BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0132.0025.p (535 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_552028.1| carboxyl transferase [Polaromonas sp. JS666] >g... 742 0.0 ref|ZP_01037645.1| probable propionyl-CoA carboxylase (beta subu... 716 0.0 ref|ZP_01000035.1| Carboxyl transferase [Oceanicola batsensis HT... 715 0.0 ref|YP_004387536.1| methylcrotonoyl-CoA carboxylase [Alicycliphi... 660 0.0 ref|YP_004127503.1| methylcrotonoyl-CoA carboxylase [Alicycliphi... 656 0.0 >ref|YP_552028.1| carboxyl transferase [Polaromonas sp. JS666] gb|ABE47130.1| carboxyl transferase [Polaromonas sp. JS666] Length = 535 Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/535 (65%), Positives = 418/535 (78%) Query: 1 MAIMKSDVVTSTEDYARNRSAYTERVADLRRRRAMAALGGPERARKLHKERDQLLPRERI 60 M I+ S V TS +++ NR AY +ADL++RR +A GGP +AR+ H R+++LPR R+ Sbjct: 1 MTILTSRVSTSDDEFRLNREAYEAVIADLQKRRQLALAGGPPKAREKHLARNKILPRHRV 60 Query: 61 AALIDPGSPFLEFCQLAGDGLYEGVPPGGSIITGVGMISDRPCMIIANEPTVKGGTYYGI 120 L+DPGSPFLE LAG+G+Y+GVPPG SIITG+G++ RPCMIIAN+ TVKGGTYYG+ Sbjct: 61 EVLLDPGSPFLEVGMLAGEGMYDGVPPGASIITGIGLVQGRPCMIIANDATVKGGTYYGM 120 Query: 121 TCKKHVRAQRFAWQHRLPCVTLVQSGGANLPDQPNIFPDDGQFGSIFYNQVRMSAEGIPQ 180 TCKKHVRAQ+ AW HRLPC+TLV SGGA LP+ +IFPD GQFGSIF NQVRMSAEGI Q Sbjct: 121 TCKKHVRAQQIAWAHRLPCITLVDSGGAFLPEMAHIFPDVGQFGSIFNNQVRMSAEGIQQ 180 Query: 181 IAVVHGPSTAGGAYIPALSDETVIIRNQGAMFLGGPQLVYAATREEVGIEALGGGEMHSR 240 IAVV GP TAGGAYIPAL DE VI++ QG M+LGGP+L +AAT E V EALGG +MH Sbjct: 181 IAVVMGPCTAGGAYIPALCDEAVIVKEQGYMYLGGPELTFAATGETVDAEALGGAKMHCS 240 Query: 241 VSGVTDHLAENDAHAIAITREIVASLGEIPRQTRTVAPAREPHFDPNEIYGLISSDPRIP 300 VSGVTDH+AE+D HA+AITREIV LGE P+ T P+ P FDP EIYG+IS D +IP Sbjct: 241 VSGVTDHIAEDDRHALAITREIVRDLGEQPKPRWTRQPSVPPRFDPREIYGIISRDTKIP 300 Query: 301 TNNRDVLARLVDGSEFHEFKPLYGDTLVTGFARIMGFEIGILCNNGVLFSESALKATHFI 360 T+ R++LAR VD S F EFKP+YGDTL+TGFARI G E+GIL N GVLF +SA+KA HFI Sbjct: 301 TDTREILARFVDDSRFQEFKPMYGDTLLTGFARIHGHEVGILANQGVLFPDSAMKAAHFI 360 Query: 361 ELCCKRDIPLLFMADVTGFMVGREAEEGGITKNGAKMITAMASANVPKYTLIMGNAYGAG 420 +LCC+RDIPLLFMADVTGFMVGR AE+ GI K GAKMITAMASANVPKYT+IMG +YGAG Sbjct: 361 DLCCQRDIPLLFMADVTGFMVGRAAEQAGIAKAGAKMITAMASANVPKYTIIMGASYGAG 420 Query: 421 YLAMCGRAFRPNAMMMWPNARSAIMGPDQAATTLAMVRDEVHKREGTSWTDAEREAYMAP 480 YLAMCGR F P AM WP R+AIMGPDQAAT +A+VR +++K EG WT E EA+ AP Sbjct: 421 YLAMCGRPFNPTAMFAWPTGRAAIMGPDQAATVMALVRKQINKTEGKEWTPEEEEAFKAP 480 Query: 481 TRRTFEDFANAYNFARNTWCDMVIDPLETRSVMALLLDLAGRVPRQHTDFGVFRM 535 R+ +EDF A NF+ N W D +IDP+ETR M LLLDLA R + T FG+FR Sbjct: 481 VRKIYEDFQPATNFSSNLWVDGIIDPVETRDAMGLLLDLASRTAAKPTPFGIFRF 535 >ref|ZP_01037645.1| probable propionyl-CoA carboxylase (beta subunit) [Roseovarius sp. 217] gb|EAQ23832.1| probable propionyl-CoA carboxylase (beta subunit) [Roseovarius sp. 217] Length = 532 Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/534 (64%), Positives = 419/534 (78%), Gaps = 4/534 (0%) Query: 4 MKSDVVTSTEDYARNRSAYTERVADLRRRRAMAALGGPERARKLHKERDQLLPRERIAAL 63 MKS + T ++D+ N + Y E+V +L R +GGPE+AR+ H + ++LPRERI L Sbjct: 1 MKSLLDTRSDDFRANDAVYREKVGELHALRLQQRVGGPEKARERHVSKGKILPRERIERL 60 Query: 64 IDPGSPFLEFCQLAGDGLYEGVPPGGSIITGVGMISDRPCMIIANEPTVKGGTYYGITCK 123 IDPG+PFLE +LAG Y+GVPPG IITG+G+I R CMIIAN+ TVKGGTY+G+TC+ Sbjct: 61 IDPGTPFLEIGELAGLDKYDGVPPGAGIITGIGVIEGRHCMIIANDATVKGGTYFGMTCR 120 Query: 124 KHVRAQRFAWQHRLPCVTLVQSGGANLPDQPNIFPDDGQFGSIFYNQVRMSAEGIPQIAV 183 KHVRAQR AW +RLP +TLV SGGA LP+Q NIFPDDGQFGSIF+ Q+ MS +G+PQIAV Sbjct: 121 KHVRAQRIAWNNRLPVITLVDSGGAFLPEQANIFPDDGQFGSIFHQQIGMSGDGVPQIAV 180 Query: 184 VHGPSTAGGAYIPALSDETVIIRNQGAMFLGGPQLVYAATREEVGIEALGGGEMHSRVSG 243 V GP TAGGAYIPAL DE VI+R QG M+LGGP+L +AAT E V E LGGG+MHS VSG Sbjct: 181 VMGPCTAGGAYIPALCDEVVIVRGQGFMYLGGPELTFAATGETVDAETLGGGKMHSSVSG 240 Query: 244 VTDHLAENDAHAIAITREIVASLGE--IPRQTRTVAPAREPHFDPNEIYGLISSDPRIPT 301 VTDHLAE+DAHA+AITREIV+ LGE +PR+T + P R P + EIYGL+S DP++PT Sbjct: 241 VTDHLAEDDAHALAITREIVSHLGEKALPRKT-PITP-RPPAYPVEEIYGLVSRDPKVPT 298 Query: 302 NNRDVLARLVDGSEFHEFKPLYGDTLVTGFARIMGFEIGILCNNGVLFSESALKATHFIE 361 +NR+++ARLVD S+FHEFKPLYGDT++TG+ RI G E+GIL N GVLF E+ALKATHFI Sbjct: 299 DNREIVARLVDDSDFHEFKPLYGDTIMTGWGRIHGHEVGILANTGVLFVEAALKATHFIN 358 Query: 362 LCCKRDIPLLFMADVTGFMVGREAEEGGITKNGAKMITAMASANVPKYTLIMGNAYGAGY 421 LC +RDIPLLF+ADV GFMVGRE E+ GI K GAKMITAM+SA VPK+T+I G +YGAGY Sbjct: 359 LCVQRDIPLLFLADVNGFMVGREVEQMGIAKAGAKMITAMSSARVPKFTIITGGSYGAGY 418 Query: 422 LAMCGRAFRPNAMMMWPNARSAIMGPDQAATTLAMVRDEVHKREGTSWTDAEREAYMAPT 481 LAM GR F+P+AM WP RSAIMGP+QAA+ LA VR ++++REG WT E EA+ AP Sbjct: 419 LAMLGRPFQPDAMFAWPTGRSAIMGPEQAASVLAQVRAQINEREGKKWTPEEEEAFKAPI 478 Query: 482 RRTFEDFANAYNFARNTWCDMVIDPLETRSVMALLLDLAGRVPRQHTDFGVFRM 535 R+ +EDF AYNFA N W D VI+P ETR VMAL+LDLA R PR T FGVFRM Sbjct: 479 RKEYEDFQGAYNFASNLWIDSVIEPCETRDVMALILDLASRRPRVETHFGVFRM 532 >ref|ZP_01000035.1| Carboxyl transferase [Oceanicola batsensis HTCC2597] gb|EAQ02506.1| Carboxyl transferase [Oceanicola batsensis HTCC2597] Length = 535 Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/535 (63%), Positives = 418/535 (78%) Query: 1 MAIMKSDVVTSTEDYARNRSAYTERVADLRRRRAMAALGGPERARKLHKERDQLLPRERI 60 M MKS + T ++D+ N + Y E+++DL R + +GGP++AR H E+ ++LPRERI Sbjct: 1 MTKMKSLLDTGSDDFRANDAHYREKLSDLHALRLLQRVGGPKKARDRHVEKGKILPRERI 60 Query: 61 AALIDPGSPFLEFCQLAGDGLYEGVPPGGSIITGVGMISDRPCMIIANEPTVKGGTYYGI 120 LIDPG+PFLE +LAG Y GVPPG IITG+G+I R CMIIAN+ TVKGGTY+G+ Sbjct: 61 ERLIDPGTPFLELGELAGLNKYNGVPPGAGIITGIGVIEGRQCMIIANDATVKGGTYFGM 120 Query: 121 TCKKHVRAQRFAWQHRLPCVTLVQSGGANLPDQPNIFPDDGQFGSIFYNQVRMSAEGIPQ 180 T +KHVRAQ+ AW++RLP +TLV SGGA LPDQ NIFPD+GQFGSIF+ QV MS +G+PQ Sbjct: 121 TSRKHVRAQKIAWKNRLPVITLVDSGGAFLPDQENIFPDEGQFGSIFHQQVGMSGDGVPQ 180 Query: 181 IAVVHGPSTAGGAYIPALSDETVIIRNQGAMFLGGPQLVYAATREEVGIEALGGGEMHSR 240 IAVV GP TAGGAYIPAL DE VI+R QG M+LGGP+L +AAT E+V E LGGG+MHS Sbjct: 181 IAVVMGPCTAGGAYIPALCDEVVIVRGQGFMYLGGPELTFAATGEKVEAEELGGGKMHSS 240 Query: 241 VSGVTDHLAENDAHAIAITREIVASLGEIPRQTRTVAPAREPHFDPNEIYGLISSDPRIP 300 VSGVTDHLAE+DAHA+AITREIV+ LGE P+ +T R P + EIYGLIS DP++P Sbjct: 241 VSGVTDHLAEDDAHALAITREIVSHLGEKPQPRKTPEAPRAPAYPVEEIYGLISRDPKVP 300 Query: 301 TNNRDVLARLVDGSEFHEFKPLYGDTLVTGFARIMGFEIGILCNNGVLFSESALKATHFI 360 T+NR+++ARLVD S+FHEFKPLYGDT++TG+ RI G E+GIL N GVLF E+ALKATHFI Sbjct: 301 TDNREIVARLVDESDFHEFKPLYGDTIMTGWGRIHGHEVGILANTGVLFVEAALKATHFI 360 Query: 361 ELCCKRDIPLLFMADVTGFMVGREAEEGGITKNGAKMITAMASANVPKYTLIMGNAYGAG 420 LC +RDIPLLF+ADV GFMVGRE E+ GI K GAKMITAM+SA VPK+T+I G +YGAG Sbjct: 361 NLCVQRDIPLLFLADVNGFMVGREVEQMGIAKAGAKMITAMSSARVPKFTIITGGSYGAG 420 Query: 421 YLAMCGRAFRPNAMMMWPNARSAIMGPDQAATTLAMVRDEVHKREGTSWTDAEREAYMAP 480 YLAM GR F+P+AM WP RSAIMGP+QAA+ LA VR ++++REG +WT E EA+ AP Sbjct: 421 YLAMLGRPFQPDAMFAWPTGRSAIMGPEQAASVLAQVRAQINEREGRNWTAEEEEAFKAP 480 Query: 481 TRRTFEDFANAYNFARNTWCDMVIDPLETRSVMALLLDLAGRVPRQHTDFGVFRM 535 R +EDF AYNFA N W D VI+P ETR VMAL+LD+ R P+ T FGVFRM Sbjct: 481 IREEYEDFQGAYNFASNLWIDSVIEPCETRDVMALMLDVTSRRPKVETYFGVFRM 535 >ref|YP_004387536.1| methylcrotonoyl-CoA carboxylase [Alicycliphilus denitrificans K601] gb|AEB84020.1| Methylcrotonoyl-CoA carboxylase [Alicycliphilus denitrificans K601] Length = 526 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/524 (63%), Positives = 401/524 (76%) Query: 12 TEDYARNRSAYTERVADLRRRRAMAALGGPERARKLHKERDQLLPRERIAALIDPGSPFL 71 T+D N AY + DL R A LGG E ARK H ER++LL RERI L+D GSPF+ Sbjct: 3 TKDSDVNAQAYRLLIEDLAEARQRAWLGGSESARKKHHERNRLLVRERIDLLLDEGSPFV 62 Query: 72 EFCQLAGDGLYEGVPPGGSIITGVGMISDRPCMIIANEPTVKGGTYYGITCKKHVRAQRF 131 E +LAG+G+Y+GV PG I+TGVG+I R CM+IAN+PTVKGGTY+G+TC+KHVRAQ+F Sbjct: 63 ELAELAGEGMYDGVAPGAGIVTGVGLIQQRACMVIANDPTVKGGTYFGMTCRKHVRAQQF 122 Query: 132 AWQHRLPCVTLVQSGGANLPDQPNIFPDDGQFGSIFYNQVRMSAEGIPQIAVVHGPSTAG 191 A QHRLPC+TLV SGGA LPDQ NIFPDDG FGSIF NQV MSA+GI QIAVV G TAG Sbjct: 123 ALQHRLPCITLVDSGGAFLPDQANIFPDDGLFGSIFRNQVEMSAQGIAQIAVVLGACTAG 182 Query: 192 GAYIPALSDETVIIRNQGAMFLGGPQLVYAATREEVGIEALGGGEMHSRVSGVTDHLAEN 251 GAYIP+L DE VI+R +G MFLGGPQLV AAT E + E LGG EMHSRVSGVTDH+AEN Sbjct: 183 GAYIPSLCDEIVIVRGKGFMFLGGPQLVQAATGEVIDAERLGGAEMHSRVSGVTDHIAEN 242 Query: 252 DAHAIAITREIVASLGEIPRQTRTVAPAREPHFDPNEIYGLISSDPRIPTNNRDVLARLV 311 D A+AI R +V L +P R PA+ P +IY L+S++P+ PT R+VL L+ Sbjct: 243 DGQAMAIARRLVGELPPMPPPLRDRIPAQGPARPATDIYELVSANPKKPTPTREVLRCLL 302 Query: 312 DGSEFHEFKPLYGDTLVTGFARIMGFEIGILCNNGVLFSESALKATHFIELCCKRDIPLL 371 DG E EFK +G TL+TGFARI G+++G+L N+GVLF+ESA+KATHFI+LCCKR+IPLL Sbjct: 303 DGGELTEFKAEFGPTLITGFARIGGWQVGVLANDGVLFTESAVKATHFIDLCCKRNIPLL 362 Query: 372 FMADVTGFMVGREAEEGGITKNGAKMITAMASANVPKYTLIMGNAYGAGYLAMCGRAFRP 431 F+ADV GFMVG EAE+GGI K GA+ ITAM+SA VPK+T+I G +YGAG LAMCGRAFRP Sbjct: 363 FLADVAGFMVGVEAEQGGIAKAGARFITAMSSAKVPKFTVITGGSYGAGNLAMCGRAFRP 422 Query: 432 NAMMMWPNARSAIMGPDQAATTLAMVRDEVHKREGTSWTDAEREAYMAPTRRTFEDFANA 491 NAM MWPN R+AIMGP+QAATTLAMV+ + + +G W+ E EA+ AP R+ +E FA A Sbjct: 423 NAMFMWPNGRAAIMGPEQAATTLAMVKRQNLQAKGLDWSAEEEEAFKAPIRQQYESFAAA 482 Query: 492 YNFARNTWCDMVIDPLETRSVMALLLDLAGRVPRQHTDFGVFRM 535 NFAR+ W D ++DP+ETR + LLLDLA RVP + T FGVFRM Sbjct: 483 RNFARHLWVDGILDPVETRDTLTLLLDLAARVPAESTQFGVFRM 526 >ref|YP_004127503.1| methylcrotonoyl-CoA carboxylase [Alicycliphilus denitrificans BC] gb|ADV00616.1| Methylcrotonoyl-CoA carboxylase [Alicycliphilus denitrificans BC] Length = 526 Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/524 (62%), Positives = 400/524 (76%) Query: 12 TEDYARNRSAYTERVADLRRRRAMAALGGPERARKLHKERDQLLPRERIAALIDPGSPFL 71 T+D N AY + DL R A LGG E ARK H ER++LL RERI L+D GSPF+ Sbjct: 3 TKDSDVNAQAYRLLIEDLAEARQRAWLGGSESARKKHHERNRLLVRERIDLLLDEGSPFV 62 Query: 72 EFCQLAGDGLYEGVPPGGSIITGVGMISDRPCMIIANEPTVKGGTYYGITCKKHVRAQRF 131 E +LAG+G+Y+GV PG I+TGVG+I R CM+IAN+PTVKGGTY+G+TC+KHVRAQ+F Sbjct: 63 ELAELAGEGMYDGVAPGAGIVTGVGLIQQRACMVIANDPTVKGGTYFGMTCRKHVRAQQF 122 Query: 132 AWQHRLPCVTLVQSGGANLPDQPNIFPDDGQFGSIFYNQVRMSAEGIPQIAVVHGPSTAG 191 A QHRLPC+TLV SGGA LPDQ NIFPDDG FGSIF NQV MSA+GI QIAVV G TAG Sbjct: 123 ALQHRLPCITLVDSGGAFLPDQANIFPDDGLFGSIFRNQVEMSAQGIAQIAVVLGACTAG 182 Query: 192 GAYIPALSDETVIIRNQGAMFLGGPQLVYAATREEVGIEALGGGEMHSRVSGVTDHLAEN 251 GAYIP+L DE VI+ +G MFLGGPQLV AAT E + E LGG EMHSRVSGVTDH+AEN Sbjct: 183 GAYIPSLCDEIVIVCGKGFMFLGGPQLVQAATGEVIDAERLGGAEMHSRVSGVTDHIAEN 242 Query: 252 DAHAIAITREIVASLGEIPRQTRTVAPAREPHFDPNEIYGLISSDPRIPTNNRDVLARLV 311 D A+AI R +V L +P R PA+ P +IY L+S++P+ PT R+VL L+ Sbjct: 243 DGQAMAIARRLVGELPPMPPPLRDRIPAQGPARPATDIYELVSANPKKPTPTREVLRCLL 302 Query: 312 DGSEFHEFKPLYGDTLVTGFARIMGFEIGILCNNGVLFSESALKATHFIELCCKRDIPLL 371 DG E EFK +G TL+TGFARI G+++G+L N+GVLF+ESA+KATHFI+LCCKR+IPLL Sbjct: 303 DGGELTEFKAEFGPTLITGFARIGGWQVGVLANDGVLFTESAVKATHFIDLCCKRNIPLL 362 Query: 372 FMADVTGFMVGREAEEGGITKNGAKMITAMASANVPKYTLIMGNAYGAGYLAMCGRAFRP 431 F+ADV GFMVG EAE+GGI K GA+ ITAM+SA VPK+T+I G +YGAG LAMCGRAFRP Sbjct: 363 FLADVAGFMVGVEAEQGGIAKAGARFITAMSSAKVPKFTVITGGSYGAGNLAMCGRAFRP 422 Query: 432 NAMMMWPNARSAIMGPDQAATTLAMVRDEVHKREGTSWTDAEREAYMAPTRRTFEDFANA 491 NAM MWPN R+AIMGP+QAATTLAMV+ + + +G W+ E EA+ AP R+ +E FA A Sbjct: 423 NAMFMWPNGRAAIMGPEQAATTLAMVKRQNLQAKGLDWSAEEEEAFKAPIRQQYESFAAA 482 Query: 492 YNFARNTWCDMVIDPLETRSVMALLLDLAGRVPRQHTDFGVFRM 535 NFAR+ W D ++DP+ETR + LLLDLA RVP + T FGVFRM Sbjct: 483 RNFARHLWVDGILDPVETRDTLTLLLDLAARVPAESTQFGVFRM 526