BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0134.0012.p (267 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_575876.1| protein of unknown function DUF610, YibQ [Nitro... 436 e-120 ref|NP_767075.1| hypothetical protein blr0435 [Bradyrhizobium ja... 426 e-117 ref|YP_530061.1| hypothetical protein RPC_0167 [Rhodopseudomonas... 418 e-115 ref|YP_001236605.1| hypothetical protein BBta_0413 [Bradyrhizobi... 416 e-114 ref|YP_001202617.1| hypothetical protein BRADO0424 [Bradyrhizobi... 407 e-112 >ref|YP_575876.1| protein of unknown function DUF610, YibQ [Nitrobacter hamburgensis X14] gb|ABE61416.1| protein of unknown function DUF610, YibQ [Nitrobacter hamburgensis X14] Length = 401 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 212/270 (78%), Positives = 235/270 (87%), Gaps = 3/270 (1%) Query: 1 MTGIDPRLLEKSRYGMIPVVA-DGLKPSTVYAA--EADRAKAARMPVVAIVVAGLGVGAA 57 M GIDPRLLEKSRYGMIP VA DGLKP YA +ADRAKAA MPV+AIVV GLGVGAA Sbjct: 132 MAGIDPRLLEKSRYGMIPAVAADGLKPFKAYATGTDADRAKAATMPVIAIVVGGLGVGAA 191 Query: 58 KTTDAIMKLPPAVTLAFTPYGSDPGKLAERARTQRHEILLQIPMEPFDYPDNDPGPQTLL 117 KT DAIMKLPPAVTLAFTPYGSDPGKL E+AR QRHEILLQ+PMEP+DYPDNDPGPQTLL Sbjct: 192 KTADAIMKLPPAVTLAFTPYGSDPGKLVEQARAQRHEILLQVPMEPYDYPDNDPGPQTLL 251 Query: 118 TTLSSEQNLDRFYWHLSRLQGYAGIANFMGGRFVAADPVMQPIVREAAKRGLSYFDDGST 177 TTL +EQN+DR +WHLSR QGY G+ANFMG RFVAA VMQPI+REAAKRGL Y DDGST Sbjct: 252 TTLGTEQNIDRLHWHLSRFQGYVGLANFMGARFVAAATVMQPIIREAAKRGLGYLDDGST 311 Query: 178 PRSVAQTLSAGQSLPFAKADFAIDAVPTSAEIDRALVKLETIAKERGTAVGVASALPVSI 237 PRSVA L+ GQ++PFAKAD IDAVPTS EID+AL +LE +AKERG A+G+ASALPVS+ Sbjct: 312 PRSVAGQLAEGQAMPFAKADLTIDAVPTSVEIDKALARLEDLAKERGAAIGMASALPVSV 371 Query: 238 ERLGAWLKTLDSKGIMLVPLTTAMLKSKSG 267 ER+GAW K L+S+G+MLVPLTT MLKSKSG Sbjct: 372 ERIGAWAKGLESRGVMLVPLTTEMLKSKSG 401 >ref|NP_767075.1| hypothetical protein blr0435 [Bradyrhizobium japonicum USDA 110] dbj|BAC45700.1| blr0435 [Bradyrhizobium japonicum USDA 110] Length = 407 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 212/266 (79%), Positives = 237/266 (89%) Query: 1 MTGIDPRLLEKSRYGMIPVVADGLKPSTVYAAEADRAKAARMPVVAIVVAGLGVGAAKTT 60 M GIDP+LLEKSRYGMIPVVADG KP VYAA+ADRAKAA+MPVVAIV+ GLGVGAAKTT Sbjct: 141 MAGIDPKLLEKSRYGMIPVVADGSKPFNVYAADADRAKAAKMPVVAIVIGGLGVGAAKTT 200 Query: 61 DAIMKLPPAVTLAFTPYGSDPGKLAERARTQRHEILLQIPMEPFDYPDNDPGPQTLLTTL 120 DAIMKLP AVTLAFTPYGSDPGK+AERARTQRHEI LQIPMEP+D+PDNDPGPQTLLT+L Sbjct: 201 DAIMKLPAAVTLAFTPYGSDPGKIAERARTQRHEIFLQIPMEPYDFPDNDPGPQTLLTSL 260 Query: 121 SSEQNLDRFYWHLSRLQGYAGIANFMGGRFVAADPVMQPIVREAAKRGLSYFDDGSTPRS 180 S++QN+DR YWHLSR+QGYAGI NFMG RFVA D MQPI+REAAKRGL +FDDGS+PRS Sbjct: 261 SADQNMDRLYWHLSRMQGYAGITNFMGARFVATDAAMQPIIREAAKRGLGFFDDGSSPRS 320 Query: 181 VAQTLSAGQSLPFAKADFAIDAVPTSAEIDRALVKLETIAKERGTAVGVASALPVSIERL 240 +A +A Q++PF K D AID VPT AEIDRAL KLE+ A+ERGTA+G ASALPVSIER+ Sbjct: 321 IAPQAAASQAMPFGKGDIAIDVVPTPAEIDRALNKLESAARERGTAIGTASALPVSIERI 380 Query: 241 GAWLKTLDSKGIMLVPLTTAMLKSKS 266 GAW KTL +GI+LVPLTTAMLKSKS Sbjct: 381 GAWTKTLGDRGILLVPLTTAMLKSKS 406 >ref|YP_530061.1| hypothetical protein RPC_0167 [Rhodopseudomonas palustris BisB18] gb|ABD85742.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas palustris BisB18] Length = 412 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/267 (74%), Positives = 226/267 (84%), Gaps = 2/267 (0%) Query: 3 GIDPRLLEKSRYGMIPVVADGLKPSTVYA--AEADRAKAARMPVVAIVVAGLGVGAAKTT 60 GID +LLEKSRYGMIP+VADG+KP YA EADRAKAARMP +AIVV GLGVGAAKT Sbjct: 141 GIDQKLLEKSRYGMIPMVADGVKPFNAYATAGEADRAKAARMPSIAIVVGGLGVGAAKTN 200 Query: 61 DAIMKLPPAVTLAFTPYGSDPGKLAERARTQRHEILLQIPMEPFDYPDNDPGPQTLLTTL 120 DAIMKLP AVTLAFTPYGSDP KL ERAR QRHE+LLQIPMEPFDYPDNDPGPQTLLTTL Sbjct: 201 DAIMKLPAAVTLAFTPYGSDPAKLVERARAQRHEVLLQIPMEPFDYPDNDPGPQTLLTTL 260 Query: 121 SSEQNLDRFYWHLSRLQGYAGIANFMGGRFVAADPVMQPIVREAAKRGLSYFDDGSTPRS 180 SEQN+DR YWHLSR QGY GI NFMGGRFV +P +QPIVREAAKRGL Y DDG +PR Sbjct: 261 PSEQNIDRLYWHLSRFQGYIGITNFMGGRFVTTEPALQPIVREAAKRGLGYLDDGQSPRG 320 Query: 181 VAQTLSAGQSLPFAKADFAIDAVPTSAEIDRALVKLETIAKERGTAVGVASALPVSIERL 240 VA L+ Q+LPF KAD +ID VPT+ EIDRAL +LE++A++ G A+G+ASALP+SIER+ Sbjct: 321 VAALLATTQTLPFGKADLSIDVVPTALEIDRALYRLESLARDNGNAIGMASALPISIERI 380 Query: 241 GAWLKTLDSKGIMLVPLTTAMLKSKSG 267 W ++L+ +G++LVPLTTAMLKSKSG Sbjct: 381 ATWSRSLEGRGLLLVPLTTAMLKSKSG 407 >ref|YP_001236605.1| hypothetical protein BBta_0413 [Bradyrhizobium sp. BTAi1] gb|ABQ32699.1| hypothetical protein BBta_0413 [Bradyrhizobium sp. BTAi1] Length = 407 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 207/266 (77%), Positives = 234/266 (87%) Query: 1 MTGIDPRLLEKSRYGMIPVVADGLKPSTVYAAEADRAKAARMPVVAIVVAGLGVGAAKTT 60 M G+DPRLLEKSRYGMIPV+ADG+KP T YAAEADRAKAARMP VAIV+ GLGVGAAKT Sbjct: 141 MPGVDPRLLEKSRYGMIPVMADGVKPFTAYAAEADRAKAARMPAVAIVIGGLGVGAAKTV 200 Query: 61 DAIMKLPPAVTLAFTPYGSDPGKLAERARTQRHEILLQIPMEPFDYPDNDPGPQTLLTTL 120 +AIMKLPPAVTLAFTPYG+DP KLAERAR QRHEILLQ+PMEP+DYPDNDPGPQTLL TL Sbjct: 201 EAIMKLPPAVTLAFTPYGADPTKLAERARAQRHEILLQVPMEPYDYPDNDPGPQTLLATL 260 Query: 121 SSEQNLDRFYWHLSRLQGYAGIANFMGGRFVAADPVMQPIVREAAKRGLSYFDDGSTPRS 180 +QN+DR +WH+SRLQGY GI NFMG RFVA + MQPIV EAAKRGL+ FDDG+ PRS Sbjct: 261 GPDQNIDRLFWHMSRLQGYVGIGNFMGARFVATEAAMQPIVNEAAKRGLALFDDGAAPRS 320 Query: 181 VAQTLSAGQSLPFAKADFAIDAVPTSAEIDRALVKLETIAKERGTAVGVASALPVSIERL 240 VA +L+AG+++PFAK D AIDAVPT EID AL KLE++AKERG A+G ASALPVSI+R+ Sbjct: 321 VAASLAAGRAMPFAKGDVAIDAVPTPVEIDNALAKLESLAKERGIAIGTASALPVSIDRI 380 Query: 241 GAWLKTLDSKGIMLVPLTTAMLKSKS 266 GAW+K LD KGI+LVPLTTAMLKSKS Sbjct: 381 GAWIKGLDRKGILLVPLTTAMLKSKS 406 >ref|YP_001202617.1| hypothetical protein BRADO0424 [Bradyrhizobium sp. ORS 278] emb|CAL74371.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 405 Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust. Identities = 205/266 (77%), Positives = 231/266 (86%) Query: 1 MTGIDPRLLEKSRYGMIPVVADGLKPSTVYAAEADRAKAARMPVVAIVVAGLGVGAAKTT 60 M G+DPRLLEKSRYGMIPV+ DGLK T YAA+ADRAKAARMP VAIV+ GLG+GAAKT Sbjct: 139 MPGVDPRLLEKSRYGMIPVMTDGLKSFTAYAADADRAKAARMPAVAIVIGGLGIGAAKTV 198 Query: 61 DAIMKLPPAVTLAFTPYGSDPGKLAERARTQRHEILLQIPMEPFDYPDNDPGPQTLLTTL 120 DAIMKLPPAVTLAFTPYGSDP KLAERAR QRHEILLQ+PMEP+DYPDNDPGPQTLL TL Sbjct: 199 DAIMKLPPAVTLAFTPYGSDPSKLAERARAQRHEILLQVPMEPYDYPDNDPGPQTLLATL 258 Query: 121 SSEQNLDRFYWHLSRLQGYAGIANFMGGRFVAADPVMQPIVREAAKRGLSYFDDGSTPRS 180 +QN+DR +WH+SRLQGY GI NFMG RFVA + MQPIV EAAKRGL+ FDDG+ PRS Sbjct: 259 GPDQNIDRLFWHMSRLQGYVGIGNFMGARFVATETAMQPIVNEAAKRGLALFDDGAAPRS 318 Query: 181 VAQTLSAGQSLPFAKADFAIDAVPTSAEIDRALVKLETIAKERGTAVGVASALPVSIERL 240 VA +L+ G+++PFAK D AIDAVPT+ EID AL KLE++AKERG AVG ASALPVSI+R+ Sbjct: 319 VAASLATGRAVPFAKGDVAIDAVPTAVEIDNALAKLESLAKERGVAVGTASALPVSIDRI 378 Query: 241 GAWLKTLDSKGIMLVPLTTAMLKSKS 266 G W+K LD KGI+LVPLTTAMLKSKS Sbjct: 379 GTWIKGLDRKGILLVPLTTAMLKSKS 404