BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0133.0015.p         (129 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774787.1| PTS system IIA component [Bradyrhizobium japoni...   258   2e-67
ref|ZP_01044433.1| PTS system fructose subfamily IIA component [...   257   4e-67
ref|YP_575790.1| PTS system fructose subfamily IIA component [Ni...   256   9e-67
ref|YP_316964.1| PTS system fructose subfamily IIA component [Ni...   255   1e-66
ref|YP_484088.1| PTS system fructose subfamily IIA component [Rh...   254   2e-66

>ref|NP_774787.1| PTS system IIA component [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53412.1| PTS system IIA component [Bradyrhizobium japonicum USDA 110]
          Length = 133

 Score =  258 bits (659), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 127/129 (98%), Positives = 129/129 (100%)

Query: 1   VLVTHGRLADEFRAALEHVMGPQKQIEAITIGAEDDSDLCRSDIIEAVNRVDSGDGVAIL 60
           VLVTHGRLADEF+AALEHVMGPQKQIEAITIGAEDDSDLCRSDIIEAVNRVDSGDGVAIL
Sbjct: 5   VLVTHGRLADEFKAALEHVMGPQKQIEAITIGAEDDSDLCRSDIIEAVNRVDSGDGVAIL 64

Query: 61  TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREERSLPDAIAMAQEAGRKYVT 120
           TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREER+LPDAIAMAQEAGRKYVT
Sbjct: 65  TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREERALPDAIAMAQEAGRKYVT 124

Query: 121 IASRVLAGK 129
           IASRVLAGK
Sbjct: 125 IASRVLAGK 133


>ref|ZP_01044433.1| PTS system fructose subfamily IIA component [Nitrobacter sp.
           Nb-311A]
 gb|EAQ37214.1| PTS system fructose subfamily IIA component [Nitrobacter sp.
           Nb-311A]
          Length = 133

 Score =  257 bits (656), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 126/129 (97%), Positives = 129/129 (100%)

Query: 1   VLVTHGRLADEFRAALEHVMGPQKQIEAITIGAEDDSDLCRSDIIEAVNRVDSGDGVAIL 60
           VLVTHGRLADEF+AALEHVMGPQKQIEAITIGAEDD+DLCRSDIIEAVNRVDSGDGVAIL
Sbjct: 5   VLVTHGRLADEFKAALEHVMGPQKQIEAITIGAEDDADLCRSDIIEAVNRVDSGDGVAIL 64

Query: 61  TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREERSLPDAIAMAQEAGRKYVT 120
           TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREER+LPDAIAMAQEAGRKYVT
Sbjct: 65  TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREERTLPDAIAMAQEAGRKYVT 124

Query: 121 IASRVLAGK 129
           IASRVLAGK
Sbjct: 125 IASRVLAGK 133


>ref|YP_575790.1| PTS system fructose subfamily IIA component [Nitrobacter
           hamburgensis X14]
 gb|ABE61330.1| PTS system fructose subfamily IIA component [Nitrobacter
           hamburgensis X14]
          Length = 133

 Score =  256 bits (653), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 126/129 (97%), Positives = 128/129 (99%)

Query: 1   VLVTHGRLADEFRAALEHVMGPQKQIEAITIGAEDDSDLCRSDIIEAVNRVDSGDGVAIL 60
           VLVTHGRLADEF+AALEHVMGPQKQIEAITIGAEDD+DLCR DIIEAVNRVDSGDGVAIL
Sbjct: 5   VLVTHGRLADEFKAALEHVMGPQKQIEAITIGAEDDADLCRGDIIEAVNRVDSGDGVAIL 64

Query: 61  TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREERSLPDAIAMAQEAGRKYVT 120
           TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREERSLPDAIAMAQEAGRKYVT
Sbjct: 65  TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREERSLPDAIAMAQEAGRKYVT 124

Query: 121 IASRVLAGK 129
           IASRVLAGK
Sbjct: 125 IASRVLAGK 133


>ref|YP_316964.1| PTS system fructose subfamily IIA component [Nitrobacter
           winogradskyi Nb-255]
 gb|ABA03612.1| PTS system fructose subfamily IIA component [Nitrobacter
           winogradskyi Nb-255]
          Length = 133

 Score =  255 bits (652), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 125/129 (96%), Positives = 129/129 (100%)

Query: 1   VLVTHGRLADEFRAALEHVMGPQKQIEAITIGAEDDSDLCRSDIIEAVNRVDSGDGVAIL 60
           VLVTHGRLADEF+AALEHVMGPQKQIEAITIGA+DD+DLCRSDIIEAVNRVDSGDGVAIL
Sbjct: 5   VLVTHGRLADEFKAALEHVMGPQKQIEAITIGADDDADLCRSDIIEAVNRVDSGDGVAIL 64

Query: 61  TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREERSLPDAIAMAQEAGRKYVT 120
           TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREER+LPDAIAMAQEAGRKYVT
Sbjct: 65  TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREERTLPDAIAMAQEAGRKYVT 124

Query: 121 IASRVLAGK 129
           IASRVLAGK
Sbjct: 125 IASRVLAGK 133


>ref|YP_484088.1| PTS system fructose subfamily IIA component [Rhodopseudomonas
           palustris HaA2]
 ref|YP_779760.1| PTS system fructose subfamily IIA component [Rhodopseudomonas
           palustris BisA53]
 gb|ABD05177.1| PTS system fructose subfamily IIA component [Rhodopseudomonas
           palustris HaA2]
 gb|ABJ04780.1| PTS system fructose subfamily IIA component [Rhodopseudomonas
           palustris BisA53]
          Length = 133

 Score =  254 bits (650), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 124/129 (96%), Positives = 129/129 (100%)

Query: 1   VLVTHGRLADEFRAALEHVMGPQKQIEAITIGAEDDSDLCRSDIIEAVNRVDSGDGVAIL 60
           VLVTHGRLADEF+AALEHVMGPQKQIEA+TIGAEDD+DLCRSDIIEAVNRVDSGDGVAIL
Sbjct: 5   VLVTHGRLADEFKAALEHVMGPQKQIEAVTIGAEDDADLCRSDIIEAVNRVDSGDGVAIL 64

Query: 61  TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREERSLPDAIAMAQEAGRKYVT 120
           TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREER+LPDAIA+AQEAGRKYVT
Sbjct: 65  TDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVREERALPDAIALAQEAGRKYVT 124

Query: 121 IASRVLAGK 129
           IASRVLAGK
Sbjct: 125 IASRVLAGK 133