BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0133.0014.p         (146 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001243139.1| HPr kinase [Bradyrhizobium sp. BTAi1] >gi|14...   196   7e-49
ref|YP_001202902.1| putative HPr kinase/phosphorylase [Bradyrhiz...   192   1e-47
ref|YP_530489.1| HPr kinase [Rhodopseudomonas palustris BisB18] ...   191   2e-47
ref|NP_774786.1| hypothetical protein blr8146 [Bradyrhizobium ja...   188   3e-46
ref|YP_567508.1| HPr kinase [Rhodopseudomonas palustris BisB5] >...   187   4e-46

>ref|YP_001243139.1| HPr kinase [Bradyrhizobium sp. BTAi1]
 gb|ABQ39233.1| Hpr(Ser) kinase/phosphatase [Bradyrhizobium sp. BTAi1]
          Length = 150

 Score =  196 bits (499), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 102/142 (71%), Positives = 115/142 (80%)

Query: 5   SSVHASAVLVGERAVLIRGPSGAGKSRLAFDLILAGRTGALPPAILVGDDRVHLDTAGEQ 64
           ++VHASAV +GE AVLIRGPSG+GKSRLAFDLILAGRTG +PPA+LVGDDRVHL T   +
Sbjct: 6   ATVHASAVKIGESAVLIRGPSGSGKSRLAFDLILAGRTGQIPPAVLVGDDRVHLATRDGE 65

Query: 65  LWVRPVQQLAGLIEIRGLGIRHCPFAGEAVVGLVVDLAADDAERLPPPEALTIRLNGVLI 124
           +WV P   LAGLIEIRGLGIR C F  EA +GLVVDL A+DAERLPP  AL +  NG+ +
Sbjct: 66  MWVHPAPALAGLIEIRGLGIRRCDFVSEARIGLVVDLMAEDAERLPPRSALLLHENGIEL 125

Query: 125 PRIPVGIGFQPLPLVVAALTTT 146
           PRIPVG G  PLPLVVAAL TT
Sbjct: 126 PRIPVGAGHSPLPLVVAALLTT 147


>ref|YP_001202902.1| putative HPr kinase/phosphorylase [Bradyrhizobium sp. ORS 278]
 emb|CAL74662.1| Putative HPr kinase/phosphorylase [Bradyrhizobium sp. ORS 278]
          Length = 150

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 100/141 (70%), Positives = 116/141 (82%)

Query: 6   SVHASAVLVGERAVLIRGPSGAGKSRLAFDLILAGRTGALPPAILVGDDRVHLDTAGEQL 65
           +VHASAV VG+RAVLIRGPSG+GKSRLAFDLILAGR G +PPA+LVGDDRVHL T G ++
Sbjct: 7   TVHASAVKVGDRAVLIRGPSGSGKSRLAFDLILAGRAGQIPPAVLVGDDRVHLATRGGEM 66

Query: 66  WVRPVQQLAGLIEIRGLGIRHCPFAGEAVVGLVVDLAADDAERLPPPEALTIRLNGVLIP 125
           WV P  QLAGLIEIRGLGIR C    +A +GL+VDL A+DA RLPP  AL  + NG+ +P
Sbjct: 67  WVSPAPQLAGLIEIRGLGIRACDHVSDAPIGLIVDLMAEDAARLPPRHALRWQQNGIELP 126

Query: 126 RIPVGIGFQPLPLVVAALTTT 146
           RIPVG G++PL LVVAALTTT
Sbjct: 127 RIPVGRGYEPLLLVVAALTTT 147


>ref|YP_530489.1| HPr kinase [Rhodopseudomonas palustris BisB18]
 gb|ABD86170.1| Hpr(Ser) kinase/phosphatase [Rhodopseudomonas palustris BisB18]
          Length = 180

 Score =  191 bits (486), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 100/144 (69%), Positives = 115/144 (79%)

Query: 2   SDNSSVHASAVLVGERAVLIRGPSGAGKSRLAFDLILAGRTGALPPAILVGDDRVHLDTA 61
           S + +VHASAV VG+RAVLIRGPSGAGKSRLAFDL+LAGR G +P A+L+GDDRVHL+  
Sbjct: 9   SGSGTVHASAVKVGDRAVLIRGPSGAGKSRLAFDLMLAGRAGMIPAAMLIGDDRVHLERR 68

Query: 62  GEQLWVRPVQQLAGLIEIRGLGIRHCPFAGEAVVGLVVDLAADDAERLPPPEALTIRLNG 121
            + L VR    +AGLIEIRGLG+R C F  EAVVGLVVDLAA DAERLP P AL   +NG
Sbjct: 69  ADGLVVRAAAAIAGLIEIRGLGLRRCDFVAEAVVGLVVDLAAGDAERLPQPAALRTTING 128

Query: 122 VLIPRIPVGIGFQPLPLVVAALTT 145
           V +PRIPVG  ++PLPLVVAA TT
Sbjct: 129 VELPRIPVGESYEPLPLVVAAFTT 152


>ref|NP_774786.1| hypothetical protein blr8146 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53411.1| blr8146 [Bradyrhizobium japonicum USDA 110]
          Length = 174

 Score =  188 bits (477), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/147 (70%), Positives = 114/147 (77%), Gaps = 1/147 (0%)

Query: 1   MSDNS-SVHASAVLVGERAVLIRGPSGAGKSRLAFDLILAGRTGALPPAILVGDDRVHLD 59
           MSD   SVHASAV VG  AVLIRGPSG+GKSRLAFDLI+AGR G +  A+LVGDDRVHL 
Sbjct: 1   MSDGGPSVHASAVKVGNLAVLIRGPSGSGKSRLAFDLIMAGRAGVVERAVLVGDDRVHLA 60

Query: 60  TAGEQLWVRPVQQLAGLIEIRGLGIRHCPFAGEAVVGLVVDLAADDAERLPPPEALTIRL 119
           T G+++ VRP   LAGLIEIRGLGIR C F   A VGLVVDLAA DAERLPP E+L   +
Sbjct: 61  TVGDEIEVRPAPPLAGLIEIRGLGIRRCDFVEHATVGLVVDLAAADAERLPPAESLKTSI 120

Query: 120 NGVLIPRIPVGIGFQPLPLVVAALTTT 146
            GV IPRIPV   + PLPLVVAALTTT
Sbjct: 121 LGVEIPRIPVSRDYSPLPLVVAALTTT 147


>ref|YP_567508.1| HPr kinase [Rhodopseudomonas palustris BisB5]
 gb|ABE37607.1| Hpr(Ser) kinase/phosphatase [Rhodopseudomonas palustris BisB5]
          Length = 153

 Score =  187 bits (475), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 98/142 (69%), Positives = 115/142 (80%)

Query: 4   NSSVHASAVLVGERAVLIRGPSGAGKSRLAFDLILAGRTGALPPAILVGDDRVHLDTAGE 63
           +SSVHASAV VG+ AVLIRGPSG+GKSRLAF LI+AGRTG +P A L+GDDRV L+    
Sbjct: 6   SSSVHASAVRVGDHAVLIRGPSGSGKSRLAFGLIVAGRTGQIPDAELIGDDRVFLERRDG 65

Query: 64  QLWVRPVQQLAGLIEIRGLGIRHCPFAGEAVVGLVVDLAADDAERLPPPEALTIRLNGVL 123
           +LWVRP  +LAG+IE+RGLGIR CP A EAV+GL+VDLAADDA RLP   A+ IR+ GV 
Sbjct: 66  RLWVRPAPELAGMIEVRGLGIRRCPNAPEAVIGLIVDLAADDAARLPEAAAMQIRIEGVE 125

Query: 124 IPRIPVGIGFQPLPLVVAALTT 145
           +PR+PV   F PLPLVVAALTT
Sbjct: 126 LPRVPVAAEFDPLPLVVAALTT 147