonas palustris ...   206   8e-52
ref|YP_483891.1| rare lipoprotein A [Rhodopseudomonas palustris ...   200   6e-50
ref|YP_575884.1| rare lipoprotein A [Nitrobacter hamburgensis X1...   199   1e-49

>ref|NP_767084.1| hypothetical protein blr044 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC45709.1| blr0444 [Bradyrhizobium japonicum USDA 110]
          Length = 165

 Score =  236 bits (602), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 131/166 (78%), Positives = 143/166 (86%), Gaps = 4/166 (2%)

Query: 1   MLNIKKAAGNVTRSRTALAFVAATILVGGSVTEASAKSRHHHHRHHHHHHARAE-GSSWR 59
           ML+ K   G VTR RTA+AF+AAT+ +GG+ TEASAKSRHH H H HH    A  GS WR
Sbjct: 1   MLSFKTL-GTVTRPRTAIAFIAATLFIGGTATEASAKSRHHRHHHRHHAQTDANAGSDWR 59

Query: 60  DANASIQPSGG--HSFSGMASFYGNESGSRTASGQRFNQNAMTAAHRSLPFGTKLRVTHG 117
           +ANA++ PS G  HSFSGMAS+YGNESGSRTASGQRFNQNAMTAAHRSLPFGTKLRVTHG
Sbjct: 60  NANAAMTPSSGTGHSFSGMASYYGNESGSRTASGQRFNQNAMTAAHRSLPFGTKLRVTHG 119

Query: 118 GRSVVVTINDRGPFIRGRVLDLSTGAARAIGLTGAGVGRVTAEVVS 163
           G SV+VTINDRGPFIRGRVLDLSTGAARAIGLTGAGVGRVTAEV+S
Sbjct: 120 GSSVIVTINDRGPFIRGRVLDLSTGAARAIGLTGAGVGRVTAEVIS 165


>ref|YP_779224.1| rare lipoprotein A [Rhodopseudomonas palustris BisA53]
 gb|ABJ04244.1| rare lipoprotein A [Rhodopseudomonas palustris BisA53]
          Length = 159

 Score =  220 bits (560), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 114/163 (69%), Positives = 133/163 (81%), Gaps = 5/163 (3%)

Query: 1   MLNIKKAAGNVT-RSRTALAFVAATILVGGSVTEASAKSRHHHHRHHHHHHARAEGSSWR 59
           M+ +K  A  +T R  TA+A + A++ +GG++TEASAKSR    R HH HH+     SWR
Sbjct: 1   MVRMKTPAPRITTRPTTAMAMIVASVFLGGAITEASAKSRQL--RQHHSHHS--ANDSWR 56

Query: 60  DANASIQPSGGHSFSGMASFYGNESGSRTASGQRFNQNAMTAAHRSLPFGTKLRVTHGGR 119
            ANA++Q  GG SFSGMASFYGNESG+RTASGQRFNQ+A+TAAHRSLPFGTKL+VTHG R
Sbjct: 57  SANAALQSGGGRSFSGMASFYGNESGNRTASGQRFNQHALTAAHRSLPFGTKLKVTHGDR 116

Query: 120 SVVVTINDRGPFIRGRVLDLSTGAARAIGLTGAGVGRVTAEVV 162
           SVVVT+NDRGPFIRGRVLDLSTGAARAIGLT  GVGRV AEV+
Sbjct: 117 SVVVTVNDRGPFIRGRVLDLSTGAARAIGLTSRGVGRVVAEVM 159


>ref|YP_567694.1| rare lipoprotein A [Rhodopseudomonas palustris BisB5]
 gb|ABE37793.1| rare lipoprotein A [Rhodopseudomonas palustris BisB5]
          Length = 159

 Score =  206 bits (525), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 118/164 (71%), Positives = 134/164 (81%), Gaps = 7/164 (4%)

Query: 1   MLNIKKAA-GNVTRSRTALAFVAATILV-GGSVTEASAKSRHHHHRHHHHHHARAEGSSW 58
           M + KK+  G VTR RTA A +AAT+L+ G + TEASA+S+    RHHHH H     + W
Sbjct: 1   MTDTKKSPPGLVTRPRTAFALIAATVLMSGAAATEASARSK----RHHHHAHHNNAQNDW 56

Query: 59  RDANASIQPSGGHSFSGMASFYGNESGSRTASGQRFNQNAMTAAHRSLPFGTKLRVTHGG 118
           RDANA++  SGG SFSG+AS+YGNESG+RTASGQR N NAMTAAHRSLPFGTKLRVTHGG
Sbjct: 57  RDANAALG-SGGRSFSGVASYYGNESGNRTASGQRMNANAMTAAHRSLPFGTKLRVTHGG 115

Query: 119 RSVVVTINDRGPFIRGRVLDLSTGAARAIGLTGAGVGRVTAEVV 162
           RSVVVT+NDRGPFIRGRVLDLSTGAARAIGLT  GVGRV AEV+
Sbjct: 116 RSVVVTVNDRGPFIRGRVLDLSTGAARAIGLTSRGVGRVVAEVM 159


>ref|YP_483891.1| rare lipoprotein A [Rhodopseudomonas palustris HaA2]
 gb|ABD04980.1| rare lipoprotein A [Rhodopseudomonas palustris HaA2]
          Length = 160

 Score =  200 bits (509), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 114/165 (69%), Positives = 133/165 (80%), Gaps = 8/165 (4%)

Query: 1   MLNIKKAA-GNVTRSRTALAFVAATILV-GGSVTEASAKSRHHHHRHHHHHHARAEGSSW 58
           M N KK+  G VTR RT  A +AAT+L+ G ++TEASA+S+  HH   HH       + W
Sbjct: 1   MTNAKKSPPGIVTRPRTTAALIAATVLLSGAAITEASARSKQKHHHQRHHVQ-----NDW 55

Query: 59  RDANASI-QPSGGHSFSGMASFYGNESGSRTASGQRFNQNAMTAAHRSLPFGTKLRVTHG 117
           R+ANA++ +  GG +FSG+AS+YGNESG+RTASGQRFN +AMTAAHRSLPFGTKLRVTHG
Sbjct: 56  RNANATLAEGGGGRTFSGVASYYGNESGNRTASGQRFNASAMTAAHRSLPFGTKLRVTHG 115

Query: 118 GRSVVVTINDRGPFIRGRVLDLSTGAARAIGLTGAGVGRVTAEVV 162
           GRSVVVTINDRGPFIRGRVLDLSTGAARAIGLT  GVGRV AEV+
Sbjct: 116 GRSVVVTINDRGPFIRGRVLDLSTGAARAIGLTSRGVGRVVAEVM 160


>ref|YP_575884.1| rare lipoprotein A [Nitrobacter hamburgensis X14]
 gb|ABE61424.1| rare lipoprotein A [Nitrobacter hamburgensis X14]
          Length = 169

 Score =  199 bits (505), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/164 (72%), Positives = 131/164 (79%), Gaps = 6/164 (3%)

Query: 5   KKAAGNVTRSRTALAFVAATILVGGSVTEASAKSRHHHHRHHHHHHARAE----GSSWRD 60
           K   G + R RT  A +AAT+L+ GSVTEASA+SR+HH  HH   H  A     GSSW +
Sbjct: 6   KSTLGFLIRPRTVAAVIAATVLIAGSVTEASARSRNHHRHHHDRAHHAASHGTAGSSWLN 65

Query: 61  ANASIQPSGG--HSFSGMASFYGNESGSRTASGQRFNQNAMTAAHRSLPFGTKLRVTHGG 118
           ANAS+  S G   SFSG+AS+YG+ESGSRTASGQRFNQNAMTAAHRSLPFGTKLRVTHG 
Sbjct: 66  ANASVGRSAGAGRSFSGVASYYGSESGSRTASGQRFNQNAMTAAHRSLPFGTKLRVTHGS 125

Query: 119 RSVVVTINDRGPFIRGRVLDLSTGAARAIGLTGAGVGRVTAEVV 162
           RSVVVTINDRGPFIRGRVLDLS GAARAIGLTG GVGRV AEV+
Sbjct: 126 RSVVVTINDRGPFIRGRVLDLSKGAARAIGLTGRGVGRVVAEVM 169