BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0133.0037.p         (146 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08628806.1| hypothetical protein CSIRO_1891 [Bradyrhizobi...   132   2e-29
ref|XP_002891715.1| phototropic-responsive NPH3 family protein [...    37   0.66 
ref|NP_175686.1| phototropic-responsive NPH3-like protein [Arabi...    34   8.5  

>ref|ZP_08628806.1| hypothetical protein CSIRO_1891 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08165.1| hypothetical protein CSIRO_1891 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 182

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/134 (48%), Positives = 93/134 (69%)

Query: 8   EQSGSLSIRAVNVLKELAVELLDEVPPKMGWTPPDDLLRLLTARHLATARNCGRQTMREI 67
           +Q   LS+RA NVLK L+ +L  E PP+  WTP D L+R LT RHLATARNCG QT+ EI
Sbjct: 49  DQDIQLSVRAENVLKILSTDLTGENPPRGKWTPSDLLIRRLTYRHLATARNCGPQTLAEI 108

Query: 68  IAWAEARGITIPSPHHTGKSLSEVWGDLVARASAGHLTKSEITEALEKSIRRRSPRIPVA 127
           + WA+ +G TI      GKSL+ +W D++A+ S+  ++K+E+  ALE S RRR+ RIP+ 
Sbjct: 109 LRWAQLKGRTIKPSFRAGKSLTIMWDDIIAKMSSEGVSKAEVAAALEVSTRRRNTRIPIE 168

Query: 128 FQIVLLKILSSTYD 141
           FQ  LL++ +++ +
Sbjct: 169 FQKALLELFNASNE 182


>ref|XP_002891715.1| phototropic-responsive NPH3 family protein [Arabidopsis lyrata
           subsp. lyrata]
 gb|EFH67974.1| phototropic-responsive NPH3 family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 456

 Score = 37.4 bits (85), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 7/91 (7%)

Query: 13  LSIRAVNVLKELAVE-LLDEVPPKMGWTPPDDLLRLLTARHLATARNCGRQTMREIIAW- 70
            S+ A  + K   VE LL  +PP+    P D LLRLL   ++  A +  ++ + E ++W 
Sbjct: 93  FSVTAFVMKKRFFVETLLGIIPPEKDSVPCDFLLRLLRTANMVGADSNYKKELEERVSWQ 152

Query: 71  ---AEARGITIPSPHHTGKSLSEVWGDLVAR 98
              A  + + IPS  H   +L +V  +LV R
Sbjct: 153 LDQASLKELMIPSFSHLCGTLLDV--ELVTR 181


>ref|NP_175686.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana]
 gb|AAG52282.1|AC019018_19 putative non-phototropic hypocotyl; 25081-26618 [Arabidopsis
           thaliana]
 gb|AAO00852.1| putative non-phototropic hypocotyl [Arabidopsis thaliana]
 gb|AAP49519.1| At1g52770 [Arabidopsis thaliana]
 gb|AEE32850.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana]
          Length = 454

 Score = 33.9 bits (76), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 12  SLSIRAVNVLKELAVE-LLDEVPPKMGWTPPDDLLRLLTARHLATARNCGRQTMREIIAW 70
           S S+ A  + K   VE L+  +PP+    P D LLRLL   ++  A    +  +   I+W
Sbjct: 92  SFSVTAFVMKKRSFVETLIGIIPPERDSVPCDFLLRLLRTANMVGADANYKAELEARISW 151

Query: 71  ----AEARGITIPSPHHTGKSLSEV 91
               A  + + IPS  HT  +L +V
Sbjct: 152 QLDQASLKELMIPSFSHTCGTLLDV 176