BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0133.0011.p (244 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774783.1| hypothetical protein bll8143 [Bradyrhizobium ja... 394 e-108 ref|YP_575794.1| pyridoxamine 5'-phosphate oxidase-related, FMN-... 352 2e-95 ref|YP_316968.1| pyridoxamine 5'-phosphate oxidase-related, FMN-... 352 3e-95 ref|YP_001243136.1| hypothetical protein BBta_7366 [Bradyrhizobi... 350 1e-94 ref|YP_001202905.1| putative pyridoxamine 5'-phosphate oxidase-l... 348 5e-94 >ref|NP_774783.1| hypothetical protein bll8143 [Bradyrhizobium japonicum USDA 110] dbj|BAC53408.1| bll8143 [Bradyrhizobium japonicum USDA 110] Length = 249 Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust. Identities = 194/243 (79%), Positives = 214/243 (88%), Gaps = 1/243 (0%) Query: 1 MQPTADFDPAHLARSLLRRSRQGALATLMADTGDPYCSLVNLASHPDGSPILLISRLALH 60 MQPT DFDP LA+SLLRRSRQGALATLM +GDPYCSLVNLASHPDGSPILLIS LA+H Sbjct: 1 MQPTPDFDPGKLAKSLLRRSRQGALATLMVGSGDPYCSLVNLASHPDGSPILLISALAVH 60 Query: 61 TKNILADSRVSLMLDERAEGDPLEGARIMLAGQAEEVAEAGRELVRRRYIGAHPSAEAFV 120 T+NILADSRVSLMLDERA GDPLEGARIML+G+AE+ A A ++L+ RRY+ AHPSAEAFV Sbjct: 61 TRNILADSRVSLMLDERAAGDPLEGARIMLSGRAEQ-AGAEKDLLERRYLNAHPSAEAFV 119 Query: 121 EFKDFSFFRIKPSGAHLVAGFGRIVDLKPAQFLTDLGGAEGLLEAEPGAVAHMNEDHREA 180 FKDFSFFRI+P+G HLVAGFGRIVDLKP QFLTDL GAE L+ AE GAV HMN DHR+A Sbjct: 120 SFKDFSFFRIRPTGTHLVAGFGRIVDLKPEQFLTDLSGAEDLMAAEEGAVEHMNADHRDA 179 Query: 181 MNLYATRLLGAGSADWLCTGCDPDGMDMQAGRDTLRLDFPERVTTGTELRKMLVRLAGEA 240 M LYATRLLGA + DW CTGCDP+G+DMQ G+ LRLDFPERVT+GT LRKMLVRLAGEA Sbjct: 180 MGLYATRLLGAAAGDWRCTGCDPEGLDMQDGQTALRLDFPERVTSGTALRKMLVRLAGEA 239 Query: 241 RAK 243 RAK Sbjct: 240 RAK 242 >ref|YP_575794.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding [Nitrobacter hamburgensis X14] gb|ABE61334.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein [Nitrobacter hamburgensis X14] Length = 247 Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 172/243 (70%), Positives = 201/243 (82%), Gaps = 1/243 (0%) Query: 1 MQPTADFDPAHLARSLLRRSRQGALATLMADTGDPYCSLVNLASHPDGSPILLISRLALH 60 MQPTA+F A+LARSLLRRSRQGALATLM +GDPYCSLVN+ASH DGS ILLISRLA+H Sbjct: 1 MQPTANFTAANLARSLLRRSRQGALATLMTGSGDPYCSLVNVASHYDGSSILLISRLAVH 60 Query: 61 TKNILADSRVSLMLDERAEGDPLEGARIMLAGQAEEVAEAGRELVRRRYIGAHPSAEAFV 120 TKN++AD+RVSLMLDERAEGDPLEG+RIM+AG AEE R +RRRY+ AHPSAE+F Sbjct: 61 TKNVIADTRVSLMLDERAEGDPLEGSRIMVAGTAEEAGGELRTTLRRRYLNAHPSAESFA 120 Query: 121 EFKDFSFFRIKPSGAHLVAGFGRIVDLKPAQFLTDLGGAEGLLEAEPGAVAHMNEDHREA 180 +F DFSFFRI+P+G HLVAGFGRIVDLKP + LT L GAE LLEAE A+ HMN DHR+A Sbjct: 121 DFNDFSFFRIRPTGVHLVAGFGRIVDLKPEKILTSLEGAEALLEAEQSAIDHMNADHRDA 180 Query: 181 MNLYATRLLGAGSADWLCTGCDPDGMDMQAGRDT-LRLDFPERVTTGTELRKMLVRLAGE 239 +NLYAT+LLGA +ADW CTGCDPDG+D+ A + + LRLDFP R+ ELR +L LA + Sbjct: 181 LNLYATQLLGAETADWRCTGCDPDGLDISADKHSALRLDFPRRIVAPAELRVVLKELAEK 240 Query: 240 ARA 242 ARA Sbjct: 241 ARA 243 >ref|YP_316968.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding [Nitrobacter winogradskyi Nb-255] gb|ABA03616.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein [Nitrobacter winogradskyi Nb-255] Length = 245 Score = 352 bits (902), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 176/243 (72%), Positives = 198/243 (81%), Gaps = 1/243 (0%) Query: 1 MQPTADFDPAHLARSLLRRSRQGALATLMADTGDPYCSLVNLASHPDGSPILLISRLALH 60 MQPTA+F A+L RSLLRRSRQGALATLMA +GDPYCSLVN+ASH DGSPILLISRLA+H Sbjct: 1 MQPTANFTAANLTRSLLRRSRQGALATLMAGSGDPYCSLVNVASHYDGSPILLISRLAVH 60 Query: 61 TKNILADSRVSLMLDERAEGDPLEGARIMLAGQAEEVAEAGRELVRRRYIGAHPSAEAFV 120 TKN+LAD RVSLMLDERA GDPLEG+RIM+AG AEE + ++RRRY+ HPSAE F Sbjct: 61 TKNLLADPRVSLMLDERAAGDPLEGSRIMVAGTAEEADGELKAVLRRRYLNVHPSAEGFA 120 Query: 121 EFKDFSFFRIKPSGAHLVAGFGRIVDLKPAQFLTDLGGAEGLLEAEPGAVAHMNEDHREA 180 +F DFSFFRI+ SG HLVAGFGRIVDLKP + LT L GAE L+ AE A+ HMN DHREA Sbjct: 121 DFNDFSFFRIRLSGVHLVAGFGRIVDLKPEKVLTSLDGAEALVAAEQNAIEHMNRDHREA 180 Query: 181 MNLYATRLLGAGSADWLCTGCDPDGMDMQAGR-DTLRLDFPERVTTGTELRKMLVRLAGE 239 +NLYATRLLGA +ADW CTGCDPDG+DM A R D LRLDFP RV T ELR +L LA + Sbjct: 181 LNLYATRLLGAAAADWRCTGCDPDGLDMSADRHDALRLDFPRRVATPDELRVILKDLAEK 240 Query: 240 ARA 242 ARA Sbjct: 241 ARA 243 >ref|YP_001243136.1| hypothetical protein BBta_7366 [Bradyrhizobium sp. BTAi1] gb|ABQ39230.1| hypothetical protein BBta_7366 [Bradyrhizobium sp. BTAi1] Length = 242 Score = 350 bits (897), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 172/243 (70%), Positives = 200/243 (82%), Gaps = 2/243 (0%) Query: 1 MQPTADFDPAHLARSLLRRSRQGALATLMADTGDPYCSLVNLASHPDGSPILLISRLALH 60 MQP+ F+P + SLLRRSRQGALATLM +GDPYCSLVN+A+ PDG+P++LISRLA+H Sbjct: 1 MQPS--FNPNLVTHSLLRRSRQGALATLMMGSGDPYCSLVNVATAPDGAPVILISRLAVH 58 Query: 61 TKNILADSRVSLMLDERAEGDPLEGARIMLAGQAEEVAEAGRELVRRRYIGAHPSAEAFV 120 TKN+L DSRVSLMLDERA GDPLEGARIML+G+AE+ RE++RRRY+ AHPSA + Sbjct: 59 TKNVLTDSRVSLMLDERAPGDPLEGARIMLSGKAEQATAENREMLRRRYLNAHPSAADYA 118 Query: 121 EFKDFSFFRIKPSGAHLVAGFGRIVDLKPAQFLTDLGGAEGLLEAEPGAVAHMNEDHREA 180 +F DFSFF I+PSG HLVAGFGRIVDLKP QFLTD+ A LL AE GAV HMNEDHREA Sbjct: 119 DFADFSFFVIRPSGTHLVAGFGRIVDLKPEQFLTDISDAAELLAAEQGAVDHMNEDHREA 178 Query: 181 MNLYATRLLGAGSADWLCTGCDPDGMDMQAGRDTLRLDFPERVTTGTELRKMLVRLAGEA 240 + LYATRLLGA +A+W C+GCDPDG+D+ A TLRL FPERVT+ LRKMLVRLA EA Sbjct: 179 LGLYATRLLGAEAAEWRCSGCDPDGLDLMAAGRTLRLQFPERVTSPGGLRKMLVRLADEA 238 Query: 241 RAK 243 RAK Sbjct: 239 RAK 241 >ref|YP_001202905.1| putative pyridoxamine 5'-phosphate oxidase-like, FMN-binding [Bradyrhizobium sp. ORS 278] emb|CAL74665.1| conserved hypothetical protein; putative Pyridoxamine 5'-phosphate oxidase-related, FMN-binding [Bradyrhizobium sp. ORS 278] Length = 243 Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 168/240 (70%), Positives = 198/240 (82%) Query: 4 TADFDPAHLARSLLRRSRQGALATLMADTGDPYCSLVNLASHPDGSPILLISRLALHTKN 63 T F+P H+ RSLLRRSRQGALATLM +GDPYCSLVN+A+ DG+PI+LISRLA+HTKN Sbjct: 2 TPSFNPNHVTRSLLRRSRQGALATLMTGSGDPYCSLVNVATAADGAPIILISRLAVHTKN 61 Query: 64 ILADSRVSLMLDERAEGDPLEGARIMLAGQAEEVAEAGRELVRRRYIGAHPSAEAFVEFK 123 +LADSRVSLMLDERA GDPLEGARIML+G+AE+ + ++ +RRRY+ HPSA + +F Sbjct: 62 VLADSRVSLMLDERAPGDPLEGARIMLSGKAEQATDENKDALRRRYLNVHPSAADYADFA 121 Query: 124 DFSFFRIKPSGAHLVAGFGRIVDLKPAQFLTDLGGAEGLLEAEPGAVAHMNEDHREAMNL 183 DFSFF I+P+G HLVAGFGRIVDLKP QFLTD+ A LL AE GAV HMNEDHR+A+ L Sbjct: 122 DFSFFLIRPAGTHLVAGFGRIVDLKPEQFLTDVSDAAELLAAEQGAVDHMNEDHRDALGL 181 Query: 184 YATRLLGAGSADWLCTGCDPDGMDMQAGRDTLRLDFPERVTTGTELRKMLVRLAGEARAK 243 YAT+LLGA +A+W C+GCDPDG+D+ A TLRLDFPERV T LRKMLVRLA EARAK Sbjct: 182 YATKLLGADAAEWRCSGCDPDGLDLMAEGKTLRLDFPERVATPGALRKMLVRLADEARAK 241