BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0132.0038.p (427 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_587680.1| Formyl-coenzyme A transferase [Cupriavidus meta... 632 e-179 ref|YP_552971.1| putative L-carnitine dehydratase/bile acid- ind... 611 e-173 ref|YP_557504.1| putative L-carnitine dehydratase [Burkholderia ... 599 e-169 ref|YP_001629831.1| acyl-CoA transferase/carnitine dehydratase [... 585 e-165 ref|ZP_03546226.1| L-carnitine dehydratase/bile acid-inducible p... 521 e-146 >ref|YP_587680.1| Formyl-coenzyme A transferase [Cupriavidus metallidurans CH34] gb|ABF12411.1| putative Formyl-coenzyme A transferase (Formyl-CoA transferase; carnitine dehydratase) [Cupriavidus metallidurans CH34] Length = 429 Score = 632 bits (1629), Expect = e-179, Method: Compositional matrix adjust. Identities = 306/427 (71%), Positives = 349/427 (81%), Gaps = 2/427 (0%) Query: 1 MLDQLEADFPEHTPRPAGAPAALEGIRVIDFSHFIAGPFATMILADMGAEVIKIEAPSRG 60 ML+ +EADFP H PRPA AP AL+G+RV+DF+HFIAGPFATM+LADMGA+VIKIEAP RG Sbjct: 1 MLNNIEADFPPHVPRPADAPTALDGLRVVDFTHFIAGPFATMMLADMGADVIKIEAPGRG 60 Query: 61 DDLRRYPPVHPDLRHGAPFLWTNRNKRSITLDLKSAEGLKVARELIATADVVVENFSASV 120 DD R+YPPVH DL GAPFLW+NRNKRSI +DLK+ EGL VARELIA+ADVVVENFS V Sbjct: 61 DDFRQYPPVHSDLGQGAPFLWSNRNKRSIAIDLKTPEGLDVARELIASADVVVENFSTGV 120 Query: 121 MARLGLDYESCRKIKPEIIYCSVSAYGRDGAFSDRLGFDPIAQVESGFVSMNGYADREGV 180 M R GLDY +C+ P ++YCSVSAYGR GAF+DRLGFDPIAQ ESGFVSMNGY+DREGV Sbjct: 121 MERFGLDYATCKADNPRLVYCSVSAYGRTGAFADRLGFDPIAQAESGFVSMNGYSDREGV 180 Query: 181 RALSPVMDISTAMMASNAILGALFARERSGHGQAIEVSLFENAVLMTGYATTQSLFSGAD 240 RALSPVMDISTAMMA NAILGAL ARE+SG GQA+E++LF+NAVLMTGYA Q LFSGAD Sbjct: 181 RALSPVMDISTAMMACNAILGALLAREKSGKGQAVEIALFDNAVLMTGYAPMQYLFSGAD 240 Query: 241 PKRSGNTSPDTCPSGVFRASDCSFYINCGNDKIFQRLMAQVLEREDLAGAEIYATGPDRI 300 P+R GNTSPDTCPSGVF+A D SFYIN GN+ IFQRLM QV+ R +LA YATG R Sbjct: 241 PQRHGNTSPDTCPSGVFKAKDKSFYINSGNNGIFQRLMTQVIGRPELAADPNYATGDLRR 300 Query: 301 RRREELFAILGDAFARQPWSHWQSRMRAAGVPCGHLRTVGEAIRSPEARERGIVTRIPHE 360 RR+ELF ILG+AFA PWSHWQ MRAAG+P G LR+VG+AIRSPEARE IV+RIPH Sbjct: 301 ARRDELFEILGNAFAEHPWSHWQGLMRAAGIPSGELRSVGDAIRSPEARESRIVSRIPHP 360 Query: 361 TVGWVPNVNLPIRYSRTPIVDPVAAPAVGQHTENVLLELLGY--DKTEIARLAGGGAFGS 418 VGWVPN+ PIRYS TP+VDP APAVG+HT VL ++LGY DK E R AGG G Sbjct: 361 KVGWVPNIASPIRYSDTPMVDPTPAPAVGEHTLEVLRDVLGYDDDKVEGLRRAGGLGKGQ 420 Query: 419 EALRQDA 425 L +++ Sbjct: 421 RELSKES 427 >ref|YP_552971.1| putative L-carnitine dehydratase/bile acid- inducible protein F [Burkholderia xenovorans LB400] gb|ABE33621.1| Putative L-carnitine dehydratase/bile acid- inducible protein F [Burkholderia xenovorans LB400] Length = 435 Score = 611 bits (1575), Expect = e-173, Method: Compositional matrix adjust. Identities = 287/403 (71%), Positives = 335/403 (83%), Gaps = 1/403 (0%) Query: 1 MLDQLEADFPEHTPRPAGAPAALEGIRVIDFSHFIAGPFATMILADMGAEVIKIEAPSRG 60 ML +L +FPEH PRPA AP AL GIRV+DF+HFIAGPFATM+LADMGAEVIKIEAP RG Sbjct: 1 MLSRLVNEFPEHEPRPANAPKALAGIRVVDFTHFIAGPFATMMLADMGAEVIKIEAPGRG 60 Query: 61 DDLRRYPPVHP-DLRHGAPFLWTNRNKRSITLDLKSAEGLKVARELIATADVVVENFSAS 119 D+ R YPP HP D G P+LW NRNKRSI LDLKSAEG ++AREL+ATAD+V ENFS Sbjct: 61 DEFRYYPPAHPEDASIGGPYLWANRNKRSIALDLKSAEGRRIARELVATADIVAENFSTG 120 Query: 120 VMARLGLDYESCRKIKPEIIYCSVSAYGRDGAFSDRLGFDPIAQVESGFVSMNGYADREG 179 VM RLGL YE+CR++ P++IYCSVSAYGR+GAF+DRLGFDPIAQ ESGFVSMNGY DR G Sbjct: 121 VMERLGLSYEACRELNPQVIYCSVSAYGREGAFADRLGFDPIAQAESGFVSMNGYPDRLG 180 Query: 180 VRALSPVMDISTAMMASNAILGALFARERSGHGQAIEVSLFENAVLMTGYATTQSLFSGA 239 VRALSPVMDISTAMMASNA+LGAL ARER+G GQA+EVSLF+NAVLMTGYAT Q LF+G Sbjct: 181 VRALSPVMDISTAMMASNAMLGALVARERTGKGQAVEVSLFDNAVLMTGYATVQHLFTGE 240 Query: 240 DPKRSGNTSPDTCPSGVFRASDCSFYINCGNDKIFQRLMAQVLEREDLAGAEIYATGPDR 299 +P+R GNTSPDTCPSGVF+A+D +FYINCGNDKIF RL QVLE +LA + A R Sbjct: 241 EPRRHGNTSPDTCPSGVFKAADKAFYINCGNDKIFHRLANQVLEMPELAADPVLADRNGR 300 Query: 300 IRRREELFAILGDAFARQPWSHWQSRMRAAGVPCGHLRTVGEAIRSPEARERGIVTRIPH 359 I RR+ELF IL +AF R PW+HWQ RMRAA +PCG +RTVGEA+RSPEARER +V+R+ H Sbjct: 301 IARRDELFRILDEAFIRHPWAHWQQRMRAASIPCGEVRTVGEALRSPEARERKLVSRLEH 360 Query: 360 ETVGWVPNVNLPIRYSRTPIVDPVAAPAVGQHTENVLLELLGY 402 +GW+PN+NLP R+S TPI DP AP VG+H+ ++L E+LGY Sbjct: 361 PELGWLPNINLPFRFSETPIDDPSPAPRVGEHSRSILTEVLGY 403 >ref|YP_557504.1| putative L-carnitine dehydratase [Burkholderia xenovorans LB400] gb|ABE29452.1| Putative L-carnitine dehydratase [Burkholderia xenovorans LB400] Length = 427 Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust. Identities = 285/419 (68%), Positives = 338/419 (80%), Gaps = 1/419 (0%) Query: 1 MLDQLEADFPEHTPRPAGAPAALEGIRVIDFSHFIAGPFATMILADMGAEVIKIEAPSRG 60 ML L ++FP+H PRPA AP ALEGIRV+DF+HFIAGPFATM+LADMGAEVIKIEAP RG Sbjct: 1 MLSNLVSEFPQHEPRPANAPRALEGIRVVDFTHFIAGPFATMMLADMGAEVIKIEAPGRG 60 Query: 61 DDLRRYPPVHP-DLRHGAPFLWTNRNKRSITLDLKSAEGLKVARELIATADVVVENFSAS 119 D+ R YPP HP D GAP+LW NRNKRSI LDLK +G ++ARELIATADVV ENFS Sbjct: 61 DEFRYYPPAHPQDESIGAPYLWANRNKRSIALDLKHEDGRRIARELIATADVVAENFSTG 120 Query: 120 VMARLGLDYESCRKIKPEIIYCSVSAYGRDGAFSDRLGFDPIAQVESGFVSMNGYADREG 179 VM RLGL YE+CR+ PE+IYCSVSAYGR+GAF+DRLGFDP+AQ ESGFVSMNGY DR G Sbjct: 121 VMERLGLGYEACRESNPELIYCSVSAYGREGAFADRLGFDPVAQAESGFVSMNGYPDRLG 180 Query: 180 VRALSPVMDISTAMMASNAILGALFARERSGHGQAIEVSLFENAVLMTGYATTQSLFSGA 239 VRALSPVMDISTAMMASNAILGAL ARERSG GQA+EVSLF+NAVLMTGYAT Q LF+G Sbjct: 181 VRALSPVMDISTAMMASNAILGALVARERSGKGQAVEVSLFDNAVLMTGYATVQHLFTGD 240 Query: 240 DPKRSGNTSPDTCPSGVFRASDCSFYINCGNDKIFQRLMAQVLEREDLAGAEIYATGPDR 299 +P+R GNTSPDTCPSGVF+ASD +FYINCGN+KIF RL +QVLE +LA + A R Sbjct: 241 EPQRHGNTSPDTCPSGVFKASDGAFYINCGNNKIFHRLASQVLEMPELAADPVLADRNGR 300 Query: 300 IRRREELFAILGDAFARQPWSHWQSRMRAAGVPCGHLRTVGEAIRSPEARERGIVTRIPH 359 I RR+ELF IL +AF R PW++WQ RMRAA +PCG +R+VGEA+RS EARER +V+R+ H Sbjct: 301 IARRDELFRILDEAFIRHPWAYWQQRMRAASIPCGEVRSVGEALRSAEARERKLVSRLEH 360 Query: 360 ETVGWVPNVNLPIRYSRTPIVDPVAAPAVGQHTENVLLELLGYDKTEIARLAGGGAFGS 418 +GW+PN++LP R+S TP+ DP AP +G+H+ ++L +LGY+ + L G S Sbjct: 361 PDLGWLPNISLPFRFSETPMEDPSPAPRIGEHSRDILTHVLGYEDDSASALLDSGVVYS 419 >ref|YP_001629831.1| acyl-CoA transferase/carnitine dehydratase [Bordetella petrii DSM 12804] emb|CAP41561.1| Probable acyl-CoA transferase/carnitine dehydratase [Bordetella petrii] Length = 433 Score = 585 bits (1507), Expect = e-165, Method: Compositional matrix adjust. Identities = 274/418 (65%), Positives = 332/418 (79%) Query: 1 MLDQLEADFPEHTPRPAGAPAALEGIRVIDFSHFIAGPFATMILADMGAEVIKIEAPSRG 60 M L DFPEHTPRP GA +AL+ IRV+DF+H+IAGPFAT I+ADMGA+V+KIE P +G Sbjct: 15 MSKALLDDFPEHTPRPPGADSALQNIRVVDFTHYIAGPFATAIMADMGADVVKIEFPGKG 74 Query: 61 DDLRRYPPVHPDLRHGAPFLWTNRNKRSITLDLKSAEGLKVARELIATADVVVENFSASV 120 DD R+YPPV+ ++ GAPFLW NRNKRSI +DLKS G VA +LIA ADVVVENFS V Sbjct: 75 DDFRQYPPVNAEIGGGAPFLWCNRNKRSIAIDLKSPHGKAVAMDLIAKADVVVENFSTGV 134 Query: 121 MARLGLDYESCRKIKPEIIYCSVSAYGRDGAFSDRLGFDPIAQVESGFVSMNGYADREGV 180 M +LGL YE+C+K+ P +I+CS+SAYGR+GA++DRLGFDPIAQ ESGFVSMNGY DR+GV Sbjct: 135 MEKLGLGYETCKKLNPALIFCSISAYGREGAYADRLGFDPIAQAESGFVSMNGYPDRDGV 194 Query: 181 RALSPVMDISTAMMASNAILGALFARERSGHGQAIEVSLFENAVLMTGYATTQSLFSGAD 240 RALSPVMDISTAMMASNAILGAL + R+G GQ +EV LF NAVLMTGYA Q LF+G + Sbjct: 195 RALSPVMDISTAMMASNAILGALVYKTRTGKGQFVEVPLFHNAVLMTGYAPLQHLFTGRE 254 Query: 241 PKRSGNTSPDTCPSGVFRASDCSFYINCGNDKIFQRLMAQVLEREDLAGAEIYATGPDRI 300 P+R GNTSPDTCPSGVF ASD F+INCG+ IFQRL+ QV++ +A YAT DR+ Sbjct: 255 PQRPGNTSPDTCPSGVFHASDRPFFINCGSTAIFQRLLTQVMDLPQMAADPAYATNKDRL 314 Query: 301 RRREELFAILGDAFARQPWSHWQSRMRAAGVPCGHLRTVGEAIRSPEARERGIVTRIPHE 360 ++EE+FA+L + F++QPW +W+ RMR GVP G +R+VG+AIRSPEARE IVTRIPH Sbjct: 315 EKKEEIFALLQEQFSKQPWDYWKVRMREIGVPNGEIRSVGDAIRSPEARECNIVTRIPHP 374 Query: 361 TVGWVPNVNLPIRYSRTPIVDPVAAPAVGQHTENVLLELLGYDKTEIARLAGGGAFGS 418 +GW+PNV LPI+Y TP+VDPVAAP +GQ TE VL + LGYD I +L GAFGS Sbjct: 375 AIGWIPNVALPIKYRDTPLVDPVAAPMIGQETEAVLADWLGYDDAAIRKLKLDGAFGS 432 >ref|ZP_03546226.1| L-carnitine dehydratase/bile acid-inducible protein F [Comamonas testosteroni KF-1] gb|EED70512.1| L-carnitine dehydratase/bile acid-inducible protein F [Comamonas testosteroni KF-1] Length = 422 Score = 521 bits (1343), Expect = e-146, Method: Compositional matrix adjust. Identities = 246/418 (58%), Positives = 308/418 (73%), Gaps = 1/418 (0%) Query: 2 LDQLEADFPEHTPRPAGAPAALEGIRVIDFSHFIAGPFATMILADMGAEVIKIEAPSRGD 61 LDQ+E P TPRPA AP AL GIRV+DFSHFIAGP+ATM+LAD GA+VIKIE P++GD Sbjct: 4 LDQIEQKLPLPTPRPADAPKALAGIRVVDFSHFIAGPYATMMLADFGADVIKIETPAKGD 63 Query: 62 DLRRYPPVHPDL-RHGAPFLWTNRNKRSITLDLKSAEGLKVARELIATADVVVENFSASV 120 D R YPP PD+ G F +TNRNKRS+ LDLK+ L V RELIA ADV+VENFS V Sbjct: 64 DFRHYPPTDPDMPAQGGSFFFTNRNKRSVALDLKNPAALAVVRELIAQADVLVENFSTGV 123 Query: 121 MARLGLDYESCRKIKPEIIYCSVSAYGRDGAFSDRLGFDPIAQVESGFVSMNGYADREGV 180 M R GLD ++C K+ P ++YCSV AY R+G F+DR GFDP+ Q ESGF+SMNG+ADR+GV Sbjct: 124 MQRFGLDPDTCLKLNPRLVYCSVPAYSREGEFADRPGFDPVVQAESGFMSMNGHADRDGV 183 Query: 181 RALSPVMDISTAMMASNAILGALFARERSGHGQAIEVSLFENAVLMTGYATTQSLFSGAD 240 RALSPVMD+ T++M SN +L AL AR +G GQ EVSLF+ ++ M YA Q LF+G + Sbjct: 184 RALSPVMDMGTSLMVSNTVLAALMARHTTGKGQYCEVSLFDTSMAMLAYAPMQYLFAGME 243 Query: 241 PKRSGNTSPDTCPSGVFRASDCSFYINCGNDKIFQRLMAQVLEREDLAGAEIYATGPDRI 300 P+R+GN SPDT PSGVF +D SFY+N GND+IF+RL+ VLER D+ + RI Sbjct: 244 PQRNGNVSPDTSPSGVFHCTDASFYVNSGNDRIFERLVGGVLERPDVVADPRFNHRAGRI 303 Query: 301 RRREELFAILGDAFARQPWSHWQSRMRAAGVPCGHLRTVGEAIRSPEARERGIVTRIPHE 360 + R ELF IL AFA +PW+HW+ + RAAGVP G +RTV +A+ S E RG++TRIPH Sbjct: 304 KHRAELFPILEKAFADKPWAHWRDKFRAAGVPSGEVRTVPQALASAEVAARGLLTRIPHP 363 Query: 361 TVGWVPNVNLPIRYSRTPIVDPVAAPAVGQHTENVLLELLGYDKTEIARLAGGGAFGS 418 GWVPN+ P R TP+VDPVAAPA+GQHT+ VL+E+LGY ++A+L GAFG+ Sbjct: 364 VAGWVPNLTPPTRLKDTPVVDPVAAPALGQHTDEVLIEVLGYGADKLAQLRTAGAFGA 421