BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0133.0041.p         (120 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_578039.1| ABC transporter related [Nitrobacter hamburgens...   199   1e-49
ref|YP_002287901.1| branched-chain amino acid ABC transporter [O...   181   2e-44
ref|ZP_07025382.1| ABC transporter related protein [Afipia sp. 1...   177   6e-43
ref|ZP_08628810.1| branched-chain amino acid transport ATP-bindi...   160   6e-38
ref|YP_004416667.1| ABC transporter protein [Pusillimonas sp. T7...   144   6e-33

>ref|YP_578039.1| ABC transporter related [Nitrobacter hamburgensis X14]
 gb|ABE63579.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
           [Nitrobacter hamburgensis X14]
          Length = 232

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 96/107 (89%), Positives = 103/107 (96%)

Query: 1   MSLLEVNGLNSYYGDSHILFDVSMRVERNEVVALLGRNGAGKSTTLKSLMGVVTPRRGSV 60
           MSLLEVNGLNSYYGDSHILFDVSMRVERNEVVALLGRNGAGKSTTLKSLMGVVTPR GSV
Sbjct: 1   MSLLEVNGLNSYYGDSHILFDVSMRVERNEVVALLGRNGAGKSTTLKSLMGVVTPRAGSV 60

Query: 61  VFDGVEISGRKSHNIAQAGMQLVHEERRIFGSLSVEENLVIAGLTXA 107
           +FDG +++GRKSH IAQAGMQLVHEERRIFGSLSVEEN+V+AGLT +
Sbjct: 61  IFDGTDVAGRKSHKIAQAGMQLVHEERRIFGSLSVEENIVLAGLTAS 107


>ref|YP_002287901.1| branched-chain amino acid ABC transporter [Oligotropha
           carboxidovorans OM5]
 ref|YP_004633979.1| branched-chain amino acid ABC transporter ATP-binding protein
           [Oligotropha carboxidovorans OM5]
 gb|ACI92036.1| branched-chain amino acid ABC transporter [Oligotropha
           carboxidovorans OM5]
 gb|AEI04108.1| ABC transporter, high-affinity branched-chain amino acid transport
           ATP-binding protein LivF [Oligotropha carboxidovorans
           OM4]
 gb|AEI07738.1| ABC transporter, high-affinity branched-chain amino acid transport
           ATP-binding protein LivF [Oligotropha carboxidovorans
           OM5]
          Length = 232

 Score =  181 bits (460), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 87/105 (82%), Positives = 100/105 (95%)

Query: 1   MSLLEVNGLNSYYGDSHILFDVSMRVERNEVVALLGRNGAGKSTTLKSLMGVVTPRRGSV 60
           MSLLEV GLNSYYGDSHILFDVS+ V+R+EVVALLGRNGAGKSTTLKSLMGVVTPR GS+
Sbjct: 1   MSLLEVKGLNSYYGDSHILFDVSLNVQRHEVVALLGRNGAGKSTTLKSLMGVVTPRSGSI 60

Query: 61  VFDGVEISGRKSHNIAQAGMQLVHEERRIFGSLSVEENLVIAGLT 105
           +F+G EI+G+KSH IAQAGMQLVHE+RRIFGSL+VEEN+V+AG+T
Sbjct: 61  LFNGQEIAGKKSHLIAQAGMQLVHEDRRIFGSLNVEENIVLAGIT 105


>ref|ZP_07025382.1| ABC transporter related protein [Afipia sp. 1NLS2]
 gb|EFI52524.1| ABC transporter related protein [Afipia sp. 1NLS2]
          Length = 232

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 83/105 (79%), Positives = 99/105 (94%)

Query: 1   MSLLEVNGLNSYYGDSHILFDVSMRVERNEVVALLGRNGAGKSTTLKSLMGVVTPRRGSV 60
           MSLLEV GLNS+YGDSHILFDVS+ V RNEVVALLGRNGAGKSTTLKSLMGVVTPR G++
Sbjct: 1   MSLLEVKGLNSFYGDSHILFDVSLNVNRNEVVALLGRNGAGKSTTLKSLMGVVTPRSGNI 60

Query: 61  VFDGVEISGRKSHNIAQAGMQLVHEERRIFGSLSVEENLVIAGLT 105
           +F+G +++G+KSH IAQAGMQLVHE+RRIFGSL+VEEN+++AG+T
Sbjct: 61  MFNGHDVAGKKSHVIAQAGMQLVHEDRRIFGSLNVEENIILAGIT 105


>ref|ZP_08628810.1| branched-chain amino acid transport ATP-binding protein
           [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08169.1| branched-chain amino acid transport ATP-binding protein
           [Bradyrhizobiaceae bacterium SG-6C]
          Length = 224

 Score =  160 bits (405), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 75/97 (77%), Positives = 87/97 (89%)

Query: 9   LNSYYGDSHILFDVSMRVERNEVVALLGRNGAGKSTTLKSLMGVVTPRRGSVVFDGVEIS 68
           +NSYY DSHILFDV +RV+RNEVVALLGRNGAGKSTTLKSLMG++TPR G VV DG +++
Sbjct: 1   MNSYYADSHILFDVGLRVDRNEVVALLGRNGAGKSTTLKSLMGILTPRSGKVVLDGTDVA 60

Query: 69  GRKSHNIAQAGMQLVHEERRIFGSLSVEENLVIAGLT 105
           G KSH IA AGMQLV E+RRIFGSL+VEEN+V+AGLT
Sbjct: 61  GSKSHAIANAGMQLVPEDRRIFGSLNVEENIVLAGLT 97


>ref|YP_004416667.1| ABC transporter protein [Pusillimonas sp. T7-7]
 gb|AEC20043.1| ABC transporter protein [Pusillimonas sp. T7-7]
          Length = 234

 Score =  144 bits (362), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 91/112 (81%), Gaps = 1/112 (0%)

Query: 1   MSLLEVNGLNSYYGDSHILFDVSMRVERNEVVALLGRNGAGKSTTLKSLMGVVTPRRGSV 60
           MSLLEVN +NSYYGDSHILFDVSMRVE NEVVALLGRNGAGKSTTLK+LMG+V  + G +
Sbjct: 1   MSLLEVNKINSYYGDSHILFDVSMRVEENEVVALLGRNGAGKSTTLKTLMGMVPAKSGII 60

Query: 61  VFDGVEISGRKSHNIAQAGMQLVHEERRIFGSLSVEENLVIAGLTXADPARA 112
             +G E+     + +A+ G+QLV EERR+FGS++V+ENL +A ++ A+ AR+
Sbjct: 61  RHNGTEVQHLPPYQLARRGIQLVPEERRVFGSITVQENLQLAAMS-AEQARS 111