BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0133.0038.p (451 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07025385.1| twin-arginine translocation pathway signal [A... 759 0.0 ref|YP_578042.1| twin-arginine translocation pathway signal [Nit... 742 0.0 ref|YP_002287898.1| twin-arginine translocation pathway signal [... 737 0.0 ref|ZP_08628807.1| leucine-, isoleucine-, valine-, threonine-, a... 660 0.0 ref|YP_004416670.1| ABC transporter, substrate-binding protein [... 469 e-130 >ref|ZP_07025385.1| twin-arginine translocation pathway signal [Afipia sp. 1NLS2] gb|EFI52527.1| twin-arginine translocation pathway signal [Afipia sp. 1NLS2] Length = 450 Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/439 (80%), Positives = 395/439 (89%), Gaps = 1/439 (0%) Query: 14 VSRRTLLQAGAGLIGGTVLPASIASRAFAEDHPAIGTFPAGTSGSSAFIGISVPRTGTYA 73 +SRR LLQ AGLIGG L ++ AFA DHPAIGT+PAG+SGS+ G +VPRTGTYA Sbjct: 12 LSRRALLQGSAGLIGGAALSGGLSMPAFAADHPAIGTYPAGSSGSTITFGAAVPRTGTYA 71 Query: 74 VQGEDELKGYQLAIEHINSGHELIKKISPKTSKGVLGKELKFGVADSAAKPNEAVQAQQR 133 VQGEDELKG++LA+EHIN GH+L+KKISPKTSKG+LGKE+K VADS AKPN AVQA+QR Sbjct: 72 VQGEDELKGWELAVEHINQGHDLVKKISPKTSKGILGKEVKLVVADSGAKPNIAVQAEQR 131 Query: 134 FISENKAVMITGGTSSAVAVALNKLAQREKVIFVCGISGSNDTTGKDCVRYGFRQNFFGQ 193 FI+ENK V++TG TSSAVAVALNKLAQREKV+++ GISGSNDTTGKDCVRYGFRQNFFGQ Sbjct: 132 FITENKVVLMTGSTSSAVAVALNKLAQREKVMYLAGISGSNDTTGKDCVRYGFRQNFFGQ 191 Query: 194 TAAAAIAPVLIKQFGKNKKAAYLTPDYTYGHTVTKSMQDYLAQAGWTTVTNQVSPLGAPD 253 TAAAAI P L+K FGKNKKAAY+TPDYTYGHTVTKSMQDYLA AGWTTVTNQVSPLGAPD Sbjct: 192 TAAAAIGPQLVKVFGKNKKAAYMTPDYTYGHTVTKSMQDYLATAGWTTVTNQVSPLGAPD 251 Query: 254 YSSYLLNVANSGADVLINVNWGHDAVLSTQQAKQFGVLDKMKLVVPYQVPFIARETGG-L 312 YSSYLLNVANSGADVLINVNWGHDAVLSTQQAKQFG+ DKMKL VPYQ+PF+A E GG L Sbjct: 252 YSSYLLNVANSGADVLINVNWGHDAVLSTQQAKQFGIFDKMKLAVPYQIPFLAPEVGGNL 311 Query: 313 MQGVYAATDYWWTIEDKYPLAKMFNEAFEKKYGYKPEWGAENAYVSFAHWARMVEEAGSF 372 + GVYAATDYWWTIEDKYPLAKMFNEAF KKYGY+PEWGAENAY+SF HWARM EEA SF Sbjct: 312 LAGVYAATDYWWTIEDKYPLAKMFNEAFSKKYGYQPEWGAENAYISFVHWARMAEEAKSF 371 Query: 373 YPPDVIKAYEKGETLPSLVGDVHYRPEDHQCVRPVVIVRGKMEKEMKNKEDYYEVIEIVP 432 YPPD+IK YEK E +PSLVG+V+YR EDHQC+RPV+IVRGK +MKNKEDY++V+EIVP Sbjct: 372 YPPDIIKTYEKEEKIPSLVGEVYYRKEDHQCIRPVIIVRGKKSADMKNKEDYWDVVEIVP 431 Query: 433 GDGLMQKPDAFGCHLGDYT 451 G+GLMQKPDAFGC+LGDYT Sbjct: 432 GEGLMQKPDAFGCNLGDYT 450 >ref|YP_578042.1| twin-arginine translocation pathway signal [Nitrobacter hamburgensis X14] gb|ABE63582.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Nitrobacter hamburgensis X14] Length = 450 Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/438 (79%), Positives = 399/438 (91%) Query: 14 VSRRTLLQAGAGLIGGTVLPASIASRAFAEDHPAIGTFPAGTSGSSAFIGISVPRTGTYA 73 VSRR+LLQ AGLIGG +LP + AFA+D PAIGT+PAG+SGSS IG++VPRTGTYA Sbjct: 13 VSRRSLLQGSAGLIGGLMLPNGLIMPAFADDKPAIGTWPAGSSGSSVSIGVAVPRTGTYA 72 Query: 74 VQGEDELKGYQLAIEHINSGHELIKKISPKTSKGVLGKELKFGVADSAAKPNEAVQAQQR 133 VQGEDELKG++LA EH+NSGHEL+KK+SPKT KGVLGKE+K VADS AKPN+AVQA+QR Sbjct: 73 VQGEDELKGWELAAEHLNSGHELVKKLSPKTKKGVLGKEVKLVVADSGAKPNQAVQAEQR 132 Query: 134 FISENKAVMITGGTSSAVAVALNKLAQREKVIFVCGISGSNDTTGKDCVRYGFRQNFFGQ 193 FI+ENK V++TG TSSAVAVALNKLAQRE V++V GISGSNDTTGKDCVRYGFRQ F+G+ Sbjct: 133 FITENKVVLMTGSTSSAVAVALNKLAQREHVLYVAGISGSNDTTGKDCVRYGFRQCFYGE 192 Query: 194 TAAAAIAPVLIKQFGKNKKAAYLTPDYTYGHTVTKSMQDYLAQAGWTTVTNQVSPLGAPD 253 AA AI PV++K +GKNKKAAYLTPDYTYGHT T S+++YL GWTTVTNQVSPLGAPD Sbjct: 193 MAANAIGPVIVKAYGKNKKAAYLTPDYTYGHTTTASVENYLKSQGWTTVTNQVSPLGAPD 252 Query: 254 YSSYLLNVANSGADVLINVNWGHDAVLSTQQAKQFGVLDKMKLVVPYQVPFIARETGGLM 313 YSSYLLNV NSGADVLINVNWGHD VLSTQQAKQFGVLDKMKLVVPYQVPF+ARETGGLM Sbjct: 253 YSSYLLNVVNSGADVLINVNWGHDCVLSTQQAKQFGVLDKMKLVVPYQVPFLARETGGLM 312 Query: 314 QGVYAATDYWWTIEDKYPLAKMFNEAFEKKYGYKPEWGAENAYVSFAHWARMVEEAGSFY 373 + VYAATDYWWT+EDKYPLAKMFNE+FEKKYGYKPEWGAENAY++ HWARMVEEAGSFY Sbjct: 313 EDVYAATDYWWTLEDKYPLAKMFNESFEKKYGYKPEWGAENAYIAVVHWARMVEEAGSFY 372 Query: 374 PPDVIKAYEKGETLPSLVGDVHYRPEDHQCVRPVVIVRGKMEKEMKNKEDYYEVIEIVPG 433 PPDVIK +EKGET+PSLVGDVHYRPEDHQCVRPV+IV+GK +K+MKNK+D+Y+++EIVPG Sbjct: 373 PPDVIKVWEKGETIPSLVGDVHYRPEDHQCVRPVIIVKGKAKKDMKNKDDWYDIVEIVPG 432 Query: 434 DGLMQKPDAFGCHLGDYT 451 + ++QKPDAFGC LGDYT Sbjct: 433 ESVIQKPDAFGCKLGDYT 450 >ref|YP_002287898.1| twin-arginine translocation pathway signal [Oligotropha carboxidovorans OM5] ref|YP_004633982.1| high-affinity branched-chain amino acid ABC transporter substrate-binding-protein [Oligotropha carboxidovorans OM5] gb|ACI92033.1| twin-arginine translocation pathway signal [Oligotropha carboxidovorans OM5] gb|AEI04111.1| ABC transporter, putative high-affinity branched-chain amino acid transport substrate-binding-protein [Oligotropha carboxidovorans OM4] gb|AEI07741.1| ABC transporter, putative high-affinity branched-chain amino acid transport substrate-binding-protein [Oligotropha carboxidovorans OM5] Length = 449 Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/440 (77%), Positives = 391/440 (88%), Gaps = 2/440 (0%) Query: 13 NVSRRTLLQAGAGLIGGTVLPASIASRAFAEDHPAIGTFPAGTSGSSAFIGISVPRTGTY 72 ++SRR +L+ AGL GG L + FA D+PAIGT+PAG+SGS+ G++VPRTGTY Sbjct: 11 DISRRAMLRGSAGLAGGLALTGGLTMPVFA-DNPAIGTYPAGSSGSTVTFGVAVPRTGTY 69 Query: 73 AVQGEDELKGYQLAIEHINSGHELIKKISPKTSKGVLGKELKFGVADSAAKPNEAVQAQQ 132 AVQGEDELKG++LA+EH+N+GHEL+KK+SPKTSKGVLGKE+K VADS AKPN AVQAQQ Sbjct: 70 AVQGEDELKGWELAVEHLNTGHELVKKLSPKTSKGVLGKEIKLVVADSGAKPNIAVQAQQ 129 Query: 133 RFISENKAVMITGGTSSAVAVALNKLAQREKVIFVCGISGSNDTTGKDCVRYGFRQNFFG 192 RFI+ENK V++TG TSSAVAVALNKLAQREKV++V GISGSNDTTGKDCVRYGFRQ F+G Sbjct: 130 RFITENKVVLMTGSTSSAVAVALNKLAQREKVMYVAGISGSNDTTGKDCVRYGFRQCFYG 189 Query: 193 QTAAAAIAPVLIKQFGKNKKAAYLTPDYTYGHTVTKSMQDYLAQAGWTTVTNQVSPLGAP 252 + AA AI P +IK FGKNKKAAYLTPDYTYGHT T S+++YL GWTTVTNQVSPLGAP Sbjct: 190 EMAANAIGPTIIKTFGKNKKAAYLTPDYTYGHTTTASVENYLKGQGWTTVTNQVSPLGAP 249 Query: 253 DYSSYLLNVANSGADVLINVNWGHDAVLSTQQAKQFGVLDKMKLVVPYQVPFIARET-GG 311 DYSSYLLNVANSGADVLINVNWGHD VLSTQQAKQFG+ DKMKLVVPYQVPF+ARE GG Sbjct: 250 DYSSYLLNVANSGADVLINVNWGHDCVLSTQQAKQFGIFDKMKLVVPYQVPFLAREVGGG 309 Query: 312 LMQGVYAATDYWWTIEDKYPLAKMFNEAFEKKYGYKPEWGAENAYVSFAHWARMVEEAGS 371 L+ GVYAATDYWWT+E+++PLAKMFN++FEKKYGYKPEWGAENAY+ F HWARM EEA S Sbjct: 310 LLAGVYAATDYWWTLEEQFPLAKMFNDSFEKKYGYKPEWGAENAYMGFVHWARMAEEAKS 369 Query: 372 FYPPDVIKAYEKGETLPSLVGDVHYRPEDHQCVRPVVIVRGKMEKEMKNKEDYYEVIEIV 431 FYPPD+IKAYEKGET+PSLVGDVHYRPEDHQCVRPV+IVRGK +MKNKEDYYE++EIV Sbjct: 370 FYPPDIIKAYEKGETIPSLVGDVHYRPEDHQCVRPVIIVRGKKPSDMKNKEDYYEIVEIV 429 Query: 432 PGDGLMQKPDAFGCHLGDYT 451 PGD ++QKPDAFGC LGDYT Sbjct: 430 PGDKVIQKPDAFGCKLGDYT 449 >ref|ZP_08628807.1| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08166.1| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein [Bradyrhizobiaceae bacterium SG-6C] Length = 453 Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/453 (67%), Positives = 373/453 (82%), Gaps = 2/453 (0%) Query: 1 MSTRDFRPGSALNVSRRTLLQAGAGLIGGTVLPASIASRAFAEDHPAIGTFPAGTSGSSA 60 M+ + F +L+VSRR+LLQ+GAGLIGG +L + AFA IGT+PAG++G + Sbjct: 1 MTKKLFDKEMSLSVSRRSLLQSGAGLIGGAMLSTGMTIPAFAVGESPIGTWPAGSAGDTV 60 Query: 61 FIGISVPRTGTYAVQGEDELKGYQLAIEHINSGHELIKKISPKTSKGVLGKELKFGVADS 120 FIG ++PRTG YA QGEDELKG +LA+EHIN GH+LIKKI+PK +KGVLGK++K ADS Sbjct: 61 FIGATIPRTGAYAAQGEDELKGMELAVEHINEGHDLIKKIAPKVTKGVLGKKVKLVSADS 120 Query: 121 AAKPNEAVQAQQRFISENKAVMITGGTSSAVAVALNKLAQREKVIFVCGISGSNDTTGKD 180 AAKPN+A+QAQQ FI++NK V +TG TSSAVAVALNK A+REK++++ ISGSNDTTGKD Sbjct: 121 AAKPNQALQAQQTFINDNKIVAMTGSTSSAVAVALNKFAEREKILYLVAISGSNDTTGKD 180 Query: 181 CVRYGFRQNFFGQTAAAAIAPVLIKQFGKNKKAAYLTPDYTYGHTVTKSMQDYLAQ-AGW 239 C RY RQ F+G TAA AI PVL+K FGK KKAA++TPDYTYGHTVTK++ +YL + GW Sbjct: 181 CSRYSMRQCFYGDTAANAIGPVLLKNFGKGKKAAFMTPDYTYGHTVTKAVNEYLTKNGGW 240 Query: 240 TTVTNQVSPLGAPDYSSYLLNVANSGADVLINVNWGHDAVLSTQQAKQFGVLDKMKLVVP 299 T VTNQVSPLG D+S YL N+ANSGA+ ++NVNWG DAVLS QQAKQFG+ KMK+V+P Sbjct: 241 TMVTNQVSPLGTQDFSQYLTNIANSGAEFIVNVNWGRDAVLSVQQAKQFGLTPKMKMVIP 300 Query: 300 YQVPFIARETGG-LMQGVYAATDYWWTIEDKYPLAKMFNEAFEKKYGYKPEWGAENAYVS 358 YQ+PF+A+E G L +GV+AATD+WWT+EDKYPLAKMF FEKKYGYKPEWGAENAY+ Sbjct: 301 YQIPFLAKEVGAELTEGVFAATDFWWTLEDKYPLAKMFVSTFEKKYGYKPEWGAENAYMQ 360 Query: 359 FAHWARMVEEAGSFYPPDVIKAYEKGETLPSLVGDVHYRPEDHQCVRPVVIVRGKMEKEM 418 FA WARMV +AG+FYPP VIK YEKGET PS+VGDVH+R DHQ VRPV+IVRGK K+M Sbjct: 361 FAMWARMVSQAGTFYPPSVIKEYEKGETFPSMVGDVHFRAADHQLVRPVIIVRGKAPKDM 420 Query: 419 KNKEDYYEVIEIVPGDGLMQKPDAFGCHLGDYT 451 KNKED++EV+E+VPG+ LMQKP+A GC LGDYT Sbjct: 421 KNKEDFWEVMEVVPGEPLMQKPEASGCKLGDYT 453 >ref|YP_004416670.1| ABC transporter, substrate-binding protein [Pusillimonas sp. T7-7] gb|AEC20046.1| ABC transporter, substrate-binding protein [Pusillimonas sp. T7-7] Length = 448 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 238/438 (54%), Positives = 304/438 (69%), Gaps = 3/438 (0%) Query: 14 VSRRTLLQAGAGLIGGTVLPASIASRAFAEDHPAIGTFPAGTSGSSAFIGISVPRTGTYA 73 V+RR++L+ GA +A A ++ IG FPAG G S FIG+++ TG Y+ Sbjct: 12 VNRRSMLKMGAAGSALLAGAPKMALAA--DEKKPIGNFPAGVEGDSVFIGLTLDITGPYS 69 Query: 74 VQGEDELKGYQLAIEHINSGHELIKKISPKTSKGVLGKELKFGVADSAAKPNEAVQAQQR 133 QG D+ KGY+LAIE +N+G E IKKISP T KGVLGK +KFGVAD+ KPN AVQA R Sbjct: 70 AQGADQQKGYELAIEQLNAGAEEIKKISPLTKKGVLGKTVKFGVADAETKPNTAVQAASR 129 Query: 134 FISENKAVMITGGTSSAVAVALNKLAQREKVIFVCGISGSNDTTGKDCVRYGFRQNFFGQ 193 FI +NKA++I+G TSSAVA+AL K+ RE+ I++ ISGSN+TTG DC RYGFR +F Sbjct: 130 FIHDNKAMVISGSTSSAVAIALQKVCDRERTIYLPAISGSNETTGVDCQRYGFRLCYFAY 189 Query: 194 TAAAAIAPVLIKQFGKNKKAAYLTPDYTYGHTVTKSMQDYLAQAGWTTVTNQVSPLGAPD 253 TA AIAPVL K GK++KA YL PDYTYGHT SM ++ + GWTTV QV PLGA D Sbjct: 190 TACKAIAPVLAKSLGKDRKAIYLVPDYTYGHTTYDSMVEFTEKEGWTTVGEQVHPLGAKD 249 Query: 254 YSSYLLNVANSGADVLINVNWGHDAVLSTQQAKQFGVLDKMKLVVPYQVPFIARETG-GL 312 YSS+L+N+ANSGAD L+ + +G DA S +QAKQFG+L+KM +VVPY F+ +E G + Sbjct: 250 YSSFLINIANSGADTLVVIAYGADAANSIKQAKQFGLLEKMNIVVPYMSAFLEKEIGPEI 309 Query: 313 MQGVYAATDYWWTIEDKYPLAKMFNEAFEKKYGYKPEWGAENAYVSFAHWARMVEEAGSF 372 M GVY AT +WWT++D+YP+AK F AFEKKY KP A AY++ A WA VE AG+F Sbjct: 310 MGGVYGATGFWWTLQDQYPIAKDFVTAFEKKYKAKPRDSAYIAYLTTALWADAVERAGTF 369 Query: 373 YPPDVIKAYEKGETLPSLVGDVHYRPEDHQCVRPVVIVRGKMEKEMKNKEDYYEVIEIVP 432 YPPDVIKAYE GE VGDV +R EDHQ + IV+GK +M+N +DY+E++E+V Sbjct: 370 YPPDVIKAYEAGEVRQGPVGDVSFRAEDHQGIINFPIVKGKKPADMQNPDDYFEIVEVVN 429 Query: 433 GDGLMQKPDAFGCHLGDY 450 G + + GC LG Y Sbjct: 430 GKEALPELGVLGCKLGPY 447