BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0133.0019.p         (458 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q89BJ8.2|LEPA_BRAJA RecName: Full=Elongation factor 4; Short=...   690   0.0  
ref|NP_774790.1| GTP-binding protein LepA [Bradyrhizobium japoni...   689   0.0  
ref|YP_001243143.1| GTP-binding protein LepA [Bradyrhizobium sp....   684   0.0  
ref|YP_001202898.1| GTP-binding protein LepA [Bradyrhizobium sp....   683   0.0  
ref|YP_316962.1| GTP-binding protein LepA [Nitrobacter winograds...   681   0.0  

>sp|Q89BJ8.2|LEPA_BRAJA RecName: Full=Elongation factor 4; Short=EF-4; AltName:
           Full=Ribosomal back-translocase LepA
          Length = 603

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/347 (96%), Positives = 344/347 (99%)

Query: 1   MTTAPISNIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGIT 60
           MTT PISNIRNFSIVAHIDHGKSTLADRLIQMTGGL+DREMAGKEQVLDSMDIERERGIT
Sbjct: 1   MTTVPISNIRNFSIVAHIDHGKSTLADRLIQMTGGLTDREMAGKEQVLDSMDIERERGIT 60

Query: 61  IKAQTVRLNYRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL 120
           IKAQTVRL YRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL
Sbjct: 61  IKAQTVRLAYRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL 120

Query: 121 ANVYQALDNNHEIVPVLNKVDLPAAEPEKVKQQIEDVIGIDASDAVMISAKTGVGVPDVL 180
           ANVYQALDNNHEIVPVLNKVDLPAAEPEKVKQQIEDVIGIDASDAVMISAKTG+GVPDVL
Sbjct: 121 ANVYQALDNNHEIVPVLNKVDLPAAEPEKVKQQIEDVIGIDASDAVMISAKTGLGVPDVL 180

Query: 181 EAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVVDGVMKKGSRIRMMGTGAAYD 240
           EAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVVDGVMKKGSR+RMMGTGAAYD
Sbjct: 181 EAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVVDGVMKKGSRVRMMGTGAAYD 240

Query: 241 IERVGFFTPKMEQVEELGPGEIGFITAAIKEVADTRVGDTITDDRKPISEMLPGFKPAIP 300
           +ERVGFFTPKM QV+ELGPGEIGFITAAIKEVADTRVGDTITDDRKP++EMLPGFKPAIP
Sbjct: 241 VERVGFFTPKMTQVDELGPGEIGFITAAIKEVADTRVGDTITDDRKPVTEMLPGFKPAIP 300

Query: 301 VVFCGLFPVDANDFETLRAAMGKLRLNDASFSYEMETSAALGFGFRC 347
           VVFCGLFPVDA+DFETLRAAMGKLRLNDASFS+EMETSAALGFGFRC
Sbjct: 301 VVFCGLFPVDADDFETLRAAMGKLRLNDASFSFEMETSAALGFGFRC 347


>ref|NP_774790.1| GTP-binding protein LepA [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53415.1| GTP-binding elongation factor [Bradyrhizobium japonicum USDA 110]
          Length = 616

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/347 (96%), Positives = 344/347 (99%)

Query: 1   MTTAPISNIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGIT 60
           MTT PISNIRNFSIVAHIDHGKSTLADRLIQMTGGL+DREMAGKEQVLDSMDIERERGIT
Sbjct: 14  MTTVPISNIRNFSIVAHIDHGKSTLADRLIQMTGGLTDREMAGKEQVLDSMDIERERGIT 73

Query: 61  IKAQTVRLNYRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL 120
           IKAQTVRL YRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL
Sbjct: 74  IKAQTVRLAYRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL 133

Query: 121 ANVYQALDNNHEIVPVLNKVDLPAAEPEKVKQQIEDVIGIDASDAVMISAKTGVGVPDVL 180
           ANVYQALDNNHEIVPVLNKVDLPAAEPEKVKQQIEDVIGIDASDAVMISAKTG+GVPDVL
Sbjct: 134 ANVYQALDNNHEIVPVLNKVDLPAAEPEKVKQQIEDVIGIDASDAVMISAKTGLGVPDVL 193

Query: 181 EAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVVDGVMKKGSRIRMMGTGAAYD 240
           EAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVVDGVMKKGSR+RMMGTGAAYD
Sbjct: 194 EAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVVDGVMKKGSRVRMMGTGAAYD 253

Query: 241 IERVGFFTPKMEQVEELGPGEIGFITAAIKEVADTRVGDTITDDRKPISEMLPGFKPAIP 300
           +ERVGFFTPKM QV+ELGPGEIGFITAAIKEVADTRVGDTITDDRKP++EMLPGFKPAIP
Sbjct: 254 VERVGFFTPKMTQVDELGPGEIGFITAAIKEVADTRVGDTITDDRKPVTEMLPGFKPAIP 313

Query: 301 VVFCGLFPVDANDFETLRAAMGKLRLNDASFSYEMETSAALGFGFRC 347
           VVFCGLFPVDA+DFETLRAAMGKLRLNDASFS+EMETSAALGFGFRC
Sbjct: 314 VVFCGLFPVDADDFETLRAAMGKLRLNDASFSFEMETSAALGFGFRC 360


>ref|YP_001243143.1| GTP-binding protein LepA [Bradyrhizobium sp. BTAi1]
 gb|ABQ39237.1| GTP-binding protein LepA [Bradyrhizobium sp. BTAi1]
          Length = 617

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/347 (94%), Positives = 343/347 (98%)

Query: 1   MTTAPISNIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGIT 60
           MTT PI NIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGIT
Sbjct: 15  MTTVPIPNIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGIT 74

Query: 61  IKAQTVRLNYRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL 120
           IKAQTVRL YRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL
Sbjct: 75  IKAQTVRLQYRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL 134

Query: 121 ANVYQALDNNHEIVPVLNKVDLPAAEPEKVKQQIEDVIGIDASDAVMISAKTGVGVPDVL 180
           ANVYQALDNNHEIVPVLNK+DLPAAEPEK+KQQIEDVIGIDASDAVMISAKTG+G+PDVL
Sbjct: 135 ANVYQALDNNHEIVPVLNKIDLPAAEPEKIKQQIEDVIGIDASDAVMISAKTGLGIPDVL 194

Query: 181 EAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVVDGVMKKGSRIRMMGTGAAYD 240
           EAIVTRLPPPKGDR+ATLKALLVDSWYDVYLGVVVL+R+VDGVMKKG RIRMMGTGAAYD
Sbjct: 195 EAIVTRLPPPKGDREATLKALLVDSWYDVYLGVVVLVRIVDGVMKKGQRIRMMGTGAAYD 254

Query: 241 IERVGFFTPKMEQVEELGPGEIGFITAAIKEVADTRVGDTITDDRKPISEMLPGFKPAIP 300
           +ERVGFFTPKM+QV+ELGPGE+GFITAAIKEVADTRVGDTITDDRKP+SEMLPGFKPAIP
Sbjct: 255 VERVGFFTPKMQQVDELGPGEVGFITAAIKEVADTRVGDTITDDRKPVSEMLPGFKPAIP 314

Query: 301 VVFCGLFPVDANDFETLRAAMGKLRLNDASFSYEMETSAALGFGFRC 347
           VVFCGLFPVDA+DFETLRAAMGKLRLNDASFS+EMETSAALGFGFRC
Sbjct: 315 VVFCGLFPVDADDFETLRAAMGKLRLNDASFSFEMETSAALGFGFRC 361


>ref|YP_001202898.1| GTP-binding protein LepA [Bradyrhizobium sp. ORS 278]
 emb|CAL74658.1| GTP-binding elongation factor [Bradyrhizobium sp. ORS 278]
          Length = 617

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/347 (94%), Positives = 343/347 (98%)

Query: 1   MTTAPISNIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGIT 60
           MTT PI NIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGIT
Sbjct: 15  MTTVPIPNIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGIT 74

Query: 61  IKAQTVRLNYRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL 120
           IKAQTVRL YRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL
Sbjct: 75  IKAQTVRLQYRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL 134

Query: 121 ANVYQALDNNHEIVPVLNKVDLPAAEPEKVKQQIEDVIGIDASDAVMISAKTGVGVPDVL 180
           ANVYQALDNNHEIVPVLNK+DLPAAEP+K+KQQIEDVIGIDASDAVMISAKTG+G+PDVL
Sbjct: 135 ANVYQALDNNHEIVPVLNKIDLPAAEPDKIKQQIEDVIGIDASDAVMISAKTGLGIPDVL 194

Query: 181 EAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVVDGVMKKGSRIRMMGTGAAYD 240
           EAIVTRLPPPKGDR+ATLKALLVDSWYDVYLGVVVL+R+VDGVMKKG RIRMMGTGAAYD
Sbjct: 195 EAIVTRLPPPKGDREATLKALLVDSWYDVYLGVVVLVRIVDGVMKKGQRIRMMGTGAAYD 254

Query: 241 IERVGFFTPKMEQVEELGPGEIGFITAAIKEVADTRVGDTITDDRKPISEMLPGFKPAIP 300
           +ERVGFFTPKM+QV+ELGPGE+GFITAAIKEVADTRVGDTITDDRKP+SEMLPGFKPAIP
Sbjct: 255 VERVGFFTPKMQQVDELGPGEVGFITAAIKEVADTRVGDTITDDRKPVSEMLPGFKPAIP 314

Query: 301 VVFCGLFPVDANDFETLRAAMGKLRLNDASFSYEMETSAALGFGFRC 347
           VVFCGLFPVDA+DFETLRAAMGKLRLNDASFS+EMETSAALGFGFRC
Sbjct: 315 VVFCGLFPVDADDFETLRAAMGKLRLNDASFSFEMETSAALGFGFRC 361


>ref|YP_316962.1| GTP-binding protein LepA [Nitrobacter winogradskyi Nb-255]
 sp|Q3SVT1.1|LEPA_NITWN RecName: Full=Elongation factor 4; Short=EF-4; AltName:
           Full=Ribosomal back-translocase LepA
 gb|ABA03610.1| GTP-binding protein LepA [Nitrobacter winogradskyi Nb-255]
          Length = 603

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/347 (94%), Positives = 344/347 (99%)

Query: 1   MTTAPISNIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGIT 60
           MTT+PI+NIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGIT
Sbjct: 1   MTTSPIANIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGIT 60

Query: 61  IKAQTVRLNYRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL 120
           IKAQTVRL YRAKDGKDY+FNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL
Sbjct: 61  IKAQTVRLKYRAKDGKDYVFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTL 120

Query: 121 ANVYQALDNNHEIVPVLNKVDLPAAEPEKVKQQIEDVIGIDASDAVMISAKTGVGVPDVL 180
           ANVYQALDNNHEIVPVLNKVDLPAAEP+KVKQQIEDVIGIDASDAVMISAKTG+GVPDVL
Sbjct: 121 ANVYQALDNNHEIVPVLNKVDLPAAEPDKVKQQIEDVIGIDASDAVMISAKTGLGVPDVL 180

Query: 181 EAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVVDGVMKKGSRIRMMGTGAAYD 240
           EAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRV+DG ++KGSRIRM+GT AAYD
Sbjct: 181 EAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVIDGALRKGSRIRMIGTSAAYD 240

Query: 241 IERVGFFTPKMEQVEELGPGEIGFITAAIKEVADTRVGDTITDDRKPISEMLPGFKPAIP 300
           +ERVGFFTPKM+QV+ELGPGEIGFITAAIKEVADTRVGDTITDDRKP++EMLPGFKPAIP
Sbjct: 241 VERVGFFTPKMQQVDELGPGEIGFITAAIKEVADTRVGDTITDDRKPVTEMLPGFKPAIP 300

Query: 301 VVFCGLFPVDANDFETLRAAMGKLRLNDASFSYEMETSAALGFGFRC 347
           VVFCGLFPVDA+DFETLRAAMGKLRLNDASFS+EMETSAALGFGFRC
Sbjct: 301 VVFCGLFPVDADDFETLRAAMGKLRLNDASFSFEMETSAALGFGFRC 347